Mbor018819.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Marronus borbonicus
Gene Symbol
Hr39
Assembly
GCA_902655005.1
Location
LR737391.1:9678370-9700603[-]

Transcription Factor Domain

TF Family
SF-like
Domain
zf-C4|SF-like
PFAM
AnimalTFDB
TF Group
Zinc-Coordinating Group
Description
The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 0.58 3.7e+03 -2.9 7.7 97 187 54 155 3 213 0.40
2 3 8.8e-09 5.6e-05 22.8 0.1 1 61 290 349 290 409 0.63
3 3 5e-74 3.1e-70 237.7 0.3 201 408 397 616 348 616 0.87

Sequence Information

Coding Sequence
ATGACGGAGGTACCCGAAAACCTATCTTTATCACTGAATAAACACACTCAAGCGAACCTCCATGATTCCAAGGAAAGTCCGATCATGCGATTGAGTCAAGCGCCAGTCGTCAGCAGTTATTCGTTACACAGCACTCCCAGTAATTCCCCTCTGCTCAGCCAACGTCAGTCAACGACCGTCACGAACGTTCCAATACTAGGTCACAAAGATTTCATCCACAAGGATATCATGCACAAGGCTCTCAACGTTCCCCCTACACCGAGTCCTGATTCGGCCATCCATTCCGCATACAGTGTATTCAGCTCGCCAAATCAGAGTCCTCTAACCCAGAGGCATGTCACGCTTACACCTAATCTAAGTAGAAACAACAGCGACGCCTCACATTCTAGCTGTTATAGCTGCAGCAGCGTTTCAGTATCGGTTTCTCCTACGCAGCAGTTTTCGCCGACGCACAGTCCAATTCAGggtCGGCACGCGCCAAATCTTCATAACAGCCCTCTCCATCACAACGTACTTTTCAGGAGTGTTCAAGAGGATGCTTGCGTGCAGTATACCACTGAACACGACAATCTAGAGGAAAACGAAGATAAGACTGGGTTAGTTCACCCACCATTGACAGCTCAAACGGGCATTTCCCGACAGCAGCTCATCAACAGTCCGTGTCCGATCTGTGGGGACAAAATATCCGGGTTCCATTACGGCATCTTTAGTTGTGAATCGTGCAAGGGCTTTTTCAAACGGACAGTGCAGAATAGGAAAAACTATGTGTGTTTAAGAGGAGCAGCGTGTCCGGTCACAGTAGCAACGCGAAAAAAATGCCCCGCATGCCGTTTTGACAAGTGTCTCAAATGTGGTATGAAATTAGaagCGATAAGGGAAGATCGTACTAGAGGTGGCCGTTCCACATATCAATGTTCATATTCCTTGCCTCCTTCTCTGGCCGGCCATTCGGAACTGCGGGCAAGTTCTAGTGATCTTCGTCACCAAATCGGAGATCCGCACCTCACCGTTAAGCTGGAACCTCCCGATACAGGAATCTCGCATTCGAAACGGCTCAATTCTAATTCCAGGCACGGTGTCCCTCCGTTATTGCAAGAAATAATGGATGTGGAACACCTGTGGCATTACAATGAATCAGAACTGAATAAGCTCAATTCCGAAGGGAATTCAAAAGATGGTTCCAGTAGCTCAGTTCCTAACCTTTCTAATCATCCACTGCTGGCTGGAACGGGACTTGCCGGTTCAGCTGATACAAATCCTGATTTCGTTGCGAACTTGTGCAATATCGCGGATCATAGATTGTACAAAATCGTCAAGTGGTGCAAAAGCTTGCCTCTCTTTAAGAATATATCGATTGACGATCAAATTTGTCTACTTATTAACTCCTGGTGTGAACTTCTCTTGTTCTCGTGTTGTTTTCGATCGATGTCATGTCCGGGCGAGATCAGGATATCTCTGGGAAAAAGTATTACTTTGGCGCAAGCTCGTGATTTGGGAATGCAGTCCTGTATCGAACGTATGCTCAACTTCACGAAACAATTACGGCGACTACGAGTCGACAAATATGAATATGTTGCCATGAAGGTTATCGTCTTGCTTACATCGGATACGAGTGAATTGCGGGAAGCCGAAAAGGTACGTGCGTCTCAAGAGAAAGCTTTACAAGCGTTACAAGATTACACCTTAGCTCATTATCCAGAAAGTCCTGCTAAATTCGGGGAACTACTATTAAGAATTCCAGAGTTACAAAGAACTTGTCAGgCAGGGAAGGAGTTGTTAACGATAAAAACAAAGGATGGAGAAGGTCCGAGTTTCAATCTACTGATGGAGTTACTCCGAGGGGACCACTAG
Protein Sequence
MTEVPENLSLSLNKHTQANLHDSKESPIMRLSQAPVVSSYSLHSTPSNSPLLSQRQSTTVTNVPILGHKDFIHKDIMHKALNVPPTPSPDSAIHSAYSVFSSPNQSPLTQRHVTLTPNLSRNNSDASHSSCYSCSSVSVSVSPTQQFSPTHSPIQGRHAPNLHNSPLHHNVLFRSVQEDACVQYTTEHDNLEENEDKTGLVHPPLTAQTGISRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCLRGAACPVTVATRKKCPACRFDKCLKCGMKLEAIREDRTRGGRSTYQCSYSLPPSLAGHSELRASSSDLRHQIGDPHLTVKLEPPDTGISHSKRLNSNSRHGVPPLLQEIMDVEHLWHYNESELNKLNSEGNSKDGSSSSVPNLSNHPLLAGTGLAGSADTNPDFVANLCNIADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLLFSCCFRSMSCPGEIRISLGKSITLAQARDLGMQSCIERMLNFTKQLRRLRVDKYEYVAMKVIVLLTSDTSELREAEKVRASQEKALQALQDYTLAHYPESPAKFGELLLRIPELQRTCQAGKELLTIKTKDGEGPSFNLLMELLRGDH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01498957;
90% Identity
iTF_00434158;
80% Identity
iTF_00956337;