Basic Information

Gene Symbol
-
Assembly
GCA_905333055.1
Location
HG995231.1:1433873-1436638[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 5 0.16 1.7e+02 2.8 0.0 22 36 231 246 228 247 0.80
2 5 1.7e-05 0.018 15.5 0.0 22 45 284 308 276 309 0.89
3 5 1.5e-08 1.5e-05 25.3 0.3 1 45 315 363 315 364 0.94
4 5 7.2e-10 7.3e-07 29.6 0.0 1 41 368 408 368 411 0.97
5 5 2e-08 2e-05 24.9 0.0 3 44 420 463 418 464 0.94

Sequence Information

Coding Sequence
ATGAGTGATGAAAACAGTGAGTTTAGTAGCGAAGAAAGCGAAGATTTAGAAAATAGCACTGCAATAACAGAAATAGATATTGAGGAACACAAACCCGGCACGAGTGCTTTCGTATCTCATGAAGCCTCTACACCTGTGGCGACTTCGAGTCACGGGGAGAACGCCAAACTATCCAAAATCGAAACCGCCTTAATATGTAATAGAATATTGGATGTAAAATTGCGAAAACTTGAAGAATTACTGCAAACTCGATTACTCGAATGCCGCCGGAGACTAACTGAAGTTCAAGGTGGCCAAGTCCCCGAGGCGAACGCGTCGGAGCCGCGAAAACGAAAATTTACCTATGCCATCTTTGGGAAGCCATACTTTAAAGACAGGCGAGGATTTCCCGCCCCCGACAACGAGGACACCATATTGATGAATAAATCTGAGATGTTCAACTTCTCGAACACATGCTCTGCTCCTGGATGGACTGTGAAGGACAAGTGCGAAGTTTCCAAGCTCATACACAAGATGTCGAAAGAAATTAAGAAGGAACAATTAAGTTCACAAATTCTATCCTTACAACGTGAAAATAAAAGATTGAAATCAACAAAAAATAATAGAAAAATATCCATCCTCAAAAAAGAGCTCGTTGGTGTTAATAGAGAGTCTCTCCAAACATTAGCTCTTCCGATAGATGAGGAGTACGACTGGCATCACATCGCTAACCAGATGAACAGCAGGCACACCGCTAATGAATATAGAGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAAAAAATTGCCTCCGAAAAGGAGTTGCAAGACTGGGATGCTATAGCTCAGGAGCTGGGCACCGGCAGAACCAGCTACCAGTGCTTTGTTTACTTCCGCACTAACATGAACAACAACTTTACAAAACGGACTTGGACAAAAGAGGAGGAAAATCACCTCTTGCTGTTAATCCAATATCATAGGGAGGGCAACTATATTCCTTGGGGCAAAGTTGCAGCCTCAATGGAAAATAGGACTAACATACAGGTTTATAACAAGTACGCTCGCCTCTTAGAATCCAGAAAAGGCAAATTTCTTCCTGAGGAAGATTCTGTTATACTAACGTGTGTCAATAAATTTGGGCCAAAGTACAGAAAGATAACTGAATATCTCCAGGGTCGTTCCATAACTCAGGTCCGGGAAAGACACCACCTCTTAACCAAAAGACAATATTCAACAGTTTGGACAATTGAGGAAGATAGGAGATTAGTTCGGTTGCTAGCCAACCAAGATGGATCTACTAATTTTTCAAATGTGTCACAATATTTTCCAGGAAAAGATAGAGTACACGTTAGAACTAGATACACAACATTATGTAGATGGATGAGAAGAAATCCTAATGTGGACCTCAAGCATGCACCGAGGCGTGGCCCAAGGCGTCTAGAACAGGGAAGGTCTACTGATGATCTCAATAAAGCTATAGAGAATTTAAAAAAACGTGTAGAAGAAGATGCTTTAGAAGGCAGAAAGGAAGCTAAGGACATAATTATTAAGAAGAAATCACAAATAAGTAAAGACTCACCAGAAGATGATATCGATGAAGCAATAGTAGCCCTTATCACTAAGGAGGAGGCGAGAAAAATAGACGCACGAAATTTACAAGCATCCCAAGAGGGACAAGAAAAAGATTCTGTAATTGATGAAGAGAACAAGAGTTGTAATATTACAGTTCTTCGAAATATACTGATTTTATTGAAAGCAAAATTGAATAAGCAAAAGTTTAAAGATAGTCCGTTATGTAATACATACAAAGGCCTACTAGATTGCAAACCTGGGCAGAACACAGTTAGAATCAGCACATATTCTAGAAAAGATTCATTCAAAAAGACTGTAATGGCAGAAAAAGTAGACATTTGGGGAAATACCTTAAAAAAGCCATTGTCATGTGTGCTTCCACCACATTACGCAACAATTACTGGTTGCAAACAATTGATGAAACATTTTGTCAGCCCTGAAGCAGAAATGAAAGATTCCAAACATATGAATTTCTTTATCAAAAATGTTAAGGTTAAGGAGGAAATTGATCTTCTCATGGAACGCTTTAATTCCTTATTCCTCTGGCCGATGCTTCTATCGAGTGTATCGCCAGAAGATTGTAAAATGACAAATGCAGAATTAACATCAAAAACTGTCACAAAATATGTTGATTGTAAAAAAGAAGACTACGGTCTTGCATTGCCACGACCTAGATACAAGCAAACATATGTTGATCTTACGTTGCCAGCAGAAACGATTGTGCCATCGACATCAAAATCTGCCGGACAAAATGTTGTCTCTGATAAACCAGACTACGGTTTAGCATTGCCACCGCCTAAATACAAGCAAAATAGAAACATTGAATATGAAACTATTATAGACTTGAAGGCATCAAAACCCGCCGACAAAATTAATATTGATGAAAGTTATTTTGTGGATCACTTTATGCCATGA
Protein Sequence
MSDENSEFSSEESEDLENSTAITEIDIEEHKPGTSAFVSHEASTPVATSSHGENAKLSKIETALICNRILDVKLRKLEELLQTRLLECRRRLTEVQGGQVPEANASEPRKRKFTYAIFGKPYFKDRRGFPAPDNEDTILMNKSEMFNFSNTCSAPGWTVKDKCEVSKLIHKMSKEIKKEQLSSQILSLQRENKRLKSTKNNRKISILKKELVGVNRESLQTLALPIDEEYDWHHIANQMNSRHTANEYRAXXXXXXXXXXXXXXXXXXXXXXXQKIASEKELQDWDAIAQELGTGRTSYQCFVYFRTNMNNNFTKRTWTKEEENHLLLLIQYHREGNYIPWGKVAASMENRTNIQVYNKYARLLESRKGKFLPEEDSVILTCVNKFGPKYRKITEYLQGRSITQVRERHHLLTKRQYSTVWTIEEDRRLVRLLANQDGSTNFSNVSQYFPGKDRVHVRTRYTTLCRWMRRNPNVDLKHAPRRGPRRLEQGRSTDDLNKAIENLKKRVEEDALEGRKEAKDIIIKKKSQISKDSPEDDIDEAIVALITKEEARKIDARNLQASQEGQEKDSVIDEENKSCNITVLRNILILLKAKLNKQKFKDSPLCNTYKGLLDCKPGQNTVRISTYSRKDSFKKTVMAEKVDIWGNTLKKPLSCVLPPHYATITGCKQLMKHFVSPEAEMKDSKHMNFFIKNVKVKEEIDLLMERFNSLFLWPMLLSSVSPEDCKMTNAELTSKTVTKYVDCKKEDYGLALPRPRYKQTYVDLTLPAETIVPSTSKSAGQNVVSDKPDYGLALPPPKYKQNRNIEYETIIDLKASKPADKINIDESYFVDHFMP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00954406;
90% Identity
iTF_00954406;
80% Identity
-