Mjur006721.1
Basic Information
- Insect
- Maniola jurtina
- Gene Symbol
- -
- Assembly
- GCA_905333055.1
- Location
- HG995233.1:2194181-2199816[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 27 0.09 4.1 8.4 2.4 1 21 75 95 75 96 0.96 2 27 0.3 14 6.8 1.5 2 23 168 189 167 189 0.93 3 27 0.028 1.3 10.0 0.1 1 23 193 215 193 215 0.95 4 27 0.66 30 5.7 1.3 1 17 220 236 220 243 0.77 5 27 0.054 2.5 9.1 0.1 1 23 249 272 249 272 0.94 6 27 0.0081 0.37 11.7 1.9 1 23 279 302 279 302 0.97 7 27 0.00024 0.011 16.5 0.9 1 23 309 331 309 331 0.96 8 27 3.2e-06 0.00015 22.4 4.0 1 23 337 359 337 359 0.98 9 27 0.00043 0.02 15.7 0.4 2 23 363 385 362 385 0.96 10 27 8.4e-05 0.0039 17.9 0.4 1 23 463 486 463 486 0.97 11 27 2.6 1.2e+02 3.8 0.1 2 23 513 535 512 535 0.92 12 27 0.044 2.1 9.4 0.8 1 23 557 579 557 579 0.97 13 27 0.00023 0.011 16.6 0.5 1 23 583 605 583 605 0.97 14 27 8.2 3.8e+02 2.2 0.3 1 15 610 624 610 633 0.74 15 27 0.0047 0.22 12.4 0.1 1 23 639 662 639 662 0.90 16 27 0.0047 0.22 12.4 0.7 1 23 669 692 669 692 0.97 17 27 0.044 2 9.4 0.3 1 23 745 767 745 767 0.98 18 27 3.4 1.6e+02 3.4 0.6 1 13 771 783 771 784 0.87 19 27 0.0079 0.37 11.7 3.3 1 23 819 841 819 841 0.96 20 27 0.012 0.54 11.2 2.2 3 23 911 931 909 931 0.96 21 27 0.00025 0.011 16.5 2.3 3 23 937 957 936 957 0.98 22 27 0.0015 0.071 14.0 0.8 1 23 964 987 964 987 0.98 23 27 0.00018 0.0081 16.9 2.9 1 23 993 1016 993 1016 0.96 24 27 0.0021 0.095 13.6 0.3 1 23 1022 1045 1022 1045 0.97 25 27 0.00012 0.0057 17.4 0.5 1 23 1051 1073 1051 1073 0.98 26 27 1.8e-06 8.2e-05 23.2 1.7 1 23 1079 1101 1079 1101 0.99 27 27 0.0006 0.028 15.3 5.2 1 23 1107 1129 1107 1130 0.96
Sequence Information
- Coding Sequence
- ATGTTAGTAATGTTAGTACTAAGAGAACGCGCACAAACAGAAAACGAGAACTCTATAAAAATTGAGACAACAGAAAATTCGCATTTAGGTGAAACGTTAAAAATTGAGAAACGCCGGTATCAGAGAAGCGCCAGGGCCGAAGCGAGGTTCCTAACCAAGAAGAATGCTAGTGCCTTGCTCGAATGTTGGTCCCTGTGTCCCTTTAGATGGAAACGGAATAGATTCAAATGCGCATACTGTGAAGACCATTTCACTGATTGCACAGAACTCAGGACACACGTAAGGCTGTGCTCGACACAGCACAACATCAAGGACATTTACAGCAAATTCAAGGAAATGACACTAATCAATGTTGATATCACCGAAGCGTCATGCAGAATTTGCGCTTTGCCATTCCGGGAGGTGAATGAAATGCGTCACCACGCTATCCAACATGGCTATGACTTCGACACTTCCCAACCAGACGGTGTCCTACCCTTCTGTTTGGACAAAGAATCCTGGAGATGCATTATATGCCATGAGATGTTCAATAACTTCCTGAAACTCTACGAACACATGAATTCACACTACCAACATTACATTTGCGCGACGTGCGGTAAAGGCTACATGACAGCTCCTCGGTTGAGGAAGCATTCAGAAGTACATATTACAGGGACGTTCCCATGCGATAAATGTAAACGGGTCTTCACGATGCGCGCGGCAAGGGATTACCATAAAAGCCACGCCCATGCTAAAGGTCCTCGATACGAGTGCCCGCAATGCGACATGAGATTCGGAGGGTATTACGAAAGAATGAATCATCTAAACGAAGCACACAGAGAAAAGGAAGTGGCTTATAAGTGTGCCCATTGCGAGCTATCTTTCAAAACCAGCGGAAAACGCGCTACACACGTCAAATCTATCCACTTTCCGCAACAAAGGAACTTCGCCTGTCCTTTTTGCAAATGGTTTTTCAAAACTGGCTATGAATTAAAAAGGCATATCGTCAAACACACGGGCGAGAGAAATTTTTGTTGCACGCTTTGCGGGAAGACTTTTCCAAGAAATAGAGCGTTGAGGAAGCATTTGAAAACGCATGAGGATCTGAATTGTAAATGGTGCGGGGTTATGTTTAACCAGAAGGCGTTGTTGATGGACCACTTCCGAACTAACCATCCAGAAATAAGTTCCGCAAATGCGGATTCGGGAGATGTGTGTGTAGAAGTTAAACGTGTTAGGAAGTTAAAGGAGAATGTGTGCGCCAGGCAAATGCGTCGGAGACGGCGAGCCAACAACGAGCTACCCGAAGAATCAGATAAACGCATAGCTAAAACCATGATGCGCAAAAACGCCATGACCATTCTAGAGAGTTCCACAGCATGGGCCTTCCGCTGGTTTCAAAGCGCATTTTACTGCTCATATTGCGATTTGAAATTCGTAGAGCCCTCACTCTTACGCGATCATGTACGTTCTCTTCATTTAAACGATGCCCCAACAAAAAGAATCTTCTCGAAACTAACAGAAAACAACATGGTTAAAGTAGATGTTACGAACTTACAATGTAGATTGTGCAATCTTGCAATCGACAGCATTGATACTTTGAAAACTCATTTGGTATCAGTGCACGAGAAACCGTTCCATACTGATTTTAGTGATGGCGTTCTCCCTTTCAAACTTGAAGCAGATAGATTTAACTGTCAGAAATGTCCGCTATACTTCACAAGCTTCGCTAAAATCAATGAACATATAAACAGTCATTACCAAAACTATATTTGTGATGCGTGTGGCAAAGCTTTCGTGTCTAAATCCCGTTTTAGGACACACGTTCAGTCGCACGAAGTTGGTACCTTTCCTTGCGGTGATTGTGATGAAGTTCTAGAGACTAGGGCAGCTAGAATGTGTCACAGACTGAGAGTTCACAAGAAAGGTGTCCGATACACTTGTCCTAGATGTCCTGAAGTCTTCACGACTTATTACGCGAGAGCAAAACACTTAGTCGAAGGACATGATCAACAGAAAAGGCATTACGAATGTTCCGCTTGTGGAAAAATATTCGAAACTAGCTGCAAGCGTGCAGCACACATACGCATCACCCACAAAGCCATAGAGAAGAGATATGAATGTCCACATTGCTCGTGTGATGTTGATAATAATATAGACGGTCTAAAGGTGCATCTACATGAAGAACATAAAATTCAATTCAATGCAGAGGCCGGCGATGGGGTCACACCTTTTGTCTTAACCAGATCTGAGTATAAATGTGTTATTTGCGACGTACAGGTTGAAGCGTGTTGGAATTTGTTTACCCACATGAATGTGCATTACCAAAGTTTCGTATGCCAAACGTGTGGGAAAGGGACGGTCAACAAATATATATGGAAACGGCGACGCAGGGTTTATATCGACCATAGGCATAACGCTGCTATAATTATAGAGCACTCAAACGCGTGCCCGTTTAGATGGAAACGTGGAACATTCGCCTGTTCCCATTGTCCGAGAACGTTCGGGCATTTTGAAGAGCTTTACAATCATACCCAAGAACACCCTGACCGGTTAAAAGCTATGCATTACGCTCGGCCTTACGACACGGTCAAAGTGGAAGTTACTGATCTAACATGTACCATTTGTCATGACAAAATGAGCGATATAAATCATCTTAGAGACCATTTATTCAATATTCACAAACAGCCCATAACCAAAGAGTTGGATATTGGTGTAACCCCATTTATTTTACGGAACAACGAGATGATTTGCGCACATTGCTCGCAACGCTTCTCTCTATTTTCCAAACTTAACAGCCATATGAACGAACATTACCCTAATAACATTTGCTCCCACTGTGGTAAAGCGTTCACTGCCGCCCACAGGTTGAAAGCCCATCAGCTTACCCACGAATCAAGTGACCAAAGTTATAAATGTGGTAAATGCGACGAAGTTTTCGAGACTAGGCCCTTAAGGAATTATCACATGAACATGAAACACGGTCCGGCAAATCGTTACAGATGCCCATATTGTAACTTGTCGTTCAAACGCTATTCGGACAGGTCACGGCATCTGAAAGAATTTCATAACCAAAACGTGGAGTATCCTTGCCATTTGTGTCCAGCAGTTTTCGCCTTATCCGACCAAAGGACGAAGCACATAAGGAACGTACATATAAAGCATAAGCAGTTTCAGTGCGACCGTTGTCCGAGCAAGTTTGTGACGGCAGGCCAATTAAAGAGTCATATGATCAAACATTCTGGTTTAAGGGAGTTCCAGTGTAGTGTATGCAAGAAGAGCTATGCAAGGTCTCGTACGCTGAAGGAGCATATGAGAATACATAATAACGACAGGAGATTTGTGTGTGAATATTGTAATAATGCTTTCATCCAAAAGTGCAGCCTGAAGAGTCATTTGAAAACTCACCACCCTAATGCGGAGCTCTCCAAGATTTCGATTGATTAA
- Protein Sequence
- MLVMLVLRERAQTENENSIKIETTENSHLGETLKIEKRRYQRSARAEARFLTKKNASALLECWSLCPFRWKRNRFKCAYCEDHFTDCTELRTHVRLCSTQHNIKDIYSKFKEMTLINVDITEASCRICALPFREVNEMRHHAIQHGYDFDTSQPDGVLPFCLDKESWRCIICHEMFNNFLKLYEHMNSHYQHYICATCGKGYMTAPRLRKHSEVHITGTFPCDKCKRVFTMRAARDYHKSHAHAKGPRYECPQCDMRFGGYYERMNHLNEAHREKEVAYKCAHCELSFKTSGKRATHVKSIHFPQQRNFACPFCKWFFKTGYELKRHIVKHTGERNFCCTLCGKTFPRNRALRKHLKTHEDLNCKWCGVMFNQKALLMDHFRTNHPEISSANADSGDVCVEVKRVRKLKENVCARQMRRRRRANNELPEESDKRIAKTMMRKNAMTILESSTAWAFRWFQSAFYCSYCDLKFVEPSLLRDHVRSLHLNDAPTKRIFSKLTENNMVKVDVTNLQCRLCNLAIDSIDTLKTHLVSVHEKPFHTDFSDGVLPFKLEADRFNCQKCPLYFTSFAKINEHINSHYQNYICDACGKAFVSKSRFRTHVQSHEVGTFPCGDCDEVLETRAARMCHRLRVHKKGVRYTCPRCPEVFTTYYARAKHLVEGHDQQKRHYECSACGKIFETSCKRAAHIRITHKAIEKRYECPHCSCDVDNNIDGLKVHLHEEHKIQFNAEAGDGVTPFVLTRSEYKCVICDVQVEACWNLFTHMNVHYQSFVCQTCGKGTVNKYIWKRRRRVYIDHRHNAAIIIEHSNACPFRWKRGTFACSHCPRTFGHFEELYNHTQEHPDRLKAMHYARPYDTVKVEVTDLTCTICHDKMSDINHLRDHLFNIHKQPITKELDIGVTPFILRNNEMICAHCSQRFSLFSKLNSHMNEHYPNNICSHCGKAFTAAHRLKAHQLTHESSDQSYKCGKCDEVFETRPLRNYHMNMKHGPANRYRCPYCNLSFKRYSDRSRHLKEFHNQNVEYPCHLCPAVFALSDQRTKHIRNVHIKHKQFQCDRCPSKFVTAGQLKSHMIKHSGLREFQCSVCKKSYARSRTLKEHMRIHNNDRRFVCEYCNNAFIQKCSLKSHLKTHHPNAELSKISID
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01092290;
- 90% Identity
- -
- 80% Identity
- -