Basic Information

Insect: Maniola jurtina
Gene Symbol: -
Assembly: GCA_905333055.1
Location: HG995223.1:2402142-2409733[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.00038 0.017 15.9 4.2 1 23 136 158 136 158 0.96

2 14 1.6e-06 7.2e-05 23.4 3.1 2 23 164 185 163 185 0.97

3 14 0.019 0.88 10.5 1.8 1 23 219 241 219 242 0.95

4 14 4.4e-05 0.002 18.8 1.2 1 23 253 275 253 275 0.99

5 14 0.00024 0.011 16.5 2.5 1 23 297 319 297 319 0.99

6 14 4.2e-06 0.00019 22.0 1.9 1 23 331 353 331 353 0.98

7 14 9.3e-05 0.0043 17.8 4.7 1 23 359 381 359 381 0.98

8 14 2e-05 0.00092 19.9 3.7 1 23 387 409 387 409 0.99

9 14 3.1e-07 1.4e-05 25.6 1.7 1 23 415 437 415 437 0.95

10 14 7.7e-06 0.00036 21.2 3.5 1 23 443 465 443 465 0.98

11 14 4.1e-05 0.0019 18.9 1.8 1 23 471 493 471 493 0.98

12 14 2.5e-06 0.00012 22.7 4.3 1 23 499 521 499 521 0.97

13 14 5.1e-07 2.3e-05 24.9 2.1 1 23 527 549 527 549 0.99

14 14 0.0054 0.25 12.3 0.9 1 20 555 574 555 577 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.00038	0.017	15.9	4.2	1	23	136	158	136	158	0.96
2	14	1.6e-06	7.2e-05	23.4	3.1	2	23	164	185	163	185	0.97
3	14	0.019	0.88	10.5	1.8	1	23	219	241	219	242	0.95
4	14	4.4e-05	0.002	18.8	1.2	1	23	253	275	253	275	0.99
5	14	0.00024	0.011	16.5	2.5	1	23	297	319	297	319	0.99
6	14	4.2e-06	0.00019	22.0	1.9	1	23	331	353	331	353	0.98
7	14	9.3e-05	0.0043	17.8	4.7	1	23	359	381	359	381	0.98
8	14	2e-05	0.00092	19.9	3.7	1	23	387	409	387	409	0.99
9	14	3.1e-07	1.4e-05	25.6	1.7	1	23	415	437	415	437	0.95
10	14	7.7e-06	0.00036	21.2	3.5	1	23	443	465	443	465	0.98
11	14	4.1e-05	0.0019	18.9	1.8	1	23	471	493	471	493	0.98
12	14	2.5e-06	0.00012	22.7	4.3	1	23	499	521	499	521	0.97
13	14	5.1e-07	2.3e-05	24.9	2.1	1	23	527	549	527	549	0.99
14	14	0.0054	0.25	12.3	0.9	1	20	555	574	555	577	0.94

