Mbor006461.1
Basic Information
- Insect
- Marronus borbonicus
- Gene Symbol
- -
- Assembly
- GCA_902655005.1
- Location
- LR737380.1:23752429-23756640[+]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 21 8 1.9e+04 -5.2 2.8 19 26 140 147 137 164 0.65 2 21 0.0063 15 5.8 0.8 5 26 173 193 169 203 0.89 3 21 6.2e-05 0.15 12.2 2.3 14 41 209 233 200 235 0.86 4 21 0.0035 8.3 6.6 2.0 17 40 240 260 236 262 0.87 5 21 0.0049 12 6.1 5.4 1 36 253 283 253 289 0.81 6 21 1.1e-06 0.0026 17.8 5.1 6 41 330 362 325 364 0.88 7 21 0.00081 1.9 8.6 1.8 14 38 365 386 362 391 0.82 8 21 0.057 1.4e+02 2.7 2.7 17 40 396 416 387 418 0.80 9 21 0.035 83 3.4 3.0 6 41 414 444 409 446 0.69 10 21 0.012 29 4.9 4.5 14 40 448 471 440 477 0.81 11 21 0.018 42 4.3 5.2 2 38 465 500 464 501 0.81 12 21 0.1 2.4e+02 1.9 3.2 16 26 505 515 496 526 0.79 13 21 0.13 3e+02 1.6 0.9 15 39 531 552 523 557 0.70 14 21 0.00089 2.1 8.5 4.8 14 40 557 580 550 583 0.82 15 21 0.0016 3.7 7.7 1.2 16 41 586 608 581 610 0.81 16 21 0.00056 1.3 9.1 6.2 5 41 604 636 602 638 0.82 17 21 0.0066 16 5.7 0.9 16 40 640 665 635 667 0.81 18 21 0.00045 1.1 9.5 3.9 12 39 664 688 658 691 0.74 19 21 0.067 1.6e+02 2.5 1.1 14 30 693 709 687 719 0.77 20 21 0.0011 2.7 8.2 1.1 13 41 720 745 711 746 0.80 21 21 0.0037 8.7 6.5 0.7 6 39 742 774 737 776 0.76
Sequence Information
- Coding Sequence
- ATGTCAATAAAGAAGGAAAGCGATCTCAACGATCTTTCAGCTGGCCCTGTATATAGTGTAGCTGACTGCTGGAGCACATGTTTACAAGAACAGCTAACAAATTCCTCGTATAGTGATCCTATAAAATTCTCTGACAAATTACCAGCCTGTGTATCTGAAACGaaCTGGGCAAAGGAGATTGCGCCTTCATCAGAGCAAGCACGTCCATTAAAAGTGGAAGCAAATGAAATACAAAGTTCTTCGAGTGTAACTGTGGATCCTGCAACAACTGTCTTAGCAGGATGTGATGAAACAGTAGAGAAAGTTGTTTTCTGTACAAAATTTGAGGAAACAGAAACACAGATTTTATCTGAATATGCCCCATCTACTTCAGGTGCACCACAACTGCAGACATTAGATAATCTTTGTAAAAATGGCTGCCAGGTctgtaaagaaaaattatgcGAGCATATCGATGGAAAATCCTTTCAATGTTCGGTATGCCTTCAACAGTTTCCGATAATAGCTGAGCTAACTGCACATGTGCGAATTCATACTGAGGAAAAACGTTATGTTTGTGATTTTTGCGAGAAGAGTTATATAGATGAAAACGACTTGTTAATGCATACATGTTCACGTACAGGAGAGAAGTCATTTCCATGTAGATATTGCGATAAAAAGTTTTCTACAACACATCTCTTGCGTTCCCATTTAAAAAGACATAATGTCAATAAACCTTGGGGATGTCGAATCTGTAACACATCATATACACAATCTTCTCACCTTTGGGCTCATATGAGAGCACATGCtgggaagaaatattgttgtaaattatgtggTGAAAAGTTTACCTGGCGTTCCGCTTTTAATGTACATATGAGAAGACATAATGGGGATAAACTCTTGCGAGGAAAAATCCTTTCAACAGATACGAAGATACATTCTGCAAAGAAGCGCTCTGGTAAATTATGTGATAAGAAGTTTGCAGAATCTTCCTCTTTAAATGCACATAAAAAAAGACATACTACTAGCAATAAGTTTTGGCAatgtgaaatttgtaaaaaatcatataCAAGATCTTCTAACCTTTCAATGCACATGAAAACGCACACTGCAAAGAAGCTTTCTTGTAACTTGTGTGGTAAGAAGTTTACGCAAACTTCCTCTTTAAGTGCACATACGAAAAAACATTCTGGCGATGAACTTTTgcaatgtaaaatttgtaacaaatcgTATGTGCAATTTTCTCACCTTTTAGCGCACATGAGGATACATTATGGGGAGCagttttcttgtaaattctgCAAGAAAAGGTTTGCACGGGCTTACACATTAAATGCACATATGAAAAGACATACTGGCAAAGAGCTTTGGCGGTGTCAAATCTGTAACAAATCATACATAACGTCTAGTCTCCTTAAACGACACATTAAGATACATACTGGAGAGAGGTTTCCTTGTAAAGtatgtaataaagaatttacacGGTCTTGCTCTTTAAGTCTACACATGAAAAAACATACTGGTGATGAACCTTGGAGATGTAAAATCTGTAACAAATCATTTTTAACTTATCAGTCTTTTTCGGGACACATGAATATACATACTGGAGAGAGATATTCGTGTAAGTTATGTGATAAAAAGTTTACATGGGTTAGCTCTTTAGGTTTACATATGAAAAGACATAATAATGTGCGCTGgcaatgtaaaatttgtaacaaatcaTATACACAACGTTCCACTTTAAGAATGCATATGAGGATGCATGCTGGAGAGAAATATTCTTGTAAATTATGTGATAAAGAGTTTAAAAGGTCCGTCTCTCTGAAAGCACATATGAAAAGACATACTGGCGAGAAGCTTTGGAGTTGCAAAATCTGTAACAAATCATATACAACATCTTCTCATCTTTCAAACCACTTGGAGACGCACGGAGAGAAGTTTGCCTGTAAATTATGTGATAAAAAGTTTACATGGTCTGCCACCTTGAATTCACATATGAAAAATCATATTACCGATAAGCCTTGGCAAtgtaaaatttgcaacaaatcATATAAACAATCTTCCTCTTTAAGTGTACATATGAAACTTCATACTGGAGAGAAGTATTCTTGTGAATTGTGTGATAAGAAGTTTACACGGCCTGGTTCTTTAAATAGACATAAGAGAAAACATACTGGCGATGAACTTTGGCAATGTCGAGTCTGTAGCAAATCATATTCACAATTTTCTCAACTTTCAGCCCATATGAAGACACACACTGAAGAGAAGTTTTcctgtaaattttgtaaacagaaatttacatattatcCTCAGTTGTCAGCCCACATGCAGGAACATATGGAAAAATAA
- Protein Sequence
- MSIKKESDLNDLSAGPVYSVADCWSTCLQEQLTNSSYSDPIKFSDKLPACVSETNWAKEIAPSSEQARPLKVEANEIQSSSSVTVDPATTVLAGCDETVEKVVFCTKFEETETQILSEYAPSTSGAPQLQTLDNLCKNGCQVCKEKLCEHIDGKSFQCSVCLQQFPIIAELTAHVRIHTEEKRYVCDFCEKSYIDENDLLMHTCSRTGEKSFPCRYCDKKFSTTHLLRSHLKRHNVNKPWGCRICNTSYTQSSHLWAHMRAHAGKKYCCKLCGEKFTWRSAFNVHMRRHNGDKLLRGKILSTDTKIHSAKKRSGKLCDKKFAESSSLNAHKKRHTTSNKFWQCEICKKSYTRSSNLSMHMKTHTAKKLSCNLCGKKFTQTSSLSAHTKKHSGDELLQCKICNKSYVQFSHLLAHMRIHYGEQFSCKFCKKRFARAYTLNAHMKRHTGKELWRCQICNKSYITSSLLKRHIKIHTGERFPCKVCNKEFTRSCSLSLHMKKHTGDEPWRCKICNKSFLTYQSFSGHMNIHTGERYSCKLCDKKFTWVSSLGLHMKRHNNVRWQCKICNKSYTQRSTLRMHMRMHAGEKYSCKLCDKEFKRSVSLKAHMKRHTGEKLWSCKICNKSYTTSSHLSNHLETHGEKFACKLCDKKFTWSATLNSHMKNHITDKPWQCKICNKSYKQSSSLSVHMKLHTGEKYSCELCDKKFTRPGSLNRHKRKHTGDELWQCRVCSKSYSQFSQLSAHMKTHTEEKFSCKFCKQKFTYYPQLSAHMQEHMEK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00956452;
- 90% Identity
- iTF_00956452;
- 80% Identity
- iTF_00956452;