Mrel063290.1
Basic Information
- Insect
- Mantis religiosa
- Gene Symbol
- -
- Assembly
- GCA_030765055.1
- Location
- CM060957.1:90736854-90752290[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.11 1e+02 5.1 0.0 27 35 18 27 4 30 0.79 2 3 1 9.4e+02 2.0 0.0 6 22 29 52 28 62 0.83 3 3 1.8e-06 0.0017 20.4 0.0 2 40 72 110 71 114 0.91
Sequence Information
- Coding Sequence
- ATGGATCGAGTCCTAGCTGGAGCCTCTGTCATGAGCGTAGCCAGGGATTGCAACATACCTCGCTCTACTCTACACCTGAATGCAGCTGAAGCATTGCAGAATGTGCTTTGTGTTTTATCACCAAGTGGTGAAGGGGAGACAACTATTACAAAAGCAGTGACCTTAACAGGAAGTCCTATGTCTACTCCACCAACAACAAGAATTCGGCGTTCAGAACAAGAATTGCAGAAGGCTGCAGAATGTGTACAAAAAGGCATGACTTTCCAGAATGTTTCAGACATCTTCAAAATACCTATATCGACAATCCGTTTCTACATGGCACGACGTGGCATTCTGCCCCAGCGCCGTAGAGGCCGTGCTGCACTGAATCAGAGTGCAGGCGTACCTTCACCACACTACCTCACCATGCAGTTCAAGTTACCTGACATGGGTAACCCACCAAAACTTCCTTCTCCATGA
- Protein Sequence
- MDRVLAGASVMSVARDCNIPRSTLHLNAAEALQNVLCVLSPSGEGETTITKAVTLTGSPMSTPPTTRIRRSEQELQKAAECVQKGMTFQNVSDIFKIPISTIRFYMARRGILPQRRRGRAALNQSAGVPSPHYLTMQFKLPDMGNPPKLPSP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00820857;
- 90% Identity
- -
- 80% Identity
- -