Mbor000735.1
Basic Information
- Insect
- Marronus borbonicus
- Gene Symbol
- Rel
- Assembly
- GCA_902655005.1
- Location
- LR737392.1:6637332-6652940[+]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.1e-39 5.4e-36 124.2 0.5 1 168 61 252 61 253 0.90 2 3 0.62 3e+03 -1.9 0.1 117 151 452 485 418 505 0.69 3 3 1.7 7.9e+03 -3.3 0.1 37 83 532 577 530 598 0.49
Sequence Information
- Coding Sequence
- atgattgGCTACCCATTCACATTAACGCCACCGTCTTCAAGTGAAGATTCACCACAGAGTTTTAATATGCACTCGCCGAATCGTTATAATTTCCAACAAGGAAATATCCACACGCAGCCATTTATAATTTCAACGGCTCCTCAATATGAAATACCCATGACAAaaccAAAACCACCATACCTGACGATAGTTGAACAACCCATTGACAAGTTCAGATTCCGTTACAAATCCGAAATGGCTGGAACACATGGAAGTCTAACAGGCATAAATTCGGATAAAACACGTAAACAAACGTACCCAACAGTTAAAttgaataatttctttgaacGTGATGCAATTATCCGATGTTCGTTGTACCAAAATGGATCTTCTGATGATCGTCAACCCCATGCTCACAGATTAATAATGAAGCACGGTCAAGAGGAAAGAGATGATCCACATGATATTGTTGTTGCAAAAGATAACAATTATGAAGcatcGTTCCATAGCATGGGTATTATACATACAGCAAAAAAGCATATTGTCGGGGaattaaaacgaaagaaaacacTTCTTAAACAAGAAGAAATTGCCAGATCAGAAGGACTGAAAAGGTCTTTAACGATTAAAGAGGAAGTAGAACTTGGTACAAGCGCCGATGAAGAATGCaaatcgataaatttaaatatcgtcTGTCTAAGATTTGATGCGTTTAGGAAGGAAAATGATATTTTACGCCTAATATGTCCGCCAATTTATTCacatgcaataaataatttaaaaAGTGCATTAACAGGCGAATTGAAGATTGTTCGGATGGATCATAGCAGTAGCCCTGCCAAAGGCAACCGAGAAATATTTATGCTTGTTGAAAAAGTGACGAAAAaaaacataaaaatcagATTCTTCGAAttagatgaagaagaaaatgaaatatggtCGGAATATGGAAAATTTAACGATTTAGACGTGCATCACCAGTACGCAATCGTATTTAGAACGCCTCCTTATAAAGATTTGAATATAGAGGAACAGAAAAAGGTTTTCATTGAGTTAGAAAGACCTTCAGACGGTAGTAGAAGTGAACCACGAGAATTCACTTACATCCCCggtcaaaatttcaaaactggTATGAAGAGACCTCGCACAAGCATGTATTCGTCAAGCGAATATTCTTCAACGTCACTTAACAGTGCCGAATTGCCTACAACATTAGAAGGATTACAAATGAACGTTGCGTATGAAGTCACAAGCAGTGACCTGCAAGAAGCCATAAAGAATATCGATTCTGATGAATTTCAGAAGATATTCGAAGAGAATTGGCAGGAATTCTACGGTGCTCCCGCTGTAGGCTTACAGACAGactctggaaaaaaaaataaatccaaGAAACTAGACTACTCTAACGTTCAagacaaagataaaaatatagtGAACAGagtttttatagaatttaaaaatttcttgagGACGAATcccaaaaatgaagaaatcataAGTATGTTGCAGAATTTATTCACGAACTACGTGAACGATGCGAAAGAAAATGCTTTGCATATATGCACTtcagaaggaaataaaaaacttttagaatattttctcaatattgtaaatacatacaaacagtttaaaatcttaaattttcgCAACAACAACTTGGAAACAATAGTGCATCTCGCGATGCAGTCAAATATTGATGTTATAACATTGGTATTGAAGTCTCAATGCGATGTGGGTATGAAAGATATAAATGGTAACACTCCCCTGCATGTTGCAGTTATGAAAAATCAAAGTATCGTAGCTATAGATACGCTATTACGAGCAGTTCGTTCCGAGTTATTTATTAACGCAGAAAATAATGATAACCTTACCGCTTTACATATGGCGATTAAAATGAATAAGGTAGAATACGTTGATCTCCTGTATAAGTATAAAGCAGATGTCAacttaattgataaaaaaactGGTAGAAACAGTTTGCACATTGCAATAGCAGAACAGGCTACTAAGATAGTAAAGTTATTGCTGGAAAAAACGAATATCGATATTCTGAAAGAAGATTTCAGCGGCCGCACTCCGTTAAGCATGGCAAAACATCTCATGCAAGACGGAGAGCCAGAAAGAATCCAAATCTACGATATGATTGAGAGGAAATTGaaATCACGAGGGTTGCACGCAGATTGCATTATTAAAGAGGAAGTAGAATCCGAAGAAGAAATGGAACTAGAAATAGTTGAAtgcaaaatcgaaaaattgacGATAGACGAACTTGAACCAATGTATACAAGCGTAAAAATTTCCACAGCTTTCATGGACAAAGTATCCAAAATATTGGATCAATCACAACGGTATTACCATTTAGCGGAAGTGATGAACTTGAAACACTTTCTCCATACTGATCTATTTATCAACTCAAAGAGTAAAAGCAAGGCATTGTTGCAGTACGCAGTGcgCGTACACGGGATGTGGACAGTACGTAATTTCTTGGAGAATTTGGGCGAAAAAGAAGCAGTAGAAATAATGGACAACATGGTAATGTCTATGAATATGGAGACGTAG
- Protein Sequence
- MIGYPFTLTPPSSSEDSPQSFNMHSPNRYNFQQGNIHTQPFIISTAPQYEIPMTKPKPPYLTIVEQPIDKFRFRYKSEMAGTHGSLTGINSDKTRKQTYPTVKLNNFFERDAIIRCSLYQNGSSDDRQPHAHRLIMKHGQEERDDPHDIVVAKDNNYEASFHSMGIIHTAKKHIVGELKRKKTLLKQEEIARSEGLKRSLTIKEEVELGTSADEECKSINLNIVCLRFDAFRKENDILRLICPPIYSHAINNLKSALTGELKIVRMDHSSSPAKGNREIFMLVEKVTKKNIKIRFFELDEEENEIWSEYGKFNDLDVHHQYAIVFRTPPYKDLNIEEQKKVFIELERPSDGSRSEPREFTYIPGQNFKTGMKRPRTSMYSSSEYSSTSLNSAELPTTLEGLQMNVAYEVTSSDLQEAIKNIDSDEFQKIFEENWQEFYGAPAVGLQTDSGKKNKSKKLDYSNVQDKDKNIVNRVFIEFKNFLRTNPKNEEIISMLQNLFTNYVNDAKENALHICTSEGNKKLLEYFLNIVNTYKQFKILNFRNNNLETIVHLAMQSNIDVITLVLKSQCDVGMKDINGNTPLHVAVMKNQSIVAIDTLLRAVRSELFINAENNDNLTALHMAIKMNKVEYVDLLYKYKADVNLIDKKTGRNSLHIAIAEQATKIVKLLLEKTNIDILKEDFSGRTPLSMAKHLMQDGEPERIQIYDMIERKLKSRGLHADCIIKEEVESEEEMELEIVECKIEKLTIDELEPMYTSVKISTAFMDKVSKILDQSQRYYHLAEVMNLKHFLHTDLFINSKSKSKALLQYAVRVHGMWTVRNFLENLGEKEAVEIMDNMVMSMNMET
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00626841;
- 90% Identity
- iTF_01120649; iTF_00956081;
- 80% Identity
- -