Basic Information

Insect: Hymenopus coronatus
Gene Symbol: -
Assembly: GCA_030762935.1
Location: CM060882.1:22975499-22978330[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 6.8e-05 0.029 17.5 3.5 2 23 9 30 8 30 0.97

2 16 0.21 90 6.5 3.3 1 23 66 88 66 88 0.96

3 16 5.9e-05 0.025 17.7 1.3 1 23 94 116 94 116 0.97

4 16 0.00037 0.16 15.2 1.3 1 23 188 210 188 210 0.98

5 16 0.0068 2.9 11.2 0.1 1 23 499 521 499 521 0.98

6 16 0.0024 1 12.6 1.1 1 21 526 546 526 548 0.95

7 16 3.9e-06 0.0017 21.4 0.3 2 23 556 578 555 578 0.96

8 16 8.7e-05 0.037 17.1 1.1 1 23 585 607 585 607 0.97

9 16 0.017 7.1 9.9 0.7 1 23 613 636 613 636 0.94

10 16 0.35 1.5e+02 5.8 3.5 3 23 641 661 640 661 0.96

11 16 1.5e-05 0.0063 19.6 1.2 1 23 668 690 668 690 0.97

12 16 0.0064 2.8 11.2 2.1 1 23 696 718 696 718 0.97

13 16 3.4e-05 0.014 18.4 0.8 1 23 724 746 724 746 0.97

14 16 4.9e-06 0.0021 21.1 3.9 1 23 752 774 752 774 0.99

15 16 0.00012 0.049 16.7 0.3 1 23 780 802 780 802 0.97

16 16 0.0054 2.3 11.5 2.0 1 23 808 831 808 831 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	6.8e-05	0.029	17.5	3.5	2	23	9	30	8	30	0.97
2	16	0.21	90	6.5	3.3	1	23	66	88	66	88	0.96
3	16	5.9e-05	0.025	17.7	1.3	1	23	94	116	94	116	0.97
4	16	0.00037	0.16	15.2	1.3	1	23	188	210	188	210	0.98
5	16	0.0068	2.9	11.2	0.1	1	23	499	521	499	521	0.98
6	16	0.0024	1	12.6	1.1	1	21	526	546	526	548	0.95
7	16	3.9e-06	0.0017	21.4	0.3	2	23	556	578	555	578	0.96
8	16	8.7e-05	0.037	17.1	1.1	1	23	585	607	585	607	0.97
9	16	0.017	7.1	9.9	0.7	1	23	613	636	613	636	0.94
10	16	0.35	1.5e+02	5.8	3.5	3	23	641	661	640	661	0.96
11	16	1.5e-05	0.0063	19.6	1.2	1	23	668	690	668	690	0.97
12	16	0.0064	2.8	11.2	2.1	1	23	696	718	696	718	0.97
13	16	3.4e-05	0.014	18.4	0.8	1	23	724	746	724	746	0.97
14	16	4.9e-06	0.0021	21.1	3.9	1	23	752	774	752	774	0.99
15	16	0.00012	0.049	16.7	0.3	1	23	780	802	780	802	0.97
16	16	0.0054	2.3	11.5	2.0	1	23	808	831	808	831	0.95

