Mjur008850.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Maniola jurtina
Gene Symbol
sip1
Assembly
GCA_905333055.1
Location
HG995229.1:12099082-12106649[+]

Transcription Factor Domain

TF Family
GCFC
Domain
GCFC domain
PFAM
PF07842
TF Group
Unclassified Structure
Description
This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.5e-58 1.7e-54 185.7 2.2 1 275 382 639 382 639 0.97
2 2 0.57 6.7e+03 -3.2 0.0 248 273 657 682 642 684 0.67

Sequence Information

Coding Sequence
ATGGAGCACGAATGGCAATCTGCAGTCAAAACCAGAGTTAAATGTGATGTAACCATGTCCGACGACGAGGTTATCCGCTTCGAGATCACCGACCACGACCTGGACAATGAGTTCAACCCCAACAGGAACCGACGCGCCAAGAAGGAGCACCAAATATACGGTGTGTGGGCAAAGGACAGCGATGACGAAGACAATGAAGACAACATCCGGCGCAGGACGCGCAAGCCCAAGGACTTCTCAGCGCCCATCGGCTTTGTGGCGGGCGGCGTGCAGCAGGCCGGCAAGAACAAGGAGGACAAACAAGAAGTGGAAAAGTCAGACGCGTCCTCATCAAAGGCGAAGTTCGTGGACAGTTCAGACGAAGAAGTGTCGGCTCCCGACGAGAGCGAGACGGCGGGCATTCGACGCGCGGGGCAGGGCATGCGCAGCGCGCCGCTCGGGGGCAGCGTGGGCACGTGGGAGAGACACACTAAGGGCATCGGCGCCAAGCTGCTGCTGCAGATGGGCTACCAGCCGGGCAAAGGTCTGGGCAAGGACCTGCAGGGCATCTCGGCGCCGGTGGAGGCCACCGTGCGGAAGGGCAGAGGGGCCATCGGGGCTTATGGGCCCGAGAAAGCTGCCCAAAAAGCCAAGCAGGAGGAGGAGCGTCGCCTGAAGGAGAAGGAAGAAGAGGAGAAAGGCACCAAAGAAAAAACGTATAACTGGAAAAAGTCACACAAGGGCCGCTACTTCTACAAGGACGCGGCGGACGTCATACAGGAGGGCAAGCCCACCATGCACACTGTCACCAGTGCGGCAGCATGCAGCACGCCCGTGATCGACATGACGGGGCGCGCGCGGCGCGTGCTGAGCGGCTACCACGCGCTGCGCGCCGCGGCGCCGCGCTACGAGCACGAGCCGCGCCGCGCCTGCACGCGCTTCGCCGCGCCCGCGCTCGCGCACAACCTGCACCTAGCCGTGGACTGCTGCGAGCGGGACATCATCCAGAACGCGCGCGAGCTGCAGCAGGCCGAGGACGAGATCGTGGTGCTGGAGCGCGACCTGGAGGAGTGCAACCTCAAGCTGCGCGGCGAGGACGAGGTGATCGGCAAGGTGCAGGCCATCCTGGCGCGCGTGCAGGAGCTCACGCGCCCCGACGTGTCGCTGGAGACCGTGCACGAGGTGCTCGCCGAACTGAAGGAGACGTTCCCGCTGGAGTACGGCATGTTCGGGCTGGGCACCGTCGGCGGCAGCATCGTCAGCCCGCTGCTCAGCGCGCTCACGGCGGGCTGGAACCCGCTGACGGCGCCCGCGCTGCCCGCGCCCGCCTTCCGCAAGTGGCGCGCGCTGCTGGACGAGGAGGCATACAACGCGCTGCTGTGGCAGCACTTCGTGCCGCGCTTCGCCGCGGCGGCTGAGGAGTGGAACCCGCGCGCGCCGGAGCTCATGCTGGGCGTGGTGGAGGCGTGGCGCGACGCGTGCCCCGAGTGGGTGGCGCGCGCGGCCGTGGCGCGCCACGTGGTGCCGCGCGTGCTGGCCGGCGTCAAGGCGTGGGACCCCACGCGCGACCCGCAGCCGCTGCACGCCTGGGTGCTGCCCTGGCACCCGCTGGCCGGGGAGACGCTGTCGCGCGAGGTGTACCCGCTCATCCGCGCGCGGCTGGCGGCGGCGCTGGCGGCGTGGCACCCCGCCGACCAGAGCGCCAAGCCGCTGCTGGCGGCGTGGCGCGGCGCCTGGGGGCCCGCGCTCACGCCGCTGCTGCACCACCACGTGGCGCCCAAGCTGGAGCACTGCCTGCACGCCGCGCCCATCGAGCTGCTGCACGCCAAGCAGAACTCGGCGTGGCTGTGGTGCGTGGAGTGGGTGGAGCTGGTGGGCGCGCCCACCATCGCCGCCATCGCGGCGCGCGCGCTGCTGCCGCGCTGGCTCAGCGCGCTGGCGGCGTGGCTCAACACGGCGCCGCCGCACGCCTCCGTGCTGGCCTCCTACACCGACTTCAAGAAAATGTTCCCCGAAGAGATCCTCAAGGAGGCCGCGGTGCGCGACATGTTCCGCAAGGCGCTGGACATGCTCAACCGCAGCTCCGACCTGCAGTGCGCGGAGCCGCCGCCCGCGCCGCGCCTCGCCGCCGCGCCCGCGCCCTCCGCCGCCGCCGACCTCGTGCCGGCGTCGCAGCACAAGAGCTTCTCGGAGCTGCTGGAGGCGCGCTGCGCCGAGCGCGGCATCACGTTCGTGCCGGTGCCGGGCAAGGCGCGCGAGGGCCGGCCGCTGTACGCCGTGGGCGCGCTGCAGTGCTACGTCATCCGCAACGTCATCATGTACTCCGAGGACGGCGGCCGCAGCTTCGCGCCCGTGCCCATGGAGAGGCTGCTCGCTCTGGTGGCGGAGTGA
Protein Sequence
MEHEWQSAVKTRVKCDVTMSDDEVIRFEITDHDLDNEFNPNRNRRAKKEHQIYGVWAKDSDDEDNEDNIRRRTRKPKDFSAPIGFVAGGVQQAGKNKEDKQEVEKSDASSSKAKFVDSSDEEVSAPDESETAGIRRAGQGMRSAPLGGSVGTWERHTKGIGAKLLLQMGYQPGKGLGKDLQGISAPVEATVRKGRGAIGAYGPEKAAQKAKQEEERRLKEKEEEEKGTKEKTYNWKKSHKGRYFYKDAADVIQEGKPTMHTVTSAAACSTPVIDMTGRARRVLSGYHALRAAAPRYEHEPRRACTRFAAPALAHNLHLAVDCCERDIIQNARELQQAEDEIVVLERDLEECNLKLRGEDEVIGKVQAILARVQELTRPDVSLETVHEVLAELKETFPLEYGMFGLGTVGGSIVSPLLSALTAGWNPLTAPALPAPAFRKWRALLDEEAYNALLWQHFVPRFAAAAEEWNPRAPELMLGVVEAWRDACPEWVARAAVARHVVPRVLAGVKAWDPTRDPQPLHAWVLPWHPLAGETLSREVYPLIRARLAAALAAWHPADQSAKPLLAAWRGAWGPALTPLLHHHVAPKLEHCLHAAPIELLHAKQNSAWLWCVEWVELVGAPTIAAIAARALLPRWLSALAAWLNTAPPHASVLASYTDFKKMFPEEILKEAAVRDMFRKALDMLNRSSDLQCAEPPPAPRLAAAPAPSAAADLVPASQHKSFSELLEARCAERGITFVPVPGKAREGRPLYAVGALQCYVIRNVIMYSEDGGRSFAPVPMERLLALVAE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00801863; iTF_00354099; iTF_00353087; iTF_00953525;
90% Identity
iTF_00953525;
80% Identity
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