Basic Information

Insect: Hymenopus coronatus
Gene Symbol: -
Assembly: GCA_030762935.1
Location: CM060882.1:184128524-184130113[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.00042 0.18 15.0 0.1 3 23 112 132 110 132 0.96

2 14 4.3e-05 0.018 18.1 1.3 1 23 137 159 137 159 0.95

3 14 0.00031 0.13 15.4 5.0 1 23 169 191 169 192 0.94

4 14 0.002 0.85 12.9 3.9 1 23 198 221 198 221 0.94

5 14 5.3e-06 0.0023 21.0 1.3 1 23 227 249 227 249 0.97

6 14 2.3e-05 0.0099 18.9 4.0 1 23 255 277 255 277 0.97

7 14 1.5e-05 0.0065 19.5 0.1 1 23 283 305 283 305 0.98

8 14 9e-06 0.0038 20.2 1.9 1 23 311 333 311 333 0.98

9 14 1.1e-07 4.8e-05 26.2 4.4 1 23 339 361 339 361 0.98

10 14 0.00054 0.23 14.6 4.0 1 23 367 389 367 389 0.98

11 14 7e-07 0.0003 23.7 0.6 1 23 397 419 397 419 0.97

12 14 0.0016 0.7 13.1 2.5 1 23 425 447 425 447 0.98

13 14 0.00015 0.063 16.4 6.2 1 23 453 475 453 475 0.97

14 14 5.6e-05 0.024 17.7 5.4 1 23 481 503 481 504 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.00042	0.18	15.0	0.1	3	23	112	132	110	132	0.96
2	14	4.3e-05	0.018	18.1	1.3	1	23	137	159	137	159	0.95
3	14	0.00031	0.13	15.4	5.0	1	23	169	191	169	192	0.94
4	14	0.002	0.85	12.9	3.9	1	23	198	221	198	221	0.94
5	14	5.3e-06	0.0023	21.0	1.3	1	23	227	249	227	249	0.97
6	14	2.3e-05	0.0099	18.9	4.0	1	23	255	277	255	277	0.97
7	14	1.5e-05	0.0065	19.5	0.1	1	23	283	305	283	305	0.98
8	14	9e-06	0.0038	20.2	1.9	1	23	311	333	311	333	0.98
9	14	1.1e-07	4.8e-05	26.2	4.4	1	23	339	361	339	361	0.98
10	14	0.00054	0.23	14.6	4.0	1	23	367	389	367	389	0.98
11	14	7e-07	0.0003	23.7	0.6	1	23	397	419	397	419	0.97
12	14	0.0016	0.7	13.1	2.5	1	23	425	447	425	447	0.98
13	14	0.00015	0.063	16.4	6.2	1	23	453	475	453	475	0.97
14	14	5.6e-05	0.024	17.7	5.4	1	23	481	503	481	504	0.96

Sequence Information

Coding Sequence: ATGGAGGAGGCAACAGCAGGACTGATGAACCATGCTGCTGCATACCAGAAACCACCAACCACTCAAGACTTAACAGCAGCTGTGCACATACCCAACCACTTCATAGCAAGAAGTGAGCAACCTCCCCAGTATGCCGGCGAGACTTTACCCACTCAGAGAACTGTGGGCACCAGCACAGCTGACTTTGTCAGAGAGCTGCAGTATGGAGAGATGACTGAAGCCATTGGAATGGTGCTGGGATTTGAAGACCTCTCCCCACATCccaaattaacaaaaattaaaaatggtgGTAAAAGAAGCCCGCAGACCCCCAACAAGCAACATGTCATTGATTGTGCCATCTGCAAGGAATCATTCAGCAGAAAGTTAGAGCTGGACATCCATTTGATGTCCCACACTGAGGAATTATACAAATGCCCAATGTGCCAAAAGTCTTTTCCTGATGTACATTCCATGCAACGCCACGTGGCATTCCACTGTGCAGCTGGGGGGGCGGGTAGTCTTCATCAGTGTCCGGTGTGCATGAAATGTTTCACACGCAAGGGGCTACTCAACCGCCATGCTGCACAACATCATGCTTCTGAAAGACCGCACATCTGTGCCATTTGCAAGAAGGCATTTCGTAAAAAAGGTGACCTCAGTGTTCATTTTAAAAACTGCCATGCTGGGGGTGCACGCCATGAATGTCCTACGTGTGGCAAGACATTCTCTCGGCGTGATACCATGCTGTTGCATGCACGCTTACACACTAATGACCGTCTCTTCCAGTGTCCTGTGTGTTTGAAGTGCTTTCCTCAGAGGTTCCATCTCAACCGACATGTAACAGTTCATTCTCAAGAGCGACCCTATCCTTGTTATGTTTGCCCCAAGTCATTTAAAAGTGTAGCCGAACTGAACATCCACACAGAGACACATTACGGTGATAAACGACACAAATGTGAAGTATGTGAGAAGATGTTTTCTCGGGGAGACTCTCTCAGGTTACATCAGCGTCTTCATACTGGGGAACACCTCTACAAGTGCCCTGTTTGTGGCAAATGCTTCACACAGAAGTTTCACTTAAACCGCCATGCTTTGGTTCACACAGATGAGAAGCCACATCGATGTCCAATTTGTTCTAAGGCCTTCAAGTGCAGGCGCAACCTGGAAATTCATGCCAAAACTCACGAGGCAGGGAACAGAAAGCGTCATGAGTGTCCCATGTGCTCCAAAGCATTTGCAAGACGCGATACGCTGCTGGTGCATATGCGATTGCACACTCGAGATCGTCTTCATAAATGTGACACATGTTTCAAGCTGTTTCCGTTAGCAAGTCATCTAGCACGCCATGCTAAGATACATACCGGCATTCAGCGCCATCACTGTCCAACATGCAATAAAGGATTCCGAAGCAAGTACTATCTTTCTCAGCACACCCGTCTGCACACAGACGGCACACCTTTTGAGTGTTCCATTTGCAAGAAGACTTTCAGCATGAAACAGCATCTGCAAGGTCACGAGAGGTCACACCACAAAGAGCTGAGAGTTGTGCCAGGTCCAGCGCCAGTGATGGTGCCCCCCCAACCAAACACGATACTACACCCTGGCTAG
Protein Sequence: MEEATAGLMNHAAAYQKPPTTQDLTAAVHIPNHFIARSEQPPQYAGETLPTQRTVGTSTADFVRELQYGEMTEAIGMVLGFEDLSPHPKLTKIKNGGKRSPQTPNKQHVIDCAICKESFSRKLELDIHLMSHTEELYKCPMCQKSFPDVHSMQRHVAFHCAAGGAGSLHQCPVCMKCFTRKGLLNRHAAQHHASERPHICAICKKAFRKKGDLSVHFKNCHAGGARHECPTCGKTFSRRDTMLLHARLHTNDRLFQCPVCLKCFPQRFHLNRHVTVHSQERPYPCYVCPKSFKSVAELNIHTETHYGDKRHKCEVCEKMFSRGDSLRLHQRLHTGEHLYKCPVCGKCFTQKFHLNRHALVHTDEKPHRCPICSKAFKCRRNLEIHAKTHEAGNRKRHECPMCSKAFARRDTLLVHMRLHTRDRLHKCDTCFKLFPLASHLARHAKIHTGIQRHHCPTCNKGFRSKYYLSQHTRLHTDGTPFECSICKKTFSMKQHLQGHERSHHKELRVVPGPAPVMVPPQPNTILHPG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00995531;
90% Identity: iTF_00955778;
80% Identity: -