Mrel073498.1
Basic Information
- Insect
- Mantis religiosa
- Gene Symbol
- -
- Assembly
- GCA_030765055.1
- Location
- CM060960.1:4802670-4810336[+]
Transcription Factor Domain
- TF Family
- zf-GAGA
- Domain
- zf-GAGA domain
- PFAM
- PF09237
- TF Group
- Zinc-Coordinating Group
- Description
- Members of this family bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 0.004 95 5.6 0.2 22 45 64 87 54 94 0.85 2 11 0.0091 2.2e+02 4.4 0.2 21 50 91 120 88 124 0.89 3 11 0.017 4e+02 3.6 0.3 21 48 120 147 115 154 0.81 4 11 0.0042 99 5.5 0.1 22 49 150 177 142 181 0.81 5 11 0.033 7.8e+02 2.6 0.2 21 45 178 202 172 207 0.87 6 11 0.00019 4.4 9.8 0.4 21 48 207 234 201 237 0.90 7 11 0.023 5.4e+02 3.1 0.1 21 46 236 261 234 265 0.88 8 11 0.00054 13 8.3 0.1 21 43 293 315 284 322 0.87 9 11 0.011 2.7e+02 4.1 0.0 22 45 322 345 316 350 0.86 10 11 0.01 2.4e+02 4.3 0.3 21 48 350 377 344 381 0.83 11 11 0.002 47 6.5 0.2 22 48 380 406 375 412 0.88
Sequence Information
- Coding Sequence
- ATGGAGAAGACAGCAGAGCTGAAATTAGACAACAACTCATCACCAGAGATTCCTCAAGGAAACAAATTCTCATCACGTTGGGGTGACATTTGGCAAGAATTTTTGGCACCTGACAATGGTTCCTCACCCAGCAACAATTGTTCTGCAACTCCAGTGGAGCCAAACTCCCAGACACCCAAGCCTGTCTTGGATAGACCTTACAGATGTGATGTGTGTGGAAAGGCATTCACACAGGCTCGTCATCTGACACGTCACAGCATGGTGCACACAGGGGAGAAGCCGTACAGCTGTAAGCAATGTTTAAAGAAATTCTCGCAACAGAGTGACCTCACTCGCCATGTCCGTCGCATTCATACCGCAGAGAAGCCCTACATCTGCAATATCTGCATGAAAGGCTTCGCTCAACGAGGCGACTTCATCAGACACACCCAACGAGTTCATGCAGAAAACAAGCCACACGTTTGCTCCATCTGCACAAAAAACTTTGCTCAATATGGCGACCTTAAGAGACACAAGATTCGTGTTCACACCGCTGAGAAGCCATACTTGTGCCAAGTGTGTTTACATAGGTTTAGCCAACATGGGGATCTTGTTCGACATACTCGACGTGTACATACTGGGGAGCGTCCATTTTCCTGTACTATATGTGTCAAAAGTTTTGTACAAAGAGCTGATCTTAATCGCCATGTTCGTCTTATTCATACTGGAGAGCGCCCCTTTGTGTGTGACCTTTGCCTGAAGGCATTTGTGCAACTGGGCGATCTAACAAGACACATAAGACGGGTACATGGTGGAGACAGCAGGCAGTATCACAGTTCACCCTGCATACTGAATCCAACTGCATCTGATCTCAGCAAACGCACCCAAACTGTTGACGTTGAACGACCATATGTGTGCGATATCTGTGGCAAAGCATTCTTGCAAGCTCGTCACCTGTCCCGTCATAACTTTACACACAGTGGTCAGCGTCCTTTCTCCTGCACCATATGCCTTAAGGGATTTGTTCAAGCCGGTGACCTGACAAGACACACACGTAGAATTCACACAAAGGAGAAACCTTTTAAGTGTCAGGTGTGTTTAAAGAGTTTTGTTCAAAGAACTGAACTAACAAGACATACAATACGTGAGCATACCAAAAAGAAACCAATCCCATGTAAAATCTGTCTAAAAACTTTTGTACAGGCCACAGATCTTGCACGCCATGTAAAGCGCATGCATACTGGTGGAGAAAAACCATTTTGTGACGTTTGCACACAGAATTATACAAAAGTAGGAGATGCTATGTCTGTGGAGGGCACCAAACCTCCTCAATCTCATGCAACCAGTGATACAGACAAGGACAGTGTTACAAGTGATGCACATGTCGTGATGGCCCAGGCTTACGTCACCATGGCTCAAAATATTACACCTTGTGTATGTATGCAGGAAAGAAAAGTTGGTGATGGTGATAAAACAGGCTGTGAACTTCAAAATGTCAACAAAACATTATAA
- Protein Sequence
- MEKTAELKLDNNSSPEIPQGNKFSSRWGDIWQEFLAPDNGSSPSNNCSATPVEPNSQTPKPVLDRPYRCDVCGKAFTQARHLTRHSMVHTGEKPYSCKQCLKKFSQQSDLTRHVRRIHTAEKPYICNICMKGFAQRGDFIRHTQRVHAENKPHVCSICTKNFAQYGDLKRHKIRVHTAEKPYLCQVCLHRFSQHGDLVRHTRRVHTGERPFSCTICVKSFVQRADLNRHVRLIHTGERPFVCDLCLKAFVQLGDLTRHIRRVHGGDSRQYHSSPCILNPTASDLSKRTQTVDVERPYVCDICGKAFLQARHLSRHNFTHSGQRPFSCTICLKGFVQAGDLTRHTRRIHTKEKPFKCQVCLKSFVQRTELTRHTIREHTKKKPIPCKICLKTFVQATDLARHVKRMHTGGEKPFCDVCTQNYTKVGDAMSVEGTKPPQSHATSDTDKDSVTSDAHVVMAQAYVTMAQNITPCVCMQERKVGDGDKTGCELQNVNKTL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00435006;
- 90% Identity
- iTF_00955783;
- 80% Identity
- iTF_00955783;