Mjur002852.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Maniola jurtina
Gene Symbol
-
Assembly
GCA_905333055.1
Location
HG995221.1:9971839-9993011[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 16 0.00011 0.0049 17.6 1.5 1 23 358 380 358 380 0.96
2 16 0.0084 0.39 11.6 0.6 1 20 386 405 386 408 0.94
3 16 2.7e-05 0.0012 19.5 5.4 1 23 427 449 427 449 0.98
4 16 2e-05 0.00092 19.9 5.6 1 23 455 477 455 477 0.99
5 16 4.3e-05 0.002 18.8 5.3 1 23 483 505 483 505 0.97
6 16 0.00012 0.0058 17.4 6.7 1 23 511 533 511 533 0.97
7 16 0.00012 0.0057 17.4 6.5 1 23 539 561 539 561 0.97
8 16 6e-07 2.8e-05 24.7 1.9 1 23 567 589 567 589 0.98
9 16 1.2e-05 0.00055 20.6 7.7 1 23 595 617 595 617 0.98
10 16 4.3e-06 0.0002 22.0 7.6 1 23 623 645 623 645 0.98
11 16 0.00014 0.0064 17.3 7.3 1 23 651 673 651 673 0.97
12 16 5.7e-06 0.00026 21.6 5.9 1 23 679 701 679 701 0.98
13 16 6.9e-05 0.0032 18.2 7.8 1 23 707 729 707 729 0.97
14 16 4.5e-05 0.0021 18.8 7.4 1 23 735 757 735 757 0.96
15 16 0.00089 0.041 14.7 0.3 1 23 764 786 764 786 0.96
16 16 0.041 1.9 9.5 4.3 1 23 794 816 794 816 0.99

Sequence Information

Coding Sequence
ATGAATCCGGATCACCACAGTATGAATACGGGTGGTGGCCAGCCTCCAAGCAATTCGGAGTCTCAGAATGCGAGGGTGCAGTCTGCACAGCAACAACAACAAGCTAACTTGACTCCTACAACATCTGCTACTGACTTGCGAGTCAACTCTGCAGCTGTGAACGTTGCTTTGTCGAGCGTAGCCAAGTATTGGGTGTTTACAAACCTCTTTCCCGGTCCATTGCCGCAGGTTTCCGTTTACGGTTTGCCCAGTACAAGGATTGAAAATGGGAAACCAGTTCAGGACATTGGTCAGGCGCATGCTAGTATATTGAATGGAGACCCCAACATTATACTGGGGCACACAGGACAGCCGCAGGTCACAGTGTCTGCAGCTGGCCAACAGATTCCTGTGTCACAGATCATTGCTACACAGGCTACACAAGGACATGATGCTATGGTGGGCCACAGCCAACAGCAGGAGGCGTCAGCCAGCGCCCAACTTGTAGCAAGCCAATCTTCCCAGCAGGTACCCAATAATCGGGTCGACTTTGTACAACACCATAACATTGATATGGGACATCATTCCCAGCAACACATTATGCAGCAACAGCTGATGGCGGCAGCTCGGCCAGAACACGCTAACCAACAGATCCAACTGACGGTGAGCGAGGATGGCATAGTGACGGTGGTGGAGCCGGGCGGCGGGAAACTGGTCGACAAGGAAGAACTGCACGAGGCGATAAAGATGCCCTCAGACCACACTCTCACTGTTCATCAGTTGCAACAGATTGTTGGACATCATCAGGTCATAGACAGTGTAGTCCGCATCGAGCAAGCCACAGGCGAGCCGGCCAATATCCTGGTGACGCAGAACCCAGACGGCACCACGTCCATAGAGACCAGCGCAGTTGACCCCCTACTCGTCAAAGACGAGAAGAGCGCCTCCAAAATAGAGTCGGCCCAGTTTGCTATACCCGCTGATATTAAGGACATCAAGGGAATTGATTTAAAGGTGATAAACGACGTGGTGGAAGTGGAGGTGCCGGGTCCAAGCGCAGCGATGTCGGAGGCTGAGTCCTCCCCCGGACACCACGCGTGCGACATCTGTGGGAAGATATTCCAGTTCCGATACCAACTTATTGTTCACAGACGATATCACGGCGAGAACAAGCCATACACATGTCAAGTCTGCGGATCTGCTTTTGCCAATGCGGTTGAACTATCGAAACACGGCAAATGCCACCTCGCGGGTGACCCGGCCGAACGTCAGGCGAAGAGACTGGCTCAAGACAAACCATACGCCTGTTCCACGTGTCACAAGACGTTCTCACGCAAGGAACATCTTGATAACCACGTTCGCAGTCACACTGGAGAAACTCCTTACAGGTGCCAGTACTGTTCAAAGACGTTCACCCGAAAGGAGCACATGGTGAACCACGTGCGCAAGCACACGGGCGAGACGCCGCACCGCTGCGAGATCTGCAAGAAGAGCTTCACGCGCAAAGAGCACTTCATGAACCACGTCATGTGGCACACGGGTGAAACCCCACACCGCTGCGACTTCTGTTCGAAGACCTTCACTCGCAAGGAACATTTACTCAACCACGTGCGTCAACACACTGGAGAATCGCCGCATCGATGCAACTTCTGTTCGAAGTCCTTCACGCGCCGCGAACATCTTGTGAATCATGTACGGCAGCACACTGGGGAGACGCCGTTCCAGTGTGGATACTGCCCTAAAGCATTCACCAGGAAGGATCATCTTGTAAACCACGTCCGTCAACACACCGGGGAGTCCCCTCACAAGTGTTCATACTGCACGAAGTCGTTCACGAGAAAGGAGCATCTGACCAATCACGTGCGTCAACACACAGGGGAATCCCCGCACCGGTGTACATACTGCTCCAAATCGTTCACAAGGAAGGAACATCTCACTAATCATATTAGGCAACACACTGGGGAGACGCCATTCAAATGCACGTTCTGTTCAAAGTCCTTCTCAAGAAAGGAACACCTCACTAACCACGTCCACCTCCACACGGGGGAAACTCCACACAAATGCCCCTTCTGCACCAAGACATTCTCCAGAAGGGAGCATTTGACCAATCATGTTCGGATACACACAGGCGAATCGCCGCATCGGTGCGAGTTTTGCCAAAAGACCTTCACTCGCAAAGAGCACCTCACGAATCACTTGAAACAACATACAGGTGACACACCGCACGCGTGTAAAGTGTGCTCCAAGCATTTCACGAGGAAGGAGCATCTCGTTCAACATATGAGGTCCCACAGTTGCGGCGAACGTCCATTCAGTTGCGGCGAATGCGGAAAATCGTTCCCCTTGAAAGGCAACCTGCTGTTCCACGAGCGGTCGCACAAGAGCGGCAACACGAAACAGTTCCGCTGCGAAATCTGCGCTAAGGAGTTCATGTGCAAAGGTCACTTGGTGTCCCACCGGCGAACGCACACGGAAACGGGCGCGCCTGTGTCCCATGCGGAACCGGTGCCCGAAAATGAGGATTGCGGTGACTACGCCAAGTGCGAGAAAGACAACACCGACATTCCCGAGAGGAAACATGATATCAGGGCAACAACAGCCATTGACACCACTGGAACACAAACACAGCTGAGTACTGTAATGCAAATAACAACCCAGCAACCAGTGCGAGCGGGCGCGGTGACGAGCGCAGCGAGCGTCGCGTCCGGCACATTCACGCACACGGCCAGCGCACAGCATCACGCGGGCGCCACCATCGCGCACCATCCCGTCACTGTGAACTACTAG
Protein Sequence
MNPDHHSMNTGGGQPPSNSESQNARVQSAQQQQQANLTPTTSATDLRVNSAAVNVALSSVAKYWVFTNLFPGPLPQVSVYGLPSTRIENGKPVQDIGQAHASILNGDPNIILGHTGQPQVTVSAAGQQIPVSQIIATQATQGHDAMVGHSQQQEASASAQLVASQSSQQVPNNRVDFVQHHNIDMGHHSQQHIMQQQLMAAARPEHANQQIQLTVSEDGIVTVVEPGGGKLVDKEELHEAIKMPSDHTLTVHQLQQIVGHHQVIDSVVRIEQATGEPANILVTQNPDGTTSIETSAVDPLLVKDEKSASKIESAQFAIPADIKDIKGIDLKVINDVVEVEVPGPSAAMSEAESSPGHHACDICGKIFQFRYQLIVHRRYHGENKPYTCQVCGSAFANAVELSKHGKCHLAGDPAERQAKRLAQDKPYACSTCHKTFSRKEHLDNHVRSHTGETPYRCQYCSKTFTRKEHMVNHVRKHTGETPHRCEICKKSFTRKEHFMNHVMWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCNFCSKSFTRREHLVNHVRQHTGETPFQCGYCPKAFTRKDHLVNHVRQHTGESPHKCSYCTKSFTRKEHLTNHVRQHTGESPHRCTYCSKSFTRKEHLTNHIRQHTGETPFKCTFCSKSFSRKEHLTNHVHLHTGETPHKCPFCTKTFSRREHLTNHVRIHTGESPHRCEFCQKTFTRKEHLTNHLKQHTGDTPHACKVCSKHFTRKEHLVQHMRSHSCGERPFSCGECGKSFPLKGNLLFHERSHKSGNTKQFRCEICAKEFMCKGHLVSHRRTHTETGAPVSHAEPVPENEDCGDYAKCEKDNTDIPERKHDIRATTAIDTTGTQTQLSTVMQITTQQPVRAGAVTSAASVASGTFTHTASAQHHAGATIAHHPVTVNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00953726;
90% Identity
-
80% Identity
-