Mrel002458.1
Basic Information
- Insect
- Mantis religiosa
- Gene Symbol
- -
- Assembly
- GCA_030765055.1
- Location
- CM060947.1:110344255-110345904[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 0.00032 0.14 14.9 0.1 3 23 129 149 127 149 0.96 2 14 3.3e-05 0.015 18.0 1.3 1 23 154 176 154 176 0.95 3 14 0.00024 0.11 15.3 5.0 1 23 186 208 186 209 0.94 4 14 0.0015 0.68 12.8 3.9 1 23 215 238 215 238 0.94 5 14 4.1e-06 0.0018 20.9 1.3 1 23 244 266 244 266 0.97 6 14 1.8e-05 0.008 18.9 4.0 1 23 272 294 272 294 0.97 7 14 1.2e-05 0.0052 19.5 0.1 1 23 300 322 300 322 0.98 8 14 2e-06 0.00089 21.9 1.9 1 23 328 350 328 350 0.98 9 14 8.7e-08 3.9e-05 26.2 4.4 1 23 356 378 356 378 0.98 10 14 0.00079 0.35 13.7 4.1 1 23 384 406 384 406 0.98 11 14 5.4e-07 0.00024 23.7 0.6 1 23 414 436 414 436 0.97 12 14 0.00074 0.33 13.8 2.7 1 23 442 464 442 464 0.98 13 14 0.00011 0.05 16.4 6.2 1 23 470 492 470 492 0.97 14 14 7.6e-05 0.034 16.9 5.3 1 23 498 520 498 521 0.96
Sequence Information
- Coding Sequence
- ATGGAGGAGGTCACAGCAGGATTGATAAACCATGCTGTAGCAGCAGCTGCTGCTGCATACCAGAAACCACCAATCACTCAAGATTTATCTGCAGCAGTGCACATACCCAGTATCCCTAATCACTTCATAACAAGAAGTGATCAACACCCTCCTCCGCCACCTCCTCCTCCACATTATACCAGCGAGACTATACCAACAGTTACACAGAGAACTGTGGGCACTAGTACAGCTGACTTTGTAAGGGAACTTCAGTATGGAGAGATGACCGAGGCCATTGGAATGGTGCTAGGATTTGATGACCTCCCCCCACatccaaaattaacaaaaattaaaaatggtggtAAAAGAAGTCCACAGTCTGCCAACAAACAGCATGTCATTGATTGTGCCATTTGCAAGGAATCATTCAGCAGAAAATTAGAACTGGATAttcatctgatgtctcacacggAGGAATTGTACAAATGCCCAATGTGCCAAAAATCTTTTCCTGATGTACATTCTATGCAAAGGCATGTGGCATTCCATTGTGCTGCTGGTGGTGCGGGCAGTCTTCACCAGTGTCCTGTATGCATGAAATGCTTCACACGAAAAGGATTACTCAATCGGCATGCTGCCCAACATCATGCTTCTGAAAGACCACATATCTGTGCCATTTGCAAGAAGGCATTTCGTAAAAAGGGTGACCTCAGTGTTCATTTCAAAAACTGTCATGCTGGGGGTGCACGTCATGAATGTCCTACATGTGGTAAGACATTCTCCCGACGTGATACTATGCTACTGCATGCACGTTTACACACTAACGACCGCCTCTTTCAGTGTCCTGTGTGTTTGAAGTGCTTTCCTCAGAGATTTCATCTCAATCGACATGTAACAGTGCATTCTCAAGAGCGACCCTATCCTTGCTATGTCTGTCCTAAGTCATTTAAAAGTGTAGCCGAATTGAACATTCATACAGAGACTCATTATGGTGACAAGCGGCACAAATGTGAAGTATGCGACAAAATGTTTTCTCGGGGAGACTCTCTCAGATTACATCAGCGTCTACATACTGGTGAGCATCTCTATAAGTGTCCGGTTTGTGGTAAATGCTTCACACAGAAATTTCACTTAAATCGCCATGCTTTGGTACATACAGATGAGAAACCACATAGATGTCCAGTCTGTACTAAAGCTTTTAAGTGCAGACGCAATCTTGAAATTCATGCTAAAACTCATGAAGCAGGGAACAGAAAGCGTCATGAATGCCCAATGTGCTCCAAAGCATTTGCAAGACGTGACACACTGCTAGTGCATATGCGATTACATACTCGAGATCGCCTTCATAAATGTGacacatgttttaaactctttccATTAGCAAGTCACCTAGCACGCCATGTTAAGATACATACAGGTATTCAGCGGCATCACTGCCCAACATGCAATAAAGGATTCCGAAGCAAATATTATCTTTCTCAGCATACACGTTTACACACAGATGGCACACCCTTTGAATGCTCAGTTTGCAAGAAGACTTTCAGTATGAAGCAGCATCTGCAAGGTCATGAGAGATCACACCATAAAGAACTAAGAGGTGTGCCAcgtccaccaccaccacccccagtAATTGTGCCTCCTCAACCGAACACTATACTACACCCCGGCTAG
- Protein Sequence
- MEEVTAGLINHAVAAAAAAYQKPPITQDLSAAVHIPSIPNHFITRSDQHPPPPPPPPHYTSETIPTVTQRTVGTSTADFVRELQYGEMTEAIGMVLGFDDLPPHPKLTKIKNGGKRSPQSANKQHVIDCAICKESFSRKLELDIHLMSHTEELYKCPMCQKSFPDVHSMQRHVAFHCAAGGAGSLHQCPVCMKCFTRKGLLNRHAAQHHASERPHICAICKKAFRKKGDLSVHFKNCHAGGARHECPTCGKTFSRRDTMLLHARLHTNDRLFQCPVCLKCFPQRFHLNRHVTVHSQERPYPCYVCPKSFKSVAELNIHTETHYGDKRHKCEVCDKMFSRGDSLRLHQRLHTGEHLYKCPVCGKCFTQKFHLNRHALVHTDEKPHRCPVCTKAFKCRRNLEIHAKTHEAGNRKRHECPMCSKAFARRDTLLVHMRLHTRDRLHKCDTCFKLFPLASHLARHVKIHTGIQRHHCPTCNKGFRSKYYLSQHTRLHTDGTPFECSVCKKTFSMKQHLQGHERSHHKELRGVPRPPPPPPVIVPPQPNTILHPG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00995531;
- 90% Identity
- iTF_00995531; iTF_00821166; iTF_00434994; iTF_01410922;
- 80% Identity
- -