Basic Information

Insect: Maniola jurtina
Gene Symbol: -
Assembly: GCA_905333055.1
Location: HG995230.1:8386506-8397162[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.0037 0.17 12.8 0.5 1 23 243 265 243 265 0.99

2 11 0.042 2 9.4 2.9 1 23 272 294 272 294 0.98

3 11 0.096 4.4 8.3 0.8 1 23 298 321 298 321 0.91

4 11 9.9e-06 0.00046 20.9 1.5 1 20 328 347 328 349 0.95

5 11 0.0011 0.053 14.4 1.7 2 23 358 380 358 380 0.95

6 11 1.5e-06 7e-05 23.4 1.1 1 23 392 414 392 414 0.96

7 11 7.4e-05 0.0034 18.1 0.3 1 22 420 441 420 445 0.93

8 11 7.2e-06 0.00033 21.3 0.6 2 23 454 476 453 476 0.96

9 11 0.00027 0.013 16.3 0.6 1 23 482 505 482 505 0.96

10 11 0.0011 0.051 14.4 2.8 1 23 514 536 514 536 0.97

11 11 0.037 1.7 9.6 0.0 1 23 542 565 542 565 0.79

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.0037	0.17	12.8	0.5	1	23	243	265	243	265	0.99
2	11	0.042	2	9.4	2.9	1	23	272	294	272	294	0.98
3	11	0.096	4.4	8.3	0.8	1	23	298	321	298	321	0.91
4	11	9.9e-06	0.00046	20.9	1.5	1	20	328	347	328	349	0.95
5	11	0.0011	0.053	14.4	1.7	2	23	358	380	358	380	0.95
6	11	1.5e-06	7e-05	23.4	1.1	1	23	392	414	392	414	0.96
7	11	7.4e-05	0.0034	18.1	0.3	1	22	420	441	420	445	0.93
8	11	7.2e-06	0.00033	21.3	0.6	2	23	454	476	453	476	0.96
9	11	0.00027	0.013	16.3	0.6	1	23	482	505	482	505	0.96
10	11	0.0011	0.051	14.4	2.8	1	23	514	536	514	536	0.97
11	11	0.037	1.7	9.6	0.0	1	23	542	565	542	565	0.79

Sequence Information

Coding Sequence: ATGGGTACCAAAGATTCGACTTATTATTGTTTAGGATGTTTGTATCATATGGACGATAAACTAACGCAGCCGTATAATATCCAGAGTGAGGCTCTGAAAGCGTTATTAAAGGTAGACAACGTAAACTTATGTTACATTTGTAAGAAGATAGCACACAAAAGTGAACTATTTATACAGAATGTGCAAAGGAATCAGGTTTACTTGGAAAACTTTACAAATATTCTAGATTCAATAAGGACACCACAAAGCACCATACACAATTTTCAACCGTTGATCAATTTATCAAGTATATCTTTAGACAGAATTGAATTGACCAATGACAATGAAGATCTAGAGAAGCCCATTGTAGTATACAGTTCATGTAAAGACAATGTTGAGATTAAGTTAGAGTTAAAACAAGAATTGGCTTTGGATAATTATTTAGATGAGGAATTCTTTGATGATTATCAAGAGTCACCCATAAAAGAAGAAGAATGTATGTTAGATGAATTAAAAGACGACACCAATGAAATCCACGACGAGGTCAACTTAAAACAACTTAGAAGGACATTAAAAAAAGCAAAACTCAAAAACATATCAACAAACAAGCAAAAGAAACAGGGAAAACACAAAAATAGAGTCAGTGAAATAAAAGGTCAAGCAATAATAATAGTGTGTGTAACAAAAGAGCAAGTTATGAGAGAAAGGAAGAAAAAGCGTGAAGATGTAAAGTATAAGAATTTATCATACAAGTGCGAGGACTGCATCATTGGCTTTAATTTTAAAGAGACCTATGAAAAACATATGGAAATGCACAGTAAGGAAATGGGTCGATACAAATGTGATATATGCAAAAGAAGAATGAACACCATGGAAAAACTGTTACGCCATAAGAAATACCATCAAACACGCTACAAGTGTGGCGAGTGCGGTCTGACCCGTGTCCACAGGAAATCTATCAAGGAGCATTATACAGCTGCACACTTGAACCAATCGGTGCATTATTCATGCTCGCACTGCGATAAAGTGTTCAACCGCAAATTGTCGCTGAGAAGGCATTTGGCGTACGCGCAGAGAAGCGTCAGAAGTGCCACTTGCAAGTTTTGCAGCAAAACACTGAGCAGCAAGGAAGGCTTGAAGAACCATATCATGCTAAAGCACCCATCAGAAATGCCGGGGCAGACTTTCAAACATCACATCTGTTCTAAATGCGGCGCCGGCTTCAAAACCCCTTCGCAGCTCAAGAACCACATGATCAAGCACTCGGATAGAAAGGACTTCTATTGCGTGGAATGCGATAAGGGTTTCAAGTCAAGCTTCGCGTTGACGCAGCATCTGAAGATTGCATCTCCGCACGTCAACTATTTAGAATTAAAACTCCAATGTGACCAATGCGACAAAAGGTTCGGAGTGAAAAGAGATTTGGAGCGACATATGAACAGAATCCATCTCAACCGAAGACCCTACCAGTGCGACCAGTGTGACCGGGCATACGTAAACTTATGGTCGCTCACGGATCACAAGCGCTTTACACACGAGGGAGAAAAACGGCCCTTGAAACACCCCTGCCCGATGTGCGACAAAGTGTTTGCTCTCAAGTCTACATGTAAAGTGCATATGTATACGCATACCGGCGAAAGGCCATATCCCTGCCCAGAGTGTGACGCGACCTTCAACCAGCCCGGCATCCGCGCCACGCACGTCCGACTTGTACACATGCGCCTCGCGAGGGACGGCCGACCCAAGAAACACGCCGGCTAG
Protein Sequence: MGTKDSTYYCLGCLYHMDDKLTQPYNIQSEALKALLKVDNVNLCYICKKIAHKSELFIQNVQRNQVYLENFTNILDSIRTPQSTIHNFQPLINLSSISLDRIELTNDNEDLEKPIVVYSSCKDNVEIKLELKQELALDNYLDEEFFDDYQESPIKEEECMLDELKDDTNEIHDEVNLKQLRRTLKKAKLKNISTNKQKKQGKHKNRVSEIKGQAIIIVCVTKEQVMRERKKKREDVKYKNLSYKCEDCIIGFNFKETYEKHMEMHSKEMGRYKCDICKRRMNTMEKLLRHKKYHQTRYKCGECGLTRVHRKSIKEHYTAAHLNQSVHYSCSHCDKVFNRKLSLRRHLAYAQRSVRSATCKFCSKTLSSKEGLKNHIMLKHPSEMPGQTFKHHICSKCGAGFKTPSQLKNHMIKHSDRKDFYCVECDKGFKSSFALTQHLKIASPHVNYLELKLQCDQCDKRFGVKRDLERHMNRIHLNRRPYQCDQCDRAYVNLWSLTDHKRFTHEGEKRPLKHPCPMCDKVFALKSTCKVHMYTHTGERPYPCPECDATFNQPGIRATHVRLVHMRLARDGRPKKHAG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00953792;
90% Identity: -
80% Identity: -