Basic Information

Insect: Maniola jurtina
Gene Symbol: -
Assembly: GCA_905333055.1
Location: HG995231.1:1565237-1579095[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 7.7e-05 0.0035 18.1 3.1 1 23 253 275 253 275 0.99

2 11 0.0093 0.43 11.5 2.0 1 23 283 306 283 306 0.94

3 11 0.00072 0.033 15.0 2.9 1 23 404 426 404 426 0.99

4 11 0.044 2 9.4 2.7 1 23 434 457 434 457 0.98

5 11 2.8 1.3e+02 3.7 2.0 1 23 461 483 461 483 0.96

6 11 0.00022 0.01 16.6 1.5 1 23 488 511 488 511 0.97

7 11 0.15 7.1 7.7 2.2 1 23 515 538 515 538 0.89

8 11 0.24 11 7.0 0.1 2 19 557 574 556 577 0.91

9 11 2.4e-06 0.00011 22.8 1.2 1 23 651 673 651 673 0.98

10 11 0.00055 0.025 15.4 0.7 1 23 679 701 679 701 0.96

11 11 7.2e-06 0.00033 21.3 2.6 1 23 707 730 707 730 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	7.7e-05	0.0035	18.1	3.1	1	23	253	275	253	275	0.99
2	11	0.0093	0.43	11.5	2.0	1	23	283	306	283	306	0.94
3	11	0.00072	0.033	15.0	2.9	1	23	404	426	404	426	0.99
4	11	0.044	2	9.4	2.7	1	23	434	457	434	457	0.98
5	11	2.8	1.3e+02	3.7	2.0	1	23	461	483	461	483	0.96
6	11	0.00022	0.01	16.6	1.5	1	23	488	511	488	511	0.97
7	11	0.15	7.1	7.7	2.2	1	23	515	538	515	538	0.89
8	11	0.24	11	7.0	0.1	2	19	557	574	556	577	0.91
9	11	2.4e-06	0.00011	22.8	1.2	1	23	651	673	651	673	0.98
10	11	0.00055	0.025	15.4	0.7	1	23	679	701	679	701	0.96
11	11	7.2e-06	0.00033	21.3	2.6	1	23	707	730	707	730	0.98

