Basic Information

Gene Symbol
lilli
Assembly
GCA_030765055.1
Location
CM060948.1:345280330-345369123[-]

Transcription Factor Domain

TF Family
AF-4
Domain
AF-4 domain
PFAM
PF05110
TF Group
Unclassified Structure
Description
This family consists of AF4 (Proto-oncogene AF4) and FMR2 (Fragile X syndrome) nuclear proteins. These proteins have been linked to human diseases such as acute lymphoblastic leukaemia and mental disabilities [1]. The family also contains a Drosophila AF4 protein homologue Lilliputian which contains an AT-hook domain. Lilliputian represents a novel pair-rule gene that acts in cytoskeleton regulation, segmentation and morphogenesis in Drosophila [2].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 5 2.5e-11 1.2e-06 30.5 16.9 363 503 7 172 4 200 0.74
2 5 0.19 9.2e+03 -2.1 0.6 455 491 233 265 205 277 0.45
3 5 1.8 8.6e+04 -5.3 14.4 77 250 274 439 254 455 0.47
4 5 2 9.5e+04 -18.4 30.5 94 212 475 601 450 690 0.43
5 5 0.00029 14 7.2 13.5 104 220 841 955 813 1015 0.58

Sequence Information

Coding Sequence
ATGACAGAAGTGATGGCACCAATATCTGGAATTGCCACACCAAGGAAAGAACTGGAATCTAAGTTCACCTTCAGTCCCATTGTTCCCAAGAGCACCACCTCCGAAGTGCAGCCTTCGCGAGTCGCTACCGATTACAACCGGAATAACAACAGGCATGGAAATCAGGTGCTGCCAACGACGGGCAATTTGGAAAAGGACCTGAGTCTGTCGGACAGTAGTGATGATGACAAGGATGTGCTTAAGTCGAGTGGAAAACCCTCCTCTGCTGCTGCAGTTAAAATGGACCAATCCAGGCGAGTTCCAGCGCTGCTGACTACCAGTCCTACTCCAAGCATCCTTAGTGTGGGAAGTAGACCACCAGAGCCAGCACCGCTAATGTCCCCAGTTGGACCTGCTTCATCTTCCAGTGAAGCAGATTCTGACTCTGGCTCTGGGTCAGACAGTGAGTCAAGCAGTGAGGACTCTGGGGATGAAGCTCCACGCGAGTCAGCTGAACCAGCAGCAATGcctacaacagcagcagcagcatcgcCACACCAGATGGAGCAGTTAGAAGAGGCAAAGCCCCAGGATCGCTGGAACCTGGGAAGGTTTCTCAAACCCATTGGAGAACCTCCAGAAGAGAATGAACAAACTAGAACTGGTCCAGAATTTGCTAAGCAAGACGAGTCCCCAGCTGCTGCAGTAGTCGCTACAGCAGCAGTAGCCACATCAGTTCCTGCAATTAGTACTTCGTCCAAGGAGAAGCAGGAAGAAGGCGAGATTGTTTCTGATGACAGCGACTCCAACAAGGAGTTGGACAATGTTGTGGAGGACTTGCAGCATCCAGTACCACTTCTGTCAGGCATCTCAGATGAGTCTGATTCTCCACCTGTTATGGAAACTAGGACTGCCCCCATCACAAAAAGGAAACGTCCGTCAATCAACACTAGGCCCCCTGTGCTATCAGAGAGTGACAGTGATGGTGAAGTGAAAGTGAGGGAAAAACCAAGGACACATAAGAGGACTCAGCCCCGTACTAAGAAACAAACACGCTCTCCTAGTTCATCAGATGATGAACCTGAGGACCCTGCCAGAACAATAAAGCTGCGAAATGGTGGCACAACCCGATCTCTAGATGGTGACAATCACCGAAAAAAGTCAAGGAATCGtaaaccactaccaccaccaccaccaccaccgccaccaccaccaccaccaccagctgCATCATCGAGTGAGTCAGAACCTGAGGATATGAAGAAAAAAGTAACCAAAGTCGTATTATCATCTTCTAGTTGTTCAGAAGGTGAGATTAAGGAGCCAAAGCCAAAAGAAAAGACAGTTGTTAATGTTCCATGTGCATCAGGAGAAGAGTCTGAACCAGTCAAGAAAAATGTCAGTGAGTCAGAGGAAGAGGTGAAGTCAAAAATTCATAGTGCAAGCAGCAGAGAAAGTTCTAAAGTGAGGACAAAGGTTCATGTAAGTGACTCAGACGAGGAACTGAGTATAAAACCGTCAGTTGTGATAGAAGTGAGTGACTCTGACGAACCAAACTGGGACAAGAGTAAGACCAAAGTACAAAGTGCAAAGAAAGGTAGAGCTAGGAGTAAGCCAAGATCAAGTGAGAGGTCAGCCAAGCGAGAGGAAAAGAAATCCAGCGGTCCAAAGAAAGAAAGGACACCCAAACGTCCGAACAATAGAAAGAGACCTAGAGATGACACTTCACTGGGCCCAAAGAAATCTTCAGGACCTGGAAGGCCAATGCGAAAGAGTGgcatttttaaaagcatggaAACATGCCCTCCAGATACTCCTTCGAACAGTGATGGTGAAATGGACATTGTAAGTACTTCCCCAGTAAAGCCAGTCACAAGACCTAAACTGCTGAACAACAACTGTCGAGATTCTAGCTCTGACTCGGATGGGGCTCACACTAGGATAAAACCAGATGTGATTCCAAAACGCAAACATTCATCAGATAGTGAACGGGACAGCGATGGGTCTCCTGTGAGTCGTCCACAGGCCTCTAAAGTAGAGAGTCCTCCCAAACTGGATAGTGAGgacaaaaccatccaggacaagAAGAAAAGTGATACATTACGGAAATTGTTCACATTGAAGGGTGGGGCTAAAGGAGGTGGTAAAGGAGGAGCCAAGGGGGGTGGCAAAGGTAAGGGGGGCTCTAAGACACCAGGGGTGCTAGTGATAGAGTGTGGCGAGTGTGAAGACGAGCACTTGCCCACCCCAGTCAGTCCTGAGCTTTTGTCACCACTGCCAAGTAGCGAGGGTGGTAGCACTGCAACCAAAAGAAAACCTAGTAAGAAGGATTCAGCAGTGGAACTTCCTCCATTAGTTTATAGTGACAGTGGTATTCCAATTTTGTTGTGTCAGGTGGATCTCTCAAGACTGTTGCATATACCTGCAGGCAAAGGTCAAGACGTAAGAGTACGCACTGAACTGCCTGACACCAGGCAACCCACTGACATTGAGGATACAGTTATACCAAAGTGTACAGGTTGTGACAACACAGATGAAAAGGCTTCCAAGAAGCACAAGAAGAAGAAGCAAGGCTCCAAGGATACTGAGGGTGAGAAGTCAGGAGATAAACATCATCATAAGCGAGAACGCCGAACCAGCAACAGTTCAGTTTCATCGTTATCAACAGAATGTAGTCGTGTTTCATCACAAGGTGCTAGAACCCACAAACGCCACAGGCACAGTCACAGTCACGAACACAGTTCCAGCAAACGACGGAaaggtggtagtggtggtagacAACCGCCACCAGTAGAAGAGGATCTGCCAGAACCAAAATTATCTAGTCAAAGTACCAACACAACAGCACTAAGCGATGTGCCTCCAACAAATCATGAACGAGAGGAGGGTAATGAAGATGTGAATATTGCTCCAGCTGCTGATGCACTAGTGCCATGTGCTGGCTGGGCACCTCAGCCCCAGAAGGTTTACTATTCTTACTTTGAACGAGAGGAAGAGGATACCTCTGATCATGAGGAGAGAGATGAGAATCAGCAGAACAACTATCTGAAGGAAGCAAAGAGGCTGAAGCATGGGGCAGATAAAGAGATGGACCATTTggcacagggaatgcagtacttaGAGGCAGTGTTGTTCTTCATTCTCACTGGCAACGCAATGGAACGCGAAAGAGTGACTGAGAAAGCAGCATTCACCATGTATAAGGATACACTTAGCCTCATCAAGTTCATTTCCTCTAAATTTCGAACACTCCAAAATCATTCTCCAGTCAGCATAGACAAAATTGCTATTTTGAGTTTGAGATGTCAGTCATTGCTGTATCTGAAGCTGTTTAAAATGAGGCGTCACGAAGTTAAGGAATATCAGAAAGTATTGCAGGATTATCATCAAAAGGCCACTCAGCCGACACCTTTGCAGCCGGAGCAGTGTGGGGGCCAAGGGACACCTTCTCCACTATCACCAACCCCTTCTCCTGCTGGCTCTGTAGGTTCCGTTGGCAGTCAGTCCTCCGGATATAGTAGTGGTGAACTGGCGGCAGGAAGAACTGGTGTGGGAGTAGGTAATGCTGTGGTACAGCAGCCCCCAGCAGCCAACATGGGACCTTGTGTAGCAGTTCCATTGGCAGTGCACTCTGCAATGCAAAAACAGAACCAACACTTCAGTTATTTGCTGTCATGTCATGAGTTGTGGGAACAAGCTGATGACTTGGTGTACAAAGGGAAACACACAGGTATATTACTACCCTTATGCATTTGCTAA
Protein Sequence
MTEVMAPISGIATPRKELESKFTFSPIVPKSTTSEVQPSRVATDYNRNNNRHGNQVLPTTGNLEKDLSLSDSSDDDKDVLKSSGKPSSAAAVKMDQSRRVPALLTTSPTPSILSVGSRPPEPAPLMSPVGPASSSSEADSDSGSGSDSESSSEDSGDEAPRESAEPAAMPTTAAAASPHQMEQLEEAKPQDRWNLGRFLKPIGEPPEENEQTRTGPEFAKQDESPAAAVVATAAVATSVPAISTSSKEKQEEGEIVSDDSDSNKELDNVVEDLQHPVPLLSGISDESDSPPVMETRTAPITKRKRPSINTRPPVLSESDSDGEVKVREKPRTHKRTQPRTKKQTRSPSSSDDEPEDPARTIKLRNGGTTRSLDGDNHRKKSRNRKPLPPPPPPPPPPPPPPAASSSESEPEDMKKKVTKVVLSSSSCSEGEIKEPKPKEKTVVNVPCASGEESEPVKKNVSESEEEVKSKIHSASSRESSKVRTKVHVSDSDEELSIKPSVVIEVSDSDEPNWDKSKTKVQSAKKGRARSKPRSSERSAKREEKKSSGPKKERTPKRPNNRKRPRDDTSLGPKKSSGPGRPMRKSGIFKSMETCPPDTPSNSDGEMDIVSTSPVKPVTRPKLLNNNCRDSSSDSDGAHTRIKPDVIPKRKHSSDSERDSDGSPVSRPQASKVESPPKLDSEDKTIQDKKKSDTLRKLFTLKGGAKGGGKGGAKGGGKGKGGSKTPGVLVIECGECEDEHLPTPVSPELLSPLPSSEGGSTATKRKPSKKDSAVELPPLVYSDSGIPILLCQVDLSRLLHIPAGKGQDVRVRTELPDTRQPTDIEDTVIPKCTGCDNTDEKASKKHKKKKQGSKDTEGEKSGDKHHHKRERRTSNSSVSSLSTECSRVSSQGARTHKRHRHSHSHEHSSSKRRKGGSGGRQPPPVEEDLPEPKLSSQSTNTTALSDVPPTNHEREEGNEDVNIAPAADALVPCAGWAPQPQKVYYSYFEREEEDTSDHEERDENQQNNYLKEAKRLKHGADKEMDHLAQGMQYLEAVLFFILTGNAMERERVTEKAAFTMYKDTLSLIKFISSKFRTLQNHSPVSIDKIAILSLRCQSLLYLKLFKMRRHEVKEYQKVLQDYHQKATQPTPLQPEQCGGQGTPSPLSPTPSPAGSVGSVGSQSSGYSSGELAAGRTGVGVGNAVVQQPPAANMGPCVAVPLAVHSAMQKQNQHFSYLLSCHELWEQADDLVYKGKHTGILLPLCIC

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01410792;
90% Identity
-
80% Identity
-