Mrel006048.1
Basic Information
- Insect
- Mantis religiosa
- Gene Symbol
- -
- Assembly
- GCA_030765055.1
- Location
- CM060947.1:272313301-272316123[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 16 5e-05 0.022 17.5 3.5 2 23 9 30 8 30 0.97 2 16 0.33 1.5e+02 5.4 3.5 1 23 65 87 65 87 0.96 3 16 1.8e-05 0.008 18.9 0.9 1 23 93 115 93 115 0.97 4 16 0.00071 0.31 13.9 3.0 1 23 187 209 187 209 0.98 5 16 0.0089 4 10.4 0.4 1 23 494 516 494 516 0.97 6 16 0.0098 4.4 10.3 3.2 1 21 521 541 521 547 0.95 7 16 3.9e-05 0.017 17.8 0.5 2 23 551 573 550 573 0.96 8 16 0.0042 1.9 11.4 1.0 1 23 580 602 580 602 0.95 9 16 0.0051 2.3 11.1 1.1 1 23 608 631 608 631 0.95 10 16 0.26 1.1e+02 5.8 3.6 3 23 636 656 635 656 0.96 11 16 1.1e-05 0.0048 19.6 1.2 1 23 663 685 663 685 0.97 12 16 0.0047 2.1 11.3 2.1 1 23 691 713 691 713 0.97 13 16 2.5e-05 0.011 18.4 0.8 1 23 719 741 719 741 0.97 14 16 3.6e-06 0.0016 21.1 3.9 1 23 747 769 747 769 0.99 15 16 8.5e-05 0.038 16.8 0.3 1 23 775 797 775 797 0.97 16 16 0.004 1.8 11.5 2.0 1 23 803 826 803 826 0.95
Sequence Information
- Coding Sequence
- ATGGAAGCACATCTTTCAAACTGGACATGTCACTTTTGTAATAAGAAGTTTACTGAGGAAGGTGACTTTACTTCACATATGAAGACTCATTTGGAACATACTTTCAATACTAAAGTATCAGAAGAGGAATTGCATATGGAAAGTGGAAGTGAAAATGAGTCTTGTGATtcatcacaaaatattttaactaattatgaatgtaatatttgtaattttcaatgtagtaataagaaaatatttgatGATCATGTGCGTAAGCATGTGGTTTTGAAACTTTTCCAATGTAAAGTATGTAAAAAGCGATTTGAATCTGAGGAGAAACTGAATGAACATATGGAAGAGCATTCACAAATGAATACAGaggaaaatgttcaagaaaaagaTAAAATGCTCAATGAGAACACTTCCAGAGAAGTCTTGACACAAGGTTCAAGTGAAAAtgttgaaacaaatgaacaaaatattaacacatcagtacaaaatgaaaatatggAATTTAATGTTGAAAACATTGTAGTAAAGAATGTTATGCAAAATCCAGAAAGGAATGAAATGTTTTACAATTGTcataaatgttcattgacttttgtaaatGAATCCGTCTTTAAGGAACATATGAAGCTGCACAAGGAAGAAGAAACAACTAAGGATCTGTTTTGTCAGGATGCAAGTTCATTGCTGCAGATGGAGAAGGTTAATTTAGATGAACATTCAGAACATGATGTCAACTCTCTTGATTCTGAATCTCAGCAGCAGCAACAGTATGTGGAAATGGATGAAAGTCTTGAAGACATGTTTGAAAACCTCCATGCTCATACAGAAAAGTCTGTTACAGCAGTAACTGGTTGTAGCGAGAAGAGTGTCATGGACGATATGTTTGAAAAAATTAAGGTTGGACTATCAAAATCAAGAGCAGACATGGAATTGACTGGTGACGGATCCACAACTATATCATTAAACTGTAATATACATAGTGATGAGTATGTTGCAGGTGAGGAACTGGACGTCCAAAAAGTTATGCATATGCATAGTGATACTCAAGAAGAAAATCCGTATGATCACTGTAGAATAGTAAATGACAATTTCTTTCATTTGACAGACATAAAAAAGAAAGGCCAGGATCCAGTTATAAGTTTACAGTCTGCAATCACTATTACAGATGGACAAATTCCAGTTGACACATTACTAAGTGAAGATTCCCGACAACAAGTAGAAAACCTCACAGATGCAACGCCTATCCAATCTGATGAGAATGTGAAGGACACTTTTCTGGATATCTTTAACATGGTCAAAGAGAAGAAACTTTCAGCAAGTGATGATGCTGAAATAGAACGTGCTTTGCTTGAAAATCTATCCAATGTTGAAGTTAAATTAGAACATGAGGATTCTTCATCAGCTTCTCTTAGTAATCTAAATCTGGACTCAAATGTGGAACCTGATGTTACAAACCAAGCTTCTTTTGGACTTAGTAAAAAgacttatgtttgtgctatatgtGGATTTCGAACAACAATATTGAACGAACTGAAAAGACATTTTAAAGAACACAAAGATAAATCATTTTCATGTAAAATCTGTAAAGCGGTTTTTCCAAATTCCCagaaactttcaagtcatttgAAATGCCATGAAAAGTTTAAAGGAAAAATGACATGCCCATACTGCTCTGAGGAATTTCCAGATACATTCAACTTACAGAAGCATCTGCAGATGAAGCATCAGAAAGATAAAGTAATGTATAAGTGTATTTTCTGTAGTGAATCATTCACTACTAAGAAGGCATTTAAAGCTCATGAAGAAGTTCATCCAGAAAGGTTCACATACAAATGTGATGAGTGTTCACAACAATTTATGAAGGAGAAGCAACTTACGGATCACAAAGATTCTGTGCACAGGGACCCACATTGCCGTTTCTGTGGCAAAGAAATAACAAAACTTAAAACTCTTAAAAATCATGAACTGCGGCATATCAGGgagaaagataattttgaatgtgATGTTTGCAAAcgtgtgttcaaaacaaaaacAGGTCTAAGGCATCATGTTGCTGTTCATACCGGTGAGTACAAATTTTGTTGTGACTATTGTGGGAGGGGTTTTATGTCACGAATGATGATGGAGGAGCATAGAAGCATGCACACTAAAGAGGAACGCTACATCTGTGATGTGTGTGGACGCAAATTTAGCTTCCAAAGTACATATTGGATACATCGAAAGTGGCATGATAATCCTTATCCTTACAAGTGTAGCTTTTGTGGTAGAATGTTTCGTCATTCATCACTTCTTGCTGTTCACAAGAGAAAACACACAGGTGAACGTCCATATAAATGTCCGCATTGCCCCCTCACATTTCCAGTTGGCGGTACTCTCAAAAGACATCTCATCCTTCATACAGGTGTGTACCCCTTCAACTGTGAAAGCTGTAAGCGTGGTTTCACAACGCGACATAAATATGCTGCTCATCTTGCCAAAATTCATGGAGACTTTGAACTGTTAAATAGCAAACAACCACAAAATGAGTACAAAATGGTAGTTCGTGAAGATCCCGTCCATCAGCAACCAGTGTGGCAGGTTGCTGACGATTCTATTACAGATCAACTAAGCTTCAAATTAGAAGCAATTGCTGGAGAAGATGAAACCAGTAAAGTCTTGGAAGAAGGTATAGCTTGTGCCATTGTTCCAGATGATATGTTGGTGGACAATGTAGTTCCTACTCGGGTAGTGAAAATTGTTTTAGACGAGGCATCTCAAGCAGTAGCTACAGTTACGTTAGCAGAACATCAGACCATTCAAAATATACTTCCAGATATTTGGTACCAATAA
- Protein Sequence
- MEAHLSNWTCHFCNKKFTEEGDFTSHMKTHLEHTFNTKVSEEELHMESGSENESCDSSQNILTNYECNICNFQCSNKKIFDDHVRKHVVLKLFQCKVCKKRFESEEKLNEHMEEHSQMNTEENVQEKDKMLNENTSREVLTQGSSENVETNEQNINTSVQNENMEFNVENIVVKNVMQNPERNEMFYNCHKCSLTFVNESVFKEHMKLHKEEETTKDLFCQDASSLLQMEKVNLDEHSEHDVNSLDSESQQQQQYVEMDESLEDMFENLHAHTEKSVTAVTGCSEKSVMDDMFEKIKVGLSKSRADMELTGDGSTTISLNCNIHSDEYVAGEELDVQKVMHMHSDTQEENPYDHCRIVNDNFFHLTDIKKKGQDPVISLQSAITITDGQIPVDTLLSEDSRQQVENLTDATPIQSDENVKDTFLDIFNMVKEKKLSASDDAEIERALLENLSNVEVKLEHEDSSSASLSNLNLDSNVEPDVTNQASFGLSKKTYVCAICGFRTTILNELKRHFKEHKDKSFSCKICKAVFPNSQKLSSHLKCHEKFKGKMTCPYCSEEFPDTFNLQKHLQMKHQKDKVMYKCIFCSESFTTKKAFKAHEEVHPERFTYKCDECSQQFMKEKQLTDHKDSVHRDPHCRFCGKEITKLKTLKNHELRHIREKDNFECDVCKRVFKTKTGLRHHVAVHTGEYKFCCDYCGRGFMSRMMMEEHRSMHTKEERYICDVCGRKFSFQSTYWIHRKWHDNPYPYKCSFCGRMFRHSSLLAVHKRKHTGERPYKCPHCPLTFPVGGTLKRHLILHTGVYPFNCESCKRGFTTRHKYAAHLAKIHGDFELLNSKQPQNEYKMVVREDPVHQQPVWQVADDSITDQLSFKLEAIAGEDETSKVLEEGIACAIVPDDMLVDNVVPTRVVKIVLDEASQAVATVTLAEHQTIQNILPDIWYQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00821183;
- 90% Identity
- -
- 80% Identity
- -