Basic Information

Insect: Maniola jurtina
Gene Symbol: Sall1
Assembly: GCA_905333055.1
Location: HG995223.1:268211-270177[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.00034 0.016 16.0 0.1 2 23 176 197 175 197 0.98

2 11 0.00023 0.011 16.5 1.4 1 23 203 226 203 226 0.95

3 11 0.00013 0.0059 17.4 0.8 1 23 233 255 233 255 0.98

4 11 9.5e-06 0.00044 20.9 1.2 1 23 261 283 261 283 0.99

5 11 8.3e-06 0.00038 21.1 0.8 1 23 289 311 289 311 0.97

6 11 0.0019 0.087 13.7 0.8 1 23 317 339 317 339 0.96

7 11 7.7e-06 0.00036 21.2 0.5 3 23 347 368 346 368 0.97

8 11 0.024 1.1 10.2 0.8 2 23 374 392 373 392 0.87

9 11 0.0032 0.15 13.0 0.4 1 23 398 421 398 421 0.94

10 11 0.0061 0.28 12.1 0.4 1 23 427 452 427 452 0.95

11 11 5.1e-05 0.0023 18.6 1.9 1 23 458 481 458 481 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.00034	0.016	16.0	0.1	2	23	176	197	175	197	0.98
2	11	0.00023	0.011	16.5	1.4	1	23	203	226	203	226	0.95
3	11	0.00013	0.0059	17.4	0.8	1	23	233	255	233	255	0.98
4	11	9.5e-06	0.00044	20.9	1.2	1	23	261	283	261	283	0.99
5	11	8.3e-06	0.00038	21.1	0.8	1	23	289	311	289	311	0.97
6	11	0.0019	0.087	13.7	0.8	1	23	317	339	317	339	0.96
7	11	7.7e-06	0.00036	21.2	0.5	3	23	347	368	346	368	0.97
8	11	0.024	1.1	10.2	0.8	2	23	374	392	373	392	0.87
9	11	0.0032	0.15	13.0	0.4	1	23	398	421	398	421	0.94
10	11	0.0061	0.28	12.1	0.4	1	23	427	452	427	452	0.95
11	11	5.1e-05	0.0023	18.6	1.9	1	23	458	481	458	481	0.96

Sequence Information

Coding Sequence: ATGGAGGTTTTAATATGTCGAATTTGCCTGGACAAAACGGGCACGATATCCGTGTTTGATAGTGAATCGGACAACGTTCAATACAGTGCGAAGTTGAAGAAACTGGTTAATATTATGGTTTCTGAAGACGATGGATTGCCGAGCATGATGTGTGAAGGCTGCACGGCCGAGTTGTCACTCTCGTATCAGTTCGTGCAAAAGTGTGAAGCTTCGGACGGCGCGCTTCGCTGCCTGAGTGCTCCTATCGAACTTTATTCCGACTTGCAAGCTGAAAGGCATCCGACAGATATTAAAGCGGAAGAAATTAAAAATGAAATCGACGATGGTGCTCATGGGTTTGACAACAGTTTTCTGTTTGAAAGGAATGTTGCCGCTAATAAAGGTATGGAGGATCAAAACAATGTTGCTAGTAATATCGATGTTGCAGTCGAATTTAGCTTCGAGGACAGTAATGAGAAGAGTGATAGAAATGTCCGAGGTAAAGTTAATCATAAGAAAGTCCGGCGTGGCAAAGTAGGGCCTGTACAATGTGTTATTTGTGGTCACATGGCCTCCAGTGCTTCTGCGATGGAGATTCACATGCGCACGCACACCGGAGAGAAACCCTTCGTGTGCGAAACCTGCAGCACTAAGTTCCCCACCAGAGGATCCTTAAAACGACACAATGAAACATTCCATTCGACCCGAGAAAGAAAATTCACTTGTGAAACATGCGGCAGTAGTTTTTACAGAAAAAATGATATTATAACACACTTGCGAGTTCACACTGATGAACGGCCATACGTCTGTCCGTATTGCTCCAAGAGGTTCCGTCAGATAGCTTCAAGGAACCGCCACCAAAGGGTTCACACTGGAGAAAAACCCTTTGCATGCCCGATATGTGGTAAAAAGTTTGGTCATAAAGGTTTGGTCAAAAAACATCAAAGTGTCCATAGCGAAGAAAGAAAATATATATGTCATCTGTGCAGCAAGTCTATGAAGACAAGAACAGCTCTGAACGTTCATATAGCTCTTCATACCAATAAAAAGCAGAATATATGCAACTTCTGTGGTATGGCATTCTCCATGAAAGGCAACCTGCAGACTCACATCCGTCGCATGCATTCTGAAAAATCTGGGCAGTGTTCCGTTTGCCTTCAAACATTTTCTGATTTAAAAGTGCACATGCGCAAGCATACGGGGGAAAAGCCTTACGTTTGTGGAACATGTAATGCTGCATTTGCTGTCAAGAGAAGTCTGGCTCACCACATATTGTTCAAGCATGAGAATGCTGGGAAATTCAAATGTTCCATAGGAGACTGCACCAAGTCCTTCCCCACGGCCACCATGCTAGAGTTCCACCTCCTCAAGCAGCACACCAATCACACTCCTTACGTATGCCAGCACTGCCCGCGAAGTTTTTTCCGCGGCAGCGATCTTTCGCGACACCTTAAAGGAACCCATATGGATCTAAACTTTAAGTCTACACTTAAAACTCTGATACATAAGCAAGCAACTTATACTTAA
Protein Sequence: MEVLICRICLDKTGTISVFDSESDNVQYSAKLKKLVNIMVSEDDGLPSMMCEGCTAELSLSYQFVQKCEASDGALRCLSAPIELYSDLQAERHPTDIKAEEIKNEIDDGAHGFDNSFLFERNVAANKGMEDQNNVASNIDVAVEFSFEDSNEKSDRNVRGKVNHKKVRRGKVGPVQCVICGHMASSASAMEIHMRTHTGEKPFVCETCSTKFPTRGSLKRHNETFHSTRERKFTCETCGSSFYRKNDIITHLRVHTDERPYVCPYCSKRFRQIASRNRHQRVHTGEKPFACPICGKKFGHKGLVKKHQSVHSEERKYICHLCSKSMKTRTALNVHIALHTNKKQNICNFCGMAFSMKGNLQTHIRRMHSEKSGQCSVCLQTFSDLKVHMRKHTGEKPYVCGTCNAAFAVKRSLAHHILFKHENAGKFKCSIGDCTKSFPTATMLEFHLLKQHTNHTPYVCQHCPRSFFRGSDLSRHLKGTHMDLNFKSTLKTLIHKQATYT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00802138;
90% Identity: iTF_00953761;
80% Identity: -