Sequence Information

Coding Sequence: ATGATTGACTTTGAAAGAACATGCCGGACATGTATGAAAACAAAAAGTGAAGCCGCTCTAACAAATTTATTTGGCCCGGTGAAAATCGAGCGTAATTGGTCATTAAAACTAGCAGATTTAGTTAAGGAAACTATTACATTGCAGATAACTGAAGGAGATGGCCTACCCCAAAATTTGTGTGATGAGTGTGTAACAAATCTCCAAAATATGTACACATTTCGCAGCCAAGCACTCAATTCTGAAAATGCGCTTAGAAAATTAGTTTCTCAAAGTGCCTCAATAAAAAATGAAACAGATTACAGTTTGAAGCATGAAAATGAGTTTGAATATCTTGAACATGCATATGACGATTTCATATTTGACAATCAGCCCCCAAAGGAAGAAGCTAACAACGATGTATCAATGTTTATTTGCAATATATGCAATAAAAAGTTCACCAAACGTAAGAAGTTTTTGAAACACTTATCAAATCACGAGGATCCACAAATTACTTGCCCAATTTGCGATAAACAATTTCATAGACAGTCAACACTAAAAAGACATTTAAATAAGCATTGTGAGACTAATAGTACATCTAACCTTAATAATAGTCTATTAGAGAATACGGTAACAGATTTGGGTGTAAAAGTTAAAGTAGAAAATATAAGCGATCAATATAAATGCTCTGAATGCAATCTTATGCTTGAGAACCAGAAATCTCTATTACTACATTCTAAAGAGCACCATAATATTGATTTAGATTTAGAAGAGCAAGTATACAGATGTGTAGAATGCTCAAAAAGTTATACAACGGAACAGAGATTGATGAAACACATGGCAACTCATTACGGAAACGGAAAAAGTAAATTAGACAGTGAAATGTTAGAAATAAAAATTGAGGGAGAGCATTACGAATGCCCAGAATGTCATGTTGTGTTTGAAAAACATAGGTCTTTAGCGTCACATTTGAAGAAGCACAAAATAAAAGTTGGTTTAAAAAGTCAGGGCACATATTATTGTGGGTATTGTGATAAACGATTTGCCTTAAAGACACTGCTTAGAAGACACATGAAGTTGCATACAGAGGACCGTCCGTTCAAATGTACTCAATGTTCTCAGTGTTATACTCGTCAAGACCAATTGGTTATGCATATGAGTAAACATGATGGTAAAAAGAGATATGTTTGCAATCTTTGTAATAAAGCATTTACTCAGCTGTGCAGTCTAAAAGACCACAAAAGAACTCACACGGGCGAAACTCCCTTCCTCTGCTCCCAGTGTGGGAAAGGCTTCAGTAACAACTCTAATCTGAGACAGCATTTGAAGCGCCACACGGGACTTAAGCCATTCAGCTGTAACCTATGCCCAAAGAGTTTTTGTACTAAAGGTCAGATGAAATCCCACATGGACACCCACACGGGCGTACACCCGTACAAATGCCATCAATGTGGTGCAGCCTTCACGAAAACAAACTCCTTGAAGAAACATGCTATGATACATCTTGGAGTCAAGCCATTTGCTTGTGATAACTGCAGTATGAGATTCTCATCAAAAGATCACTTGAAGCGCCACCAGCGCACTCACACGGGGGAGAAGCCGTACCGCTGCCCGCACTGCTCGCGAGCGTTCACGCAAAGCAACGACTTGGTCAAGCATGTTCGCACGCACCTGGGTCAAAACATCTATCAATGCACGGTGTGCCAAATGAAATTCCGCCTTATGAGGGAGCTAAAACGCCACTACCCTATACACTACATCAATGGGGCCGATCCCACCCCTGCGCAGGAAATCGAATCACCCCTTGTCATACTCAAGGGGTGCTCCGACCAAGATAATATAGAGGCTAACAACATACCGTCAGACAGACAAATAACAATCACGTTTAATAGTAACGTTCTAGATAAAAACAGTATCGGTGACATAACTATTAATATAGAACCTGGGAAGATAACTAATTAA
Protein Sequence: MIDFERTCRTCMKTKSEAALTNLFGPVKIERNWSLKLADLVKETITLQITEGDGLPQNLCDECVTNLQNMYTFRSQALNSENALRKLVSQSASIKNETDYSLKHENEFEYLEHAYDDFIFDNQPPKEEANNDVSMFICNICNKKFTKRKKFLKHLSNHEDPQITCPICDKQFHRQSTLKRHLNKHCETNSTSNLNNSLLENTVTDLGVKVKVENISDQYKCSECNLMLENQKSLLLHSKEHHNIDLDLEEQVYRCVECSKSYTTEQRLMKHMATHYGNGKSKLDSEMLEIKIEGEHYECPECHVVFEKHRSLASHLKKHKIKVGLKSQGTYYCGYCDKRFALKTLLRRHMKLHTEDRPFKCTQCSQCYTRQDQLVMHMSKHDGKKRYVCNLCNKAFTQLCSLKDHKRTHTGETPFLCSQCGKGFSNNSNLRQHLKRHTGLKPFSCNLCPKSFCTKGQMKSHMDTHTGVHPYKCHQCGAAFTKTNSLKKHAMIHLGVKPFACDNCSMRFSSKDHLKRHQRTHTGEKPYRCPHCSRAFTQSNDLVKHVRTHLGQNIYQCTVCQMKFRLMRELKRHYPIHYINGADPTPAQEIESPLVILKGCSDQDNIEANNIPSDRQITITFNSNVLDKNSIGDITINIEPGKITN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00953734;
90% Identity: iTF_00953734;
80% Identity: -