Basic Information

Insect: Hipparchia semele
Gene Symbol: Sall1
Assembly: GCA_933228835.1
Location: CAKOGE010000022.1:266684-268210[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.001 0.054 14.3 0.1 2 23 183 204 182 204 0.98

2 11 7e-05 0.0037 18.0 1.1 1 23 210 233 210 233 0.95

3 11 3e-05 0.0016 19.1 0.8 1 23 240 262 240 262 0.98

4 11 8.2e-06 0.00044 20.9 1.2 1 23 268 290 268 290 0.99

5 11 2.6e-06 0.00014 22.4 1.1 1 23 296 318 296 318 0.97

6 11 0.0046 0.24 12.2 0.8 1 23 324 346 324 346 0.95

7 11 1.8e-05 0.00097 19.8 0.2 2 23 353 375 353 375 0.96

8 11 0.0043 0.23 12.3 1.1 2 23 381 399 380 399 0.84

9 11 0.0022 0.12 13.2 0.4 1 23 405 428 405 428 0.96

10 11 0.0055 0.29 12.0 0.4 1 23 434 459 434 459 0.95

11 11 9.6e-06 0.00051 20.7 2.1 1 23 465 488 465 488 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.001	0.054	14.3	0.1	2	23	183	204	182	204	0.98
2	11	7e-05	0.0037	18.0	1.1	1	23	210	233	210	233	0.95
3	11	3e-05	0.0016	19.1	0.8	1	23	240	262	240	262	0.98
4	11	8.2e-06	0.00044	20.9	1.2	1	23	268	290	268	290	0.99
5	11	2.6e-06	0.00014	22.4	1.1	1	23	296	318	296	318	0.97
6	11	0.0046	0.24	12.2	0.8	1	23	324	346	324	346	0.95
7	11	1.8e-05	0.00097	19.8	0.2	2	23	353	375	353	375	0.96
8	11	0.0043	0.23	12.3	1.1	2	23	381	399	380	399	0.84
9	11	0.0022	0.12	13.2	0.4	1	23	405	428	405	428	0.96
10	11	0.0055	0.29	12.0	0.4	1	23	434	459	434	459	0.95
11	11	9.6e-06	0.00051	20.7	2.1	1	23	465	488	465	488	0.96

Sequence Information

Coding Sequence: ATGGAGGTCCTAATATGTAGAATTTGCCTGGACAAAAAAGGCACGATATCCGTTTTTGAATGTGAACCTGATAACGTTCAATACAGTGCGAAGTTAAAGAAATTGGTCAATATTATGGTTACGGAGGACGATGGACTGCCGAGCATGATGTGCGAAGGCTGCACCAACGAGTTGTCGCTCTCATATCAGTTCGTGCAGAAGTGTGAAGCGTCAGACCGCGCGCTGcgttgtttgagcacccccatCGAACTGTATTCAGACTTGCAAGCGGAGAGGCACCAAACAGACGTCAAAGCGGGGCAAATCAAAGACGAAATCGAGGAAAGTGATCATGTCTTTGACAACAGCTTTCTGTTTGATACCACTTCACACACTGATAACGAAAAGAATATTGCTAAGAAGTGTAATAAGGAACAGAACTATGATCTCAGTAAAGATATTGATGCTGAAGAAGATTCTAACTTTGAAGACAGAGGCGAGAAATGTACTGATAATGTCAGaggtaaatgtaataaaaaagtcAGACGTGGGAAACTAGGGCCGGTTCAATGCGTGATTTGTGGCCACATGGCCTCTAGCCCTTCAGCCATGGATATACACATGCGTACACACACTGGAGAAAAACCATTTGTGTGCCCAACCTGCAACACTAAGTATCCCACTAAAGGGTCATTAAAGAGGCACAATGAAACATTCCATTCAACTAGAGAAAGAAAGTTCACTTGCGAAACATGTGGCAGTAGCTTTTACagaaaaaatgatattataacACACATGAGAGTTCATACTGATGAACGGCCATACGTCTGTCCATATTGTTCAAAGAGGTTCCGTCAAATAGCTTCTAGAAATCGCCACCAAAGGGTACACACTGGAGAAAAACCTTTTCCATGCCCAGTTTGCGGCAAAAAGTTTGGTCATAAAAGTTTGGTTAAAAAACACCAGAGTGTCCATAGTGAAGAGAGAAAATATATTTGTCATCTATGCAGTAAGTCTATGAAGTCGAGGACAGCTCTGAATGTCCATATAGGTcttcatacaaacaaaaaacagaACGTTTGTAGCTTCTGTGGCATGGCTTTCGCTATGAAAGGCAATCTGCAGACTCACATCCGTCGAATGCACTCCGAAAAATCAGGACAATGTTCAGTAtgcttaaaaacattttctgatTTGAAAGTGCACATGCGCAAGCATACGGGGGAAAAGCCTTATGTTTGTGGATCGTGTAATGCAGCTTTTGCTGTTAAAAGAAGTTTGGCCCACCACATGTTGTACAAACACGAAAATGCTGGGAAATTCAAATGTTCCATAGGAGACTGTTCCAAGTCCTTCCCCACCGCAACTATGCTAGAGTTTCATTTACTCAAACAGCATACAAACCACACTCCGTACGTATGCCAGCATTGCCCACGACGTTTCTTCCGTGCCAGTGATCTGTCGCGACATCTAAAAGGCACCCATATGgaactaaattttaaatctaCACTAAAATCCCTTATTCCTAAGCCCATAACTTATGCTTAA
Protein Sequence: MEVLICRICLDKKGTISVFECEPDNVQYSAKLKKLVNIMVTEDDGLPSMMCEGCTNELSLSYQFVQKCEASDRALRCLSTPIELYSDLQAERHQTDVKAGQIKDEIEESDHVFDNSFLFDTTSHTDNEKNIAKKCNKEQNYDLSKDIDAEEDSNFEDRGEKCTDNVRGKCNKKVRRGKLGPVQCVICGHMASSPSAMDIHMRTHTGEKPFVCPTCNTKYPTKGSLKRHNETFHSTRERKFTCETCGSSFYRKNDIITHMRVHTDERPYVCPYCSKRFRQIASRNRHQRVHTGEKPFPCPVCGKKFGHKSLVKKHQSVHSEERKYICHLCSKSMKSRTALNVHIGLHTNKKQNVCSFCGMAFAMKGNLQTHIRRMHSEKSGQCSVCLKTFSDLKVHMRKHTGEKPYVCGSCNAAFAVKRSLAHHMLYKHENAGKFKCSIGDCSKSFPTATMLEFHLLKQHTNHTPYVCQHCPRRFFRASDLSRHLKGTHMELNFKSTLKSLIPKPITYA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00953761; iTF_00205396; iTF_01021538; iTF_00954855; iTF_01151432; iTF_00353362; iTF_00354383;
90% Identity: iTF_01092306;
80% Identity: -