Basic Information

Insect: Maniola jurtina
Gene Symbol: -
Assembly: GCA_905333055.1
Location: HG995233.1:2574004-2585637[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 0.12 5.3 8.1 3.6 1 23 242 265 242 265 0.91

2 19 0.011 0.5 11.3 0.3 3 23 292 313 290 313 0.96

3 19 0.00031 0.014 16.2 1.7 1 23 335 357 335 357 0.97

4 19 0.12 5.6 8.0 1.8 1 23 401 423 401 423 0.96

5 19 0.036 1.7 9.6 0.0 3 23 453 474 451 474 0.94

6 19 0.026 1.2 10.1 0.2 2 23 495 517 494 517 0.95

7 19 0.00059 0.027 15.3 2.6 2 23 523 545 522 545 0.95

8 19 0.0064 0.3 12.0 0.6 1 23 550 573 550 573 0.93

9 19 1.7 78 4.4 0.1 2 23 576 598 575 598 0.94

10 19 0.032 1.5 9.8 1.4 2 21 605 624 604 625 0.93

11 19 0.035 1.6 9.7 0.4 1 23 682 705 682 705 0.95

12 19 0.61 28 5.8 0.1 3 23 734 755 732 755 0.94

13 19 0.14 6.7 7.8 0.2 3 23 779 801 777 801 0.94

14 19 0.00097 0.045 14.6 0.6 3 20 808 825 806 829 0.90

15 19 0.078 3.6 8.6 0.6 1 23 834 857 834 857 0.97

16 19 0.00085 0.039 14.8 0.2 2 23 863 885 863 885 0.92

17 19 7.2e-05 0.0033 18.1 4.7 1 23 889 912 889 912 0.97

18 19 0.12 5.4 8.0 2.2 2 23 919 940 918 940 0.96

19 19 0.0092 0.43 11.5 2.1 1 23 946 968 946 968 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	0.12	5.3	8.1	3.6	1	23	242	265	242	265	0.91
2	19	0.011	0.5	11.3	0.3	3	23	292	313	290	313	0.96
3	19	0.00031	0.014	16.2	1.7	1	23	335	357	335	357	0.97
4	19	0.12	5.6	8.0	1.8	1	23	401	423	401	423	0.96
5	19	0.036	1.7	9.6	0.0	3	23	453	474	451	474	0.94
6	19	0.026	1.2	10.1	0.2	2	23	495	517	494	517	0.95
7	19	0.00059	0.027	15.3	2.6	2	23	523	545	522	545	0.95
8	19	0.0064	0.3	12.0	0.6	1	23	550	573	550	573	0.93
9	19	1.7	78	4.4	0.1	2	23	576	598	575	598	0.94
10	19	0.032	1.5	9.8	1.4	2	21	605	624	604	625	0.93
11	19	0.035	1.6	9.7	0.4	1	23	682	705	682	705	0.95
12	19	0.61	28	5.8	0.1	3	23	734	755	732	755	0.94
13	19	0.14	6.7	7.8	0.2	3	23	779	801	777	801	0.94
14	19	0.00097	0.045	14.6	0.6	3	20	808	825	806	829	0.90
15	19	0.078	3.6	8.6	0.6	1	23	834	857	834	857	0.97
16	19	0.00085	0.039	14.8	0.2	2	23	863	885	863	885	0.92
17	19	7.2e-05	0.0033	18.1	4.7	1	23	889	912	889	912	0.97
18	19	0.12	5.4	8.0	2.2	2	23	919	940	918	940	0.96
19	19	0.0092	0.43	11.5	2.1	1	23	946	968	946	968	0.97

