Mjur012126.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Maniola jurtina
Gene Symbol
-
Assembly
GCA_905333055.1
Location
HG995236.1:5288702-5297094[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 14 0.005 0.23 12.4 3.0 1 23 296 318 296 318 0.98
2 14 0.00014 0.0064 17.3 3.2 1 23 538 560 538 560 0.98
3 14 0.51 24 6.0 2.0 6 23 571 588 569 588 0.90
4 14 1.5e-06 6.9e-05 23.4 3.8 1 23 594 616 594 616 0.99
5 14 2.2e-05 0.001 19.7 5.7 1 23 622 644 622 644 0.99
6 14 0.0016 0.075 13.9 4.6 1 23 650 672 650 672 0.98
7 14 1.1e-05 0.00053 20.7 4.7 1 23 678 700 678 700 0.99
8 14 1.4e-05 0.00063 20.4 2.4 1 23 706 728 706 728 0.99
9 14 5.1e-05 0.0024 18.6 3.7 1 23 734 756 734 756 0.99
10 14 2.5e-05 0.0012 19.6 4.5 1 23 762 784 762 784 0.99
11 14 7.8e-06 0.00036 21.2 2.9 1 23 790 812 790 812 0.99
12 14 1.8e-05 0.00083 20.1 3.4 1 23 818 840 818 840 0.98
13 14 4.2e-06 0.0002 22.0 2.6 1 23 846 868 846 868 0.99
14 14 5.6e-06 0.00026 21.6 2.7 1 23 874 896 874 896 0.99

Sequence Information

Coding Sequence
ATGCGTTGTTGTGTGCCATTCTGCACAAATACTCCCACCAATGTGTCAACATCTGAGTCGAAGGGGATCAGTTTTCACGCTCTCCCCAGTGATGTGTGTCTGCGCGCTGCTTGGCTCAGAGCCCTCGGCAAACAAGACAGTCAGCTACCAGACTCTGCTGTGGTCTGCTCCCAGCATTTTCTTGATGATGAAATGTATGAAACAGAAAGTGGCTTAAGGCAGATTGCTACTGGTGCTGTTCCTTCAACAGTGCAGGTTTGCATGATATGTCTAAACACTGACAACAAGCTGTATCTAATGAGTAAACACAAATTGGAAGAAGCATATGAGCGGTTAACCGGATATCCATTGTATGATCAAGGAAACCTGAAACAAACACTTTGTGTACAATGTGCTCAGAGACTAATAAACTTTAGTAGATTCAGAGACAAGAGCTTGAGAGCCCGTGCACTGATGATGGACTTAGTTGAAAAACATGAATTAATAACACGGCGACATATCAAAGGGATAAACCGCACAAAGAACCAACTAAAGAGTAATTTTGTGATGAAAACTCTAGGACCTGACCACTGTGACTTATACATACTGGACTCCACAGACAAACAGACAGAATCAGAGCCAATCGGCTATAGTGCTGTTGTGAAGAATGAAGAAAGTTTTGACTCGCCGGTTGATGAAGACATGGAAGTGGCAGAGGAAGATGACAATACTGCAGACAATGTCAATGATGAGTTAGATGCGTGTAAGGAGGAGTGCTTCTCTGAGGATAGCATAATGTTGGAAACGAAATTGCTGGATGATGTTATTTGCAAAGCTCTGGAGAACCCAGTATTTGCAGAACAAGTGGCTGAAATACCGGATTTGTTAAAGTGTGAAAGTGCTGCCTTCCAATGTACTTTATGTTCTGAGGAGTTTGTTAGTGAACATGCGTACATGCAACATATGCACATGCATGACCAGCAGAACAGTGACGGAAATGCTGACTGTAGCACGTCTCAAGTATGCAAGCCTCATACAGCCGTGAGCTCCTCACACTCTCCATGCCTCACTGAGAACAAGCAGGCCATTCCTCTGAGCCAGGCCTCGAGCCTGTCTGCACACAGCCCGTCTGCACACTCACCTCAAACTGCAGTCGCTCCTCTGTCCGCGAGACTTGCGCCGAGTAACGGAAACAAAGTGCAAGCTGAAGACGCCGATACAGTCCAGAAGAGTAAACCACTATTTAAAATTAACAATGTCGAATTAAACAACCAACTATTTGATACCAACAATGTAACTGACATTAATAGATTGACTGATTGTGTGGTCATATTATATGATATTTTCAAAAAGCCTGAAGAAGGTGTACCAATACAAGGTGAATCACTGGCGACAATGAGACCAAGTATTAGTTCTTGGGACAGTCAGCGTCATATTGAAAAGGCCTCTAAAGATTTTAACTGTCAGGCAGTTAGTCGGAATGAAGACACTAGACATACGATAGGAGACATTCAACCAGTTACTAACAAACTGAAAGTTACTGAGCTTAATGTTACGAAAACTTCACAAAGTAAAAGTTATTGTTCAAATAATTACAACAGTGAAGATAGTTTGCTTACTGACAAGAATGGGTATATTTGTGATGTATGTAGACATAAGTTTAAACGGAAAAGTGTCTTAGTTAAACACATAAAGACTCACAATGAAGTAAAACCGTTCACTTTCGAGTTTTGCCAATTCAAAGCCATACATAAATTTAGTTTAAAGAAACATATGCAAACTCACACGGGCGACAAACCATTTACTTGCGAGTTATGCGACTACAAATGTACACAAAATAGTAATCTAGTGCGACACATGAGAACTCACACGGGTGAAAAACCTTTTACTTGCGAGTTTTGCGATTACAAATGTGCACAATCAAGTCATTTAGTGAGACACATGAGAACTCACACGGGTGAAAAACCTTTTACTTGCGAGTTATGCGACTACAAATGTGCACAAAATAGTTGTTTAGTGCAACACATGACAACTCACACTGGTGACAAACCTTTTACTTGCGAGTTATGCGACTACACATGTGCATATTCTAGTCATTTAGTGCGACACATGAGAACTCACACGGGTGAAAAACCTTTTACTTGCGAGTTATGTGACTACAAATGTGCACAAAATAGTAGTTTAGTGCAACACATGAGAACTCACACGGGTGAAAAACCTTACGTTTGTAAGTTATGTGATCATAAATTTGCACTATCAAGTCATTTAGTGAGACACATGAGTACTCACACGGGTGAAAAACCTTTTACTTGCGAGTTATGTGACTACAAATGTGCACAAAATAGTCATTTAGTGCAACACATGAGAACTCACACGGGTGAAAAACCTTACGTTTGTAAGTTCTGTGATTATAAATTTGCAGGAACTAGTCATTTAGTGAGACACATGAGAACTCACACTGGTGAAAAACCTTACATTTGTAAGTTTTGTGATCATAAATTTGCACGAACTAGTCAGTTAGTGAGCCACATGAGAACTCACACGGGTGAAAAACCTTATGTTTGTAAGTTATGTGATTATAAATTTGCACAAACTAGTCATTTAGTGAGACACATGAGTACTCACACGGGTGAAAAACCTTTTACTTGCGAGTTATGCGACTATAAATGTGCACAAAATAGTAGTTTAGTGCGACACATGAGAACTCACACGGGTGAAAAACCTTTTGCTTGCGAGCTATGCGATTACAAATGTGCACTCCCTCTTCTGTCCGCGAGACTTGCGACGAATAACGGAAACAAAGTGCAAGCTGAAGACGCCGATACAGTCCAGAAGAGTAAACAACTATTTAAAATTTACAATATCGGATTAAACAACCAATTATTCAATACCAACAATATAACTGACATTAATAGATTGACTGATTGTGTGGTCATATTATATGATATTTTCAAAAAGCCCCAAGAAGGTGTACCAATACAAGGAGAACTCACACTGATACAAATCCTCCGTCATGTTCGTGAGCCGCACGCGGCACTCCGCCGCCGGCGCATGCTCAGGAGATACACTCTTGTTGAACTGTTTGCTGAAGCATTATCCTTATCCTAA
Protein Sequence
MRCCVPFCTNTPTNVSTSESKGISFHALPSDVCLRAAWLRALGKQDSQLPDSAVVCSQHFLDDEMYETESGLRQIATGAVPSTVQVCMICLNTDNKLYLMSKHKLEEAYERLTGYPLYDQGNLKQTLCVQCAQRLINFSRFRDKSLRARALMMDLVEKHELITRRHIKGINRTKNQLKSNFVMKTLGPDHCDLYILDSTDKQTESEPIGYSAVVKNEESFDSPVDEDMEVAEEDDNTADNVNDELDACKEECFSEDSIMLETKLLDDVICKALENPVFAEQVAEIPDLLKCESAAFQCTLCSEEFVSEHAYMQHMHMHDQQNSDGNADCSTSQVCKPHTAVSSSHSPCLTENKQAIPLSQASSLSAHSPSAHSPQTAVAPLSARLAPSNGNKVQAEDADTVQKSKPLFKINNVELNNQLFDTNNVTDINRLTDCVVILYDIFKKPEEGVPIQGESLATMRPSISSWDSQRHIEKASKDFNCQAVSRNEDTRHTIGDIQPVTNKLKVTELNVTKTSQSKSYCSNNYNSEDSLLTDKNGYICDVCRHKFKRKSVLVKHIKTHNEVKPFTFEFCQFKAIHKFSLKKHMQTHTGDKPFTCELCDYKCTQNSNLVRHMRTHTGEKPFTCEFCDYKCAQSSHLVRHMRTHTGEKPFTCELCDYKCAQNSCLVQHMTTHTGDKPFTCELCDYTCAYSSHLVRHMRTHTGEKPFTCELCDYKCAQNSSLVQHMRTHTGEKPYVCKLCDHKFALSSHLVRHMSTHTGEKPFTCELCDYKCAQNSHLVQHMRTHTGEKPYVCKFCDYKFAGTSHLVRHMRTHTGEKPYICKFCDHKFARTSQLVSHMRTHTGEKPYVCKLCDYKFAQTSHLVRHMSTHTGEKPFTCELCDYKCAQNSSLVRHMRTHTGEKPFACELCDYKCALPLLSARLATNNGNKVQAEDADTVQKSKQLFKIYNIGLNNQLFNTNNITDINRLTDCVVILYDIFKKPQEGVPIQGELTLIQILRHVREPHAALRRRRMLRRYTLVELFAEALSLS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00954811;
90% Identity
iTF_00954811;
80% Identity
iTF_00954613;