Sequence Information

Coding Sequence: ATGTTTGACCTCAAAGTGTGCACGGTGTGTTTACAAATGGATGTAAGATGTTACAACATGAATGCGAATAGTGGTCAATTGAGGAAGGATTACAATATGATTGCAGGTTTAGAGACCCAGCATGGAAATGGTTTACCTGAATACTTGTGCTACCAGTGCACAGCTCAGGTGCAAAAATGCAAAAGTTTTCGTGACAGGTGTCAAAGGGCATATTTTGTCCTACGAGAGATATTACATAGGAATAAAGAGATAACAAAACCCATCATCGAAGAATTAGATGCTAACACATTAAACATTGGTCCAACTTTGTCATTCCTCAGTAAAGAAAGTGTTAAATCAAAGTTTGACAGAGTAAAGTTTAAATGGATCAAAACGATTCGCATGAGCATAGACCCTCAGGAAAAGATACCTGTGATACAATACGGACCTCAGTACGACCAAATGTCCTTTGAAGAAGCAACTCAGAAAGTAACAGAAAGTAGTATTAAAAACGAGAATGACTGTGTAGATCTAACGAATGAAGATTGCAATACAGAATTGGATGTGACAGAAAATTTTTTCAATGTCGATTATGAATATCAGAATGATAAAGATTTTGATGTTGATATTGATATAGATACTAACGAAATTGATACAAAAGTTGATATGGATGCAGACGGGTCTCAGTTGAATGAGGAATACGCGATCATGGTTCCTATAAGTATGAACGAAGCAAGCGCGGCGGCTGAGATTTGTAAATTGGCTACGAAGGGCAAATATAAGTGCAATGTTTGCGAGAGGACGTACTGTAATGCAGACCGGCTTAAAGCTCATAAGAGGATGCATGAAAAGCATATAAGTGGAACGTATCGATGTGTGCTATGCGACTACTACTATAAGACTGAGTTCCTACTGAAAACACATATGACTGATAAACATATGTACAAGTACCTTTGCAGAGAGTGTCCGCAAGTCTCATTTGACAGACCTAGCGCAAAAAGGCATTTCGTGTGGACCCACATACAAAAAAAGAAACCCATCGCTGATCGAAAATCCAGACCGAAATGGTTGCGAACTAAAAAAGTTAAAAAAAGTAAAACACGCCCACAACAAGGGAAAAAATTGAACAAAATACCAAAAGATTTCCTCACTTACACGCCAATAAGTCAAGAAGAGCAGTACAGGTTGGTGAACGAGAGACAAAACAGTAGGAATTACATAGAGTCAATGTACAAGTGTGATTATTGCTTTAAAGGGTTCAGAGAAGACGTTACGTACACCAAACACATGCAGAAACATGATCCTGCTATCTCGGGCAACTACCAGTGCGACATGTGCAAGATATACTGCGTGAACGCGCGCAAGATGTACAAGCACATGAACATCACACATCTGTTCAAGTACACTTGCAAGCCGTGCAACTATGTGTGCTACAACAAGGGTCAAGCGGGGAACCATTATAAATGGCACCAGAATGTGACATACCCGTGTCCGCACTGCGATAAAGTGTTCTATAAGATATCGACGCGCCTGACGCACATCCGCATAAAGCACCCGTCGATGTACATCTGCAACCTGTGTGGACACAGCTTCGTCAGCGAGACCGGACTCTACTGCCACAAGAAAATTGCTCACAGCCAACAGGAAGTCGATGACGATACCGGCTCAGTGGATACATCTGACCCGCTGTACTGCTCGGAGTGCGGGATTCAGTTCCGCGATGACGCTGCCTTCGCTACCCACTTCGGGTCTTCCAACAAACATGCTGATACCAACCTATCGATAAAGCCGGTGCGCACCAAGGTCGCCCGCAAGGCCCGCGGCAGGCCGCGCCGCGACAACACCGACATCGTCAACAACGGCGTGCCCACCGCCACCAACTGCGAGATTTGTCAAGTGTTCCTGCCGTCGGACGCGGCCGCCAGCCGCCACTATGAGGCGGAGCACCCCGGTGCCGACTATCTCAAGCGATACATGTGCGACATCTGTGGACACACCACTAGGCAATACGCCAACCTAATGGTGCACATGCGCACGCACACGCGCGAGAAGCCGTACGCGTGCCCGCACTGCGAGCGCCGCTTCAGCATGCCGAGCAACAGGGACAGACATCTGGTGGTACACACAGGCGAAAAGCGCTACCAATGTCAACACTGCAACCGCCGCTTCACTCAGAGCAGTGCCGTCAAACTGCACATACAAACCGTCCACCTCAAGATCCCTTACGCGCCCTGGGATAAGAAGAACCGTAAGCGACGCCGCGAGGCCGAAGCCCCGCCCTCGCCGCCCCCCGCTCGCCCCACCACCACCACCCGGAGAATAGTGATAGACGCGGACAACTACTTGAGTGCATACATCACTTATAATGAGTAA
Protein Sequence: MFDLKVCTVCLQMDVRCYNMNANSGQLRKDYNMIAGLETQHGNGLPEYLCYQCTAQVQKCKSFRDRCQRAYFVLREILHRNKEITKPIIEELDANTLNIGPTLSFLSKESVKSKFDRVKFKWIKTIRMSIDPQEKIPVIQYGPQYDQMSFEEATQKVTESSIKNENDCVDLTNEDCNTELDVTENFFNVDYEYQNDKDFDVDIDIDTNEIDTKVDMDADGSQLNEEYAIMVPISMNEASAAAEICKLATKGKYKCNVCERTYCNADRLKAHKRMHEKHISGTYRCVLCDYYYKTEFLLKTHMTDKHMYKYLCRECPQVSFDRPSAKRHFVWTHIQKKKPIADRKSRPKWLRTKKVKKSKTRPQQGKKLNKIPKDFLTYTPISQEEQYRLVNERQNSRNYIESMYKCDYCFKGFREDVTYTKHMQKHDPAISGNYQCDMCKIYCVNARKMYKHMNITHLFKYTCKPCNYVCYNKGQAGNHYKWHQNVTYPCPHCDKVFYKISTRLTHIRIKHPSMYICNLCGHSFVSETGLYCHKKIAHSQQEVDDDTGSVDTSDPLYCSECGIQFRDDAAFATHFGSSNKHADTNLSIKPVRTKVARKARGRPRRDNTDIVNNGVPTATNCEICQVFLPSDAAASRHYEAEHPGADYLKRYMCDICGHTTRQYANLMVHMRTHTREKPYACPHCERRFSMPSNRDRHLVVHTGEKRYQCQHCNRRFTQSSAVKLHIQTVHLKIPYAPWDKKNRKRRREAEAPPSPPPARPTTTTRRIVIDADNYLSAYITYNE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00953863;
90% Identity: -
80% Identity: -