Sequence Information

Coding Sequence: ATGGAGTTTGACGAAATTGTGGTAAAAGAGACCCCAGGGTTGTGCCGGTGCTGCCTGTCCGAGGGGTGTTACAAGGATTTGAGCACCGAATACACTTGGATGGAAGAACAAGAAATTTATGCCGATATGCTATTGGAATGCTTTGATATTAGTATATCCCAACACATGGAAGGCCCCAACGGCCCAAACCGACTGATCTGCGAAGTATGCATCACACGGCTACGTGATGCTTGTAACTTCAAGAAGCAAGTACTGGAGTCGGAGAAGAAGTTTGTTGACATGGTGGGGAGGGGGGAGTTCAAGGCTAGAGCGATAGCATACACAGAGCCTATGAAGTCAGAAATCATCTTAGAACTGCAACCAGTTGATGAAACAGAAGTAGAATACTTGGACGATGACATGGATTACGATGATGGAAACAAAGACGACCCAGAACCCACGGTTTCAGAAGACTTAACAGTAACAGCATTACCCGTTAAGGGCAAACGGGGGCGACCCAAAAAGACCATAGTCAAACCGGAGAAGAAGAAACCCAAAACTGAGGAGAAACCCAAAACCAAGATCGCTAAAGGTCAAAATCGCCAAGAAACGGCCACTGAGGCGCTGAGTAAGTCCTCACAGACCCAAATGTCAGCGACAAAACGAAACCGCCTAATGAAAAAGAACGCAATAATCGTTCTGGAATCTTCTACCGTGGTACCATTCAAATGGCATCGCCACAACTACTTATGCTTCTTCTGTCATCGGACTTTCAAAACCCTAACACCATTGAAAGAACATACCACCAACGAACACAAAACGTCCAGTGTAAAATCTGCGGTGTCATACCTTAAAAGAGATGAAAAAGTTAAAATTGACGTTTCAAAGGTTAACTGTCGAATTTGTGACCAAAATTTCGAAAATATTAATACACTTGTAGACCATCTTAAAACTAATCATGAAGTAATCTTCAATGAAGATAGTGATTTCGGTATCGTACCGTACATACTAAGCGATAACGGACACCAATGTGCGTTATGTGGAAAGAGTTTCGAATACTTCATTAAACTAAATCAACATATGAACGAACATTACGGGAACTATGTTTATGTAAAACCTCGGAAACGCAAAGCCAGCGAATCGTCGTCCATGCGTAGAAGGAAAAACCTACAGTTGCTATTCAATAACACAACGATTATACCATTCAAATGGCGAGGCAGATATTTATGCTTCTATTGCAGCAAAGATATATCGGAGTATAACGAACTAAAGAAACATACTAAATCGCACGGCGACTGTTCAACTATGGATCATTCTCTCAAAGTCCTCAAAGGTGGACAGAATATGGAAATCAAAATAGATATATCCGAAATTAATTGCGAAATTTGCAGCGAAGAATTTCCTAGTTTTGATAATATAATCAATCATTTATTAATCAAACACAAATTGGAATACGACAGAGATGTCGAAATGGCTTTGGAGGAATACAAATTAGTTGATCTAAGTTGTTTAATCTGTGAAGAAAAATTCACGTATTTCGGTTATTTAGTTTCCCATGTAAACAGTAACCATCCGAAAAACTGTCTTATTTGCGACAAATGTAATCAAAAGTTTAATAAGAAAAGGGATTTGTTTTCGCACATGAAAAATTATCATAGAGAAGGGGGATACATATGCGATATATGTCCTCAGAGTTTCAGTTCGCTAAACATACTGAGAAAACATAGGACTAACAGACATATGACTAGATGCAGCATTTGTTTTTTACGACTACCCTCGGCTGTGTTAAAGCAAAAGCACATGGCTATAGAACATCCGGACGACGGCTCCTTGCAATGCGATATTTGTTACAAGGACTTTCACACCAAACAGGGTCTAAAAATGCATTCACGTAAATGCAAAGGAGACATTTTCGAAATCGGTGTAAAGAAAGAAGAGTATGATATGGATTTGGATAACAATTATGAGGGTACTAAAAAACCGAGCGTCAAACAAATTCGAGAGAATATTGTCACAGTCATAAACATGTCGACAGCCATACCGTTTAACTTCTACAAGAATAAATTCAACTGTTTCTATTGCTCTCAAGATTTTGGTGATTCAGATTCAATGAGAGAACATACTTTAATCGAACATCCAGTGTGTGACGTTAAAGAAAAGTGCATCAGAAAATGCAGGGAATCGGTTGCATGCGTAAAAATCGATATTTCGTCATTAGCTTGCAAGATCTGTTTCGAATCGATGAGTGATTTAGACAAACTTCTGGATCATCTTATTGTAAAACATCAGGCGAATTATGACAAGTCGATAACCACATGTTTGCAGCCATACAAATTGATAAAAGACCATATGGCATGTCCGAATTGCCCCAACGAAGTTTTTCGATTTTTCGGAACTCTGCTGAAACACATGAACAATGAGCATACAAATAATAATATCATCTGTGTGTATTGCGGGCAGACTTTTAGACGCGATCAAAATTTAAGAGTTCACATATGGAGACATCATAGGGACGGGAGATTCAAATGTTCCATTTGTAATGCCGAATGCAATATACCCTCAAGATTGTATATGCATATGGCCAAAGCTCATGGTGTCAAAGCGGCTAAATGTCCGAAATGTCCGGAGAGTTTTGCTACCCAATATCTACGTCAGAAACATTTGATTGACGCACACGATTCAGGACATAAATGTAGTTATTGTGGAAAGTTGTTTACAAGGAACTCGTTCATGAGGGATCATATTAGACGGACTCATTTGAAGGAGAAGAATGTTGAGTGTTCAATTTGTTGCATGAAGTTCTTTAACAATATACTCTTGCGTCGTCATATGGTCAAACATAGTGGGGAGAAGAATTTTCACTGTGAAATGTGTGGGGAAAGGTTTTATTGGCGCAAGAGTTTGCGTACCCATATAGCCAGACATAATAAGCAAATAAGTCCTATGTAA
Protein Sequence: MEFDEIVVKETPGLCRCCLSEGCYKDLSTEYTWMEEQEIYADMLLECFDISISQHMEGPNGPNRLICEVCITRLRDACNFKKQVLESEKKFVDMVGRGEFKARAIAYTEPMKSEIILELQPVDETEVEYLDDDMDYDDGNKDDPEPTVSEDLTVTALPVKGKRGRPKKTIVKPEKKKPKTEEKPKTKIAKGQNRQETATEALSKSSQTQMSATKRNRLMKKNAIIVLESSTVVPFKWHRHNYLCFFCHRTFKTLTPLKEHTTNEHKTSSVKSAVSYLKRDEKVKIDVSKVNCRICDQNFENINTLVDHLKTNHEVIFNEDSDFGIVPYILSDNGHQCALCGKSFEYFIKLNQHMNEHYGNYVYVKPRKRKASESSSMRRRKNLQLLFNNTTIIPFKWRGRYLCFYCSKDISEYNELKKHTKSHGDCSTMDHSLKVLKGGQNMEIKIDISEINCEICSEEFPSFDNIINHLLIKHKLEYDRDVEMALEEYKLVDLSCLICEEKFTYFGYLVSHVNSNHPKNCLICDKCNQKFNKKRDLFSHMKNYHREGGYICDICPQSFSSLNILRKHRTNRHMTRCSICFLRLPSAVLKQKHMAIEHPDDGSLQCDICYKDFHTKQGLKMHSRKCKGDIFEIGVKKEEYDMDLDNNYEGTKKPSVKQIRENIVTVINMSTAIPFNFYKNKFNCFYCSQDFGDSDSMREHTLIEHPVCDVKEKCIRKCRESVACVKIDISSLACKICFESMSDLDKLLDHLIVKHQANYDKSITTCLQPYKLIKDHMACPNCPNEVFRFFGTLLKHMNNEHTNNNIICVYCGQTFRRDQNLRVHIWRHHRDGRFKCSICNAECNIPSRLYMHMAKAHGVKAAKCPKCPESFATQYLRQKHLIDAHDSGHKCSYCGKLFTRNSFMRDHIRRTHLKEKNVECSICCMKFFNNILLRRHMVKHSGEKNFHCEMCGERFYWRKSLRTHIARHNKQISPM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00802136;
90% Identity: iTF_00802136;
80% Identity: -