Sequence Information

Coding Sequence: ATGGAAGCACATCTTTCAAACTGGACATGTcacttttgtaataaaaagtttACTGAGGAAGCTGACTTTACGTCACATATGAAGACTCATTTGGGACATGCAGCCAATCCTCCTAAAGTGTCAGAAGATGAATCACATGTAGAAAGTGGAAGTGACAATGAATCTTGTGATTCGTCACAAAATATTTTAGGTAATTATGAATGTAATATTTGCAATTATCAATGTAGTAGTAAGAAAATATTTGATGATCATGTGCGCAAACATGTGGTTTTGAAACTTTTCcaatgcaaaatatgtaaaaaacggtTTGAATCAGAGGAGAAAGTGAATAAGCATATGGAGGAACACTCTTCAGAAATGAATGAGACAGATATTGAAAACTATAGTGCATCCAAGGAGAACCCTTCCAGAGAAATCTCTATACAAGATTCAGGCGAAGCTATTGAAACAAATGAGCAAAACAGTAACACATCGATGCAAAATGAAGATGTAggaataaatgttgaaaataaaacaataaagagtgctatacaaaattcaggaaaGAATGAAATAATGTTTTACACCTGTCAGAAATGTTCATTGACTTTTGTAAATGAATCCCTTTTTAAGGAACATGTGAAACTACATAAGGAAGAAGAAGCAACTAAGGATCTGTTTTGTCAGGATGCTAGTACATTACTGCAGATGGAGAAAGTTAATCTAGATGAAGATTCAACAGAACATGATGTCAACTCCCTTGATTCAGAAGCTCAGCGGCAGTATGTAGAAATGGATGAAAGTCTTGAAGACATGTTTGAAAAACTCCATGCTGATACAGAAAAGTCAGTTACAGAAACTGGTTGTAACGAGAAGAGTGTCATGGAGgatatgtttgaaaaaatgaaGGATGGACTGGAAAAATCAAGAGCAGACATGGAGTGCAGTATGAATACTGAAGAATCCACAAATGCATCATCGTTAAATTGCAATATCCATAGTGAGGAATTTGTTGCAGGTGAAGAGTTGGACAAGGTTACACATACAGATACTGATACTCCAGAAGAAAACCCTTATGATCATTGTAGAATTGTAAATGACAAAAATTTCTTTAATTTGGCAGACATAAAAAAGAAGGGTAGTGCTGCAAACCAGGATCCAGTTATAACTTTACAATCTGCAATCACAATTACAGATGGGCAGATTCCTGTTGACACGTTACTAAGTGAAGACTCCCGGCAGCAAGTGGAAAACCTCACAGATGCAACACCCATTCAGTCTGATGAGAATGTGAAGGACACCTTTCTAGATATCTTTAACATGGTAAAAGAGAAGAAACTTTCAGCAAATGATGATGCTGAAATAGATCATGCTTTGCTCGAACATCTGTCCAATGCTAAAATTAAGTTAGAACATGAGGATTCTTCATCAGCTTCTCTTGGTGTGCTAAATCTGGGTTCCAATGTGGAACCTGATGTTACAAACCAAGCTTGTTTTGGTCTTAATAAAAAGACGTATGTTTGTGCAATATGTGGGTTTCGAACACCAATACTGAATGaattaaaaaggcattttagagtcCATAAAGATAAATCATTTAcatgtaaaatctgtaaaacaGTTTTTCCAACTTCTCTGAAACTTTCAAGTCATTTGAAGTGTCAtgaaaagtttaaaaacaaaatgacatGCCCATACTGCCCTGAGGAATTTCCAGATAAATTCAACTTGCAGAAGCATCTGCAAATGAAACATCAGAAAGATAAAGTGatgtataagtgtgtgttttGTAATGAATCATTCACCACTAAGAAAGCATTTAAAGCTCATGAAGAAGTTCATCCAGAAAGGTTTAGATACAAATGTGATGAGTGTTCGCAACAGTTTATGAAGGAGAAGCAACTTGTGGATCACAAAGATTCTGTGCACAGGGATCCACATTGCCGTTTCTGTGGCAAAGAAATAACAAAACTAAAGACTCTTAGAAACCATGAACTGCGACACATCAGGGAGAAGGATAATTTTGAATGTGATGTTTGTAAACGTGTGTTCAAAACAAAAACTGGTCTAAGGCATCATGTGGCTGTTCATACTGGTGAGTACAAGTTTTGTTGTGATTATTGTGGGAGGGGTTTTATGTCACGTATGATGATGGAGGAGCACAGAAGCATGCACACCAAAGAAGAACGCTATATCTGTGATGTCTGTGGACGCAAATTTAGCTTCCAAAGTACATATTGGATACATCGCAAGTGGCATGACAATCCTTATCCTTACAAGTGCAGCTTCTGTGGGAGAATGTTTCGTCATTCATCCCTACTTGCTGTCCACAAGAGAAAACACACGGGCGAACGTCCATATAAGTGTCCACATTGCCCACTTACTTTTCCAGTTGGTGGTACTCTCAAAAGACATCTGATCCTCCACACAGGTGTGTATCCCTTCAACTGTGAAAGCTGTAAGCGTGGTTTCACAACAAGACATAAATATGCTGCTCATCTGGCAAAAATTCATGGGGACTTTGAACTGCTAAACAACAAACAACCACCAAATGAGTACAAAATGGTAGTTCGAGAAGAACCCGTCTATCAGCAGGCAGTTTGGCATGTTGCTGATGATTCTATTCCAGAACAACTAAACTTTAAGCTAGAAGCAATTGCAGGAGAAGATGATGCAAGTAAAGTCTTGGAAGAAGGTATAACCTGTGCCATTGTTCCAGATGATATGTTAACAGATGATGTTCCTACACGGGtagtgaaaattattttagacGAGGCATCCCAAGCAGTAGCTACAGTGACGCTAGCAGATCAGACCATTCAGAGTATACTTCCAGATATTTGGTACCAATAA
Protein Sequence: MEAHLSNWTCHFCNKKFTEEADFTSHMKTHLGHAANPPKVSEDESHVESGSDNESCDSSQNILGNYECNICNYQCSSKKIFDDHVRKHVVLKLFQCKICKKRFESEEKVNKHMEEHSSEMNETDIENYSASKENPSREISIQDSGEAIETNEQNSNTSMQNEDVGINVENKTIKSAIQNSGKNEIMFYTCQKCSLTFVNESLFKEHVKLHKEEEATKDLFCQDASTLLQMEKVNLDEDSTEHDVNSLDSEAQRQYVEMDESLEDMFEKLHADTEKSVTETGCNEKSVMEDMFEKMKDGLEKSRADMECSMNTEESTNASSLNCNIHSEEFVAGEELDKVTHTDTDTPEENPYDHCRIVNDKNFFNLADIKKKGSAANQDPVITLQSAITITDGQIPVDTLLSEDSRQQVENLTDATPIQSDENVKDTFLDIFNMVKEKKLSANDDAEIDHALLEHLSNAKIKLEHEDSSSASLGVLNLGSNVEPDVTNQACFGLNKKTYVCAICGFRTPILNELKRHFRVHKDKSFTCKICKTVFPTSLKLSSHLKCHEKFKNKMTCPYCPEEFPDKFNLQKHLQMKHQKDKVMYKCVFCNESFTTKKAFKAHEEVHPERFRYKCDECSQQFMKEKQLVDHKDSVHRDPHCRFCGKEITKLKTLRNHELRHIREKDNFECDVCKRVFKTKTGLRHHVAVHTGEYKFCCDYCGRGFMSRMMMEEHRSMHTKEERYICDVCGRKFSFQSTYWIHRKWHDNPYPYKCSFCGRMFRHSSLLAVHKRKHTGERPYKCPHCPLTFPVGGTLKRHLILHTGVYPFNCESCKRGFTTRHKYAAHLAKIHGDFELLNNKQPPNEYKMVVREEPVYQQAVWHVADDSIPEQLNFKLEAIAGEDDASKVLEEGITCAIVPDDMLTDDVPTRVVKIILDEASQAVATVTLADQTIQSILPDIWYQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00955795;
90% Identity: -
80% Identity: -