Mjur011210.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Maniola jurtina
Gene Symbol
-
Assembly
GCA_905333055.1
Location
HG995232.1:953406-981915[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 11 0.14 6.2 7.8 0.5 1 23 505 527 505 527 0.97
2 11 3.3e-05 0.0015 19.2 2.8 1 23 544 566 544 566 0.98
3 11 0.0022 0.1 13.5 5.4 1 23 572 594 572 594 0.99
4 11 0.00017 0.0078 17.0 3.0 1 23 601 623 601 623 0.99
5 11 8.9e-06 0.00041 21.0 0.1 1 23 629 651 629 651 0.93
6 11 3.2e-06 0.00015 22.4 0.0 1 23 657 679 657 679 0.98
7 11 4e-06 0.00018 22.1 1.3 1 23 685 708 685 708 0.96
8 11 0.00051 0.024 15.5 3.2 1 23 714 737 714 737 0.95
9 11 0.00048 0.022 15.6 1.6 2 23 744 765 743 765 0.96
10 11 2.2e-05 0.001 19.8 1.8 1 23 771 793 771 793 0.97
11 11 0.0015 0.07 14.0 0.8 1 23 799 823 799 823 0.94

Sequence Information

Coding Sequence
ATGATCTGTTTTATCTGCAACAAAATTACTGTAAGAAATGCTGTGAGCTTATTTGCTTCGGATCTATCTCTTAAATGTGATAAGAGCTTAATCACAACCGTTAGTGAGATAATTGAGAAAAAAATTAACAAGGATTCCGTTCACTCTGAGATACTGTGCAAAAAATGTCAAAAAAATGTATTGGAGTATGATTCACTGCAATATAGATTAAAAGTAGTTAAGACTGAAATTTTGGACAGTTTCAAAAGTTCATTACCCGCACACAATTTAAACTATGAAACATACAATGAAGATAATTCAAATAGTAACGTTTTGCCCAAAAATAATGTGGCAAAGAAGCTGGTGTTGCCAGCTTCGAAATTACAGCCTTTGCCACCTGGCTTTGTATTGACAGTCGGAAATTCTTCTATGCCTAAACCTGTCAAGATTCTGCCCAAACCAGCTACGGTTATGCCCAACTCGGCCACGGCCATGGCTAAACCTGTCACGATTATGCCTAAAATACAGAATGTAATGACTTTACCATCATCATCAACCCTGAATCTAAAAGTGACAGTTGGTACCTCAGTTTTGACCCAAAGCATCAACACTGTAACAAGCAAAACCAAATTGACACCTTTGACTATGGATCCAAAATTAATCACGACGTCAAAAGAAAACTCAAAAAACGACCATAACTCGACAAAATCAGTCAATTCAAGTAAAACTAGTTCAATATTAAGTTTCAATGTAAATTCGCTGCCAAAAGATTTTCTTTCATCTGCCATTTTGAAAGTTGATGCAGATTTTGATAAAACTACAACTGAGAAAGAGAATGATGAATTGGAAAACCATGAAGATTCGATGGAAATTGATGAAGATTGTTCGATGACGGGATTAACGAAAAGTTCACGGCACAAACTACAATTTGAAGGAGATAATGTGATAACGGTGGATGATGAAGAAAATAAGTCTGAAACAGAATACCTAGACATGAAACTGTTGGAAGGTACAGACAGACAATATGTGTTGGGGAAAATAATATTAGAAGACGACGGAGACAACGACGGCGATTTAGAGGAACACACAATACTAATGGACAGTGAGAGCGGGTCAATAATCCGGGTGATGTCGGGGCAAAAGATACTGTGCAGTGAAGACGGACAAATCTCGTTCGTGGATGAAAACGACGCCGACGCGAGCCAAGATTCAAATGACGAGTCCCAAATAGAGTTACAAGTATCGGGAGATGAAGAAACCGCCAACGCTATCATCGCGGCGGCGCAAGAACAGGGTGGTGCATTCATAAAAGTGGAATCAGGCGAGATGTACAGAGTGCAGTCAGTGGAAAGCAAAACCGAAGAAGACGACAGTCTAAAACTGGAGACACAGTCGGCGATGATAAGTAATGAAGATGGTCAGTTTCGATGCCTTATGTGCGAGAGAAATAATGAGAATACAGAAGAGGCGATATTCGTGGGTGACTCGGAAGCCACTATGGAGCACTTGAAAACCTTCCATTCAGCGAGGCTATACATCTGCCGAATTTGTGGACACGTGGAGAGAAAGAAAAGCGACTATGCTGTACATTTGGAGAGCCACAATGGTAAGATCAGCAAACCCGTGCAGACTGCGCTGAAGCCGAGAATACACGAATGCAATATTTGCGACAAGAAATACCATTCCCGCGCCTTATTGACGGCTCACATGAACATGCACAGCGGGTCCCGCCCGTACACCTGCAATGTATGCAAGAAAACCTTCGCCTCCAAGTACACCCACCAGTCTCATCTCAAAACACATCTTGACCGCCCCAGGCCGTACAAGTGTCGGCAGTGCGACAAGTCTTTTTTCACCGTACAAAACTTGAGTCAACACGAGAAAACCCACTCCAATGTCAAGGACTTTGTTTGTAATATTTGTGGTAAAGCGTTCGGAACCCAGCATAATTTAGAAGTGCATGGCGTAGTACATTCGGGGAGCAAACCCTTCGTGTGCGGAATTTGCGGAAAAGGGTTCGCAAGGCGTGCGGAAGTGCGGGACCATATGCGGATACACACAGGTGAACGCCCATTTGTATGTGATATCTGTGGAGCGAGCTTCACGCAGAGATCGAACCTACACTCCCACAAACGAGCAACACATCTGGACGACAAGCGGTACCACTGCACCGAGTGCCCCAAGAAATTCAAAAGGAGACGGTTGCTGGACTACCACATAAAGGCGTCGCACACAGGCGAGCGCCCGCTGTCGTGCGAGGTCTGCCACGCCACGTTCGTGTACCCCGAGCATTATAAGAAGCACGCTCGAATACACAGCGGGGAGAAACCCTACAAGTGTGAGGTGTGCGGAAAGTCGTTCAACTCTCGCGACAACCGCAACACGCATCGCTTCGTCCACAGCGACCGGAAGCCGTACGAGTGCGTCGTTTGCGGAACCGGATATATGCGGAAACAGCTGCTCTACCATCACATGAACACTAGCGGCCATCTAGCGGAGTCAATAGTAGTTAATCATCCAAGGGTCACTAAACAGGGTGAAAATGTGGTGGTCGTCGAGAGTAAGACGAACAAATTACCTATATTCGCGGCTTCCGAAGAGTCTGAAGCGTTAGGATCAGATGACAAAAACGGCAAAACAACTATAAGTTTAGTGCAAGCGAGTGAAGATTCTACCTTATTGACATTACATAACGTGGAGGGTGAGATGGATCCCCTGGCCGAAAACACCCTCGAGGACCAACAGTCAAGCCCCCAGTTCCGGTTAGTGCCAATCAACCTTCCTGATGGCAGCAGCGGATGGGTGGCCATCAACACTTAG
Protein Sequence
MICFICNKITVRNAVSLFASDLSLKCDKSLITTVSEIIEKKINKDSVHSEILCKKCQKNVLEYDSLQYRLKVVKTEILDSFKSSLPAHNLNYETYNEDNSNSNVLPKNNVAKKLVLPASKLQPLPPGFVLTVGNSSMPKPVKILPKPATVMPNSATAMAKPVTIMPKIQNVMTLPSSSTLNLKVTVGTSVLTQSINTVTSKTKLTPLTMDPKLITTSKENSKNDHNSTKSVNSSKTSSILSFNVNSLPKDFLSSAILKVDADFDKTTTEKENDELENHEDSMEIDEDCSMTGLTKSSRHKLQFEGDNVITVDDEENKSETEYLDMKLLEGTDRQYVLGKIILEDDGDNDGDLEEHTILMDSESGSIIRVMSGQKILCSEDGQISFVDENDADASQDSNDESQIELQVSGDEETANAIIAAAQEQGGAFIKVESGEMYRVQSVESKTEEDDSLKLETQSAMISNEDGQFRCLMCERNNENTEEAIFVGDSEATMEHLKTFHSARLYICRICGHVERKKSDYAVHLESHNGKISKPVQTALKPRIHECNICDKKYHSRALLTAHMNMHSGSRPYTCNVCKKTFASKYTHQSHLKTHLDRPRPYKCRQCDKSFFTVQNLSQHEKTHSNVKDFVCNICGKAFGTQHNLEVHGVVHSGSKPFVCGICGKGFARRAEVRDHMRIHTGERPFVCDICGASFTQRSNLHSHKRATHLDDKRYHCTECPKKFKRRRLLDYHIKASHTGERPLSCEVCHATFVYPEHYKKHARIHSGEKPYKCEVCGKSFNSRDNRNTHRFVHSDRKPYECVVCGTGYMRKQLLYHHMNTSGHLAESIVVNHPRVTKQGENVVVVESKTNKLPIFAASEESEALGSDDKNGKTTISLVQASEDSTLLTLHNVEGEMDPLAENTLEDQQSSPQFRLVPINLPDGSSGWVAINT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00953783;
90% Identity
-
80% Identity
-