Basic Information

Gene Symbol
-
Assembly
GCA_905333055.1
Location
HG995231.1:1465393-1468105[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 5 0.12 1.2e+02 3.3 0.0 22 37 231 247 227 254 0.83
2 5 6.7e-09 6.8e-06 26.5 0.1 1 45 262 308 262 309 0.94
3 5 1.5e-08 1.5e-05 25.3 0.3 1 45 315 363 315 364 0.94
4 5 7.2e-10 7.3e-07 29.6 0.0 1 41 368 408 368 411 0.97
5 5 2e-08 2e-05 24.9 0.0 3 44 420 463 418 464 0.94

Sequence Information

Coding Sequence
ATGAGTGATGAAAACAGTGAGTTTAGTAGCGAAGAAAGCGATGATTTAGAAAATAGCACTGCAATAACAGAAATAGATATTGAGGAACACAAACCCGGCACGAGTGCTTTCGTATCTCATGAAGCGTCTGCACCTGTGGCGACTTCGAGTCACGGGGAGAACGCCAAACTATCCAAAATCGAAACCGCCTTAATATGTAATAGAATACTGGATGTGAAATTGCGAAAACTTGAAGATTTACTGCAAACTCGATTACTCGAATGCCGCCGGAGACTAACTGAAGTTCAAGGTGGCCAAGTCCCCGAGGCGAACGCGTCGGAGCCGCGAAAACGAAAATTTACCTATGCCATCTTTGGGAAGCCATACTTTAAAGACAGGCGAGGTTTTCCCGCCCCGGACAACGAGGACACCATATTGATGAATAAATCTGAGATGTTCAACTTCTCGAACACATGCTCTGCTCCCGGATGGACTGTGAAGGACAAGTGCGAAGTTTCCAAGCTCATACACAAGATGTCGAAAGAAATTAAGAAGGAACAATTAAGTTCACAAATTCTATCCCTACAACGTGAAAATAAAAGATTGAAATCAACAAAAAATAATAGGAAAATATCCATCCTCAAAAAAGAGCTCCTTGGTGTCAATAGAGAGTCTCTCCAAACATTAGCTCTTCCGATAGACGAGGAGTACGACTGGCATCACATCGCTAACCAGATGAACAGCAGGCACACCGCTAATGAATATAGAGCTCTATGGAAACTTTTCCTGCATCCATCTATAAATAAAAATACTTGGTCCAAATCGGAACATGTTTCTTTGCAAAAAATTGCCTCCGAAAAGGAGTTGCAAGACTGGGATGCTATAGCTCAGGAGCTGGGCACCGGCAGAACCAGCTACCAGTGCTTTGTTTACTTCCGTACCAACATGAACAACAACTTTACAAAACGAACTTGGACAAAAGAGGAGGAAAATCATCTCTTGCTGTTAATCCAATATCATAGGGAGGGCAACTATATTCCTTGGGGCAAAGTTGCAGCCTCAATGGAAAATAGGACTAACATACAGGTTTATAACAAGTACGCTCGCCTCTTAGAATCCAGAAAAGGCAAATTTCTTCCTGAGGAAGATTCTGTTATACTAACGTGTGTCAATAAATTTGGGCCAAAGTACAGAAAGATAACTGAATATCTCCAGGGTCGTTCCATAACTCAGGTCCGGGAAAGACACCACCTCTTAACCAAAAGACAATATTCAACAGTTTGGACAATTGAGGAAGATAGGAGATTAGTTCGGTTGCTAGCCAACCAAGATGGATCTACTAATTTTTCAAATGTGTCACAATATTTTCCAGGAAAAGATAGAGTACACGTTAGAACTAGATACACAACATTATGTAGATGGATGAGAAGAAATCCTAATGTGGACCTCAAGCATGCACCGAGGCGTGGCCCAAGGCGTTTAGAACAGGGAAGGTCTACTGATGATCTCAATAAAGCTATAGAGAATTTAAAAAAACGTGTAGAAGAAGATGCTTTAGAAGGCAGAAAGGAAGCTAAGGACATAATTATCAAGAAGAAATCACAAATAAGTAAAGATTCACCAGAAGATGATATCGATGAAGCAATAGTAGCCCTTATCACTAAGGAGGAGGCGAGGAAAATAGACGCACGAAATTTACAAGCATCCCAAGAGGGACAAGAAAAAGATTCTGTAATTGATGAAGAGAACAAGAGTTGTAATATTACAGTTCTTCGAAATATACTGATTTTATTGAAAGCAAAATTGAATAAGCAAAAGTTTAAAGATAGTCCGTTATGTAATACATACAAAGGCCTACTAGATTGCAAACCTGGGCAGAACACAGTTAGAATCAGCACATATTCAAGAAAAGATTCATTCAAAAAGACTGTAATGGCAGAAAAAGTAGACATTTGGGGAAATACCTTAAAAAAGCCATTGTCATGTGTGCTTCCACCGCATTACGCAACAATTACTGGCTGCAAACAATTGATGAAACATTTCGTCAGCCCTGAAGCAGAAATGAAAGATTCCAAACATATGAATTTCTTTATCAAAAATGTTAAGGTCAAGGAGGAAATTGATCTTCTCATGGAACGCTTTAATTCCTTATTCCTCTGGCCGATGCTTCTATCGAGTGTGTCGCCAGAAGATTGTAAAATGACAAATGCAGAATTAACATCAAAAACTGTCACAAAATATGTTGATTGTAAAAAAGAAGACTATGGTCTTGCATTGCCACGACCTAGATACAAGCAAACATATGTTGATCTTACGTTGCCAGCAGAAACGATTGTGCCATCGACATCAAAATCTGCCGGACAAAATGTTGTCTCTGATAAACCAGACTACGGTTTAGCATTGCCACCGCCTAAATACAAGCAAAATAGAAACATTGAATATGAAACTATTATAGACTTGAAGGCATCAAAACCCGCCGACAAAATTAATATTGATGAAAGTTATTTTGTGGATCACTTCATGCCATGA
Protein Sequence
MSDENSEFSSEESDDLENSTAITEIDIEEHKPGTSAFVSHEASAPVATSSHGENAKLSKIETALICNRILDVKLRKLEDLLQTRLLECRRRLTEVQGGQVPEANASEPRKRKFTYAIFGKPYFKDRRGFPAPDNEDTILMNKSEMFNFSNTCSAPGWTVKDKCEVSKLIHKMSKEIKKEQLSSQILSLQRENKRLKSTKNNRKISILKKELLGVNRESLQTLALPIDEEYDWHHIANQMNSRHTANEYRALWKLFLHPSINKNTWSKSEHVSLQKIASEKELQDWDAIAQELGTGRTSYQCFVYFRTNMNNNFTKRTWTKEEENHLLLLIQYHREGNYIPWGKVAASMENRTNIQVYNKYARLLESRKGKFLPEEDSVILTCVNKFGPKYRKITEYLQGRSITQVRERHHLLTKRQYSTVWTIEEDRRLVRLLANQDGSTNFSNVSQYFPGKDRVHVRTRYTTLCRWMRRNPNVDLKHAPRRGPRRLEQGRSTDDLNKAIENLKKRVEEDALEGRKEAKDIIIKKKSQISKDSPEDDIDEAIVALITKEEARKIDARNLQASQEGQEKDSVIDEENKSCNITVLRNILILLKAKLNKQKFKDSPLCNTYKGLLDCKPGQNTVRISTYSRKDSFKKTVMAEKVDIWGNTLKKPLSCVLPPHYATITGCKQLMKHFVSPEAEMKDSKHMNFFIKNVKVKEEIDLLMERFNSLFLWPMLLSSVSPEDCKMTNAELTSKTVTKYVDCKKEDYGLALPRPRYKQTYVDLTLPAETIVPSTSKSAGQNVVSDKPDYGLALPPPKYKQNRNIEYETIIDLKASKPADKINIDESYFVDHFMP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00954407;
90% Identity
iTF_00954407;
80% Identity
-