Basic Information

Insect: Maniola hyperantus
Gene Symbol: rst2
Assembly: GCA_902806685.1
Location: NC:249203-261419[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.043 1.6 8.8 0.7 3 23 153 173 151 173 0.97

2 15 0.0022 0.086 12.9 2.8 1 23 468 490 468 490 0.99

3 15 0.00011 0.0042 17.0 0.9 1 23 496 519 496 519 0.96

4 15 0.039 1.5 9.0 4.7 1 23 524 547 524 547 0.94

5 15 2.8e-07 1.1e-05 25.1 0.6 2 23 706 727 705 727 0.98

6 15 0.00086 0.033 14.2 2.1 1 23 733 755 733 755 0.98

7 15 3.4 1.3e+02 2.9 7.1 1 21 822 842 822 844 0.92

8 15 3.8 1.5e+02 2.7 0.1 1 23 851 873 851 873 0.93

9 15 0.0053 0.2 11.7 1.3 1 23 879 901 879 901 0.95

10 15 0.00032 0.013 15.5 1.9 1 23 907 929 907 929 0.96

11 15 0.01 0.4 10.8 4.1 1 23 938 960 938 960 0.98

12 15 0.00016 0.0061 16.5 0.6 2 23 1007 1028 1007 1028 0.97

13 15 0.005 0.19 11.8 4.4 1 23 1045 1067 1045 1067 0.96

14 15 1.8e-06 6.9e-05 22.6 0.5 1 23 1073 1095 1073 1095 0.98

15 15 1.2e-06 4.5e-05 23.2 3.1 1 23 1101 1124 1101 1124 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.043	1.6	8.8	0.7	3	23	153	173	151	173	0.97
2	15	0.0022	0.086	12.9	2.8	1	23	468	490	468	490	0.99
3	15	0.00011	0.0042	17.0	0.9	1	23	496	519	496	519	0.96
4	15	0.039	1.5	9.0	4.7	1	23	524	547	524	547	0.94
5	15	2.8e-07	1.1e-05	25.1	0.6	2	23	706	727	705	727	0.98
6	15	0.00086	0.033	14.2	2.1	1	23	733	755	733	755	0.98
7	15	3.4	1.3e+02	2.9	7.1	1	21	822	842	822	844	0.92
8	15	3.8	1.5e+02	2.7	0.1	1	23	851	873	851	873	0.93
9	15	0.0053	0.2	11.7	1.3	1	23	879	901	879	901	0.95
10	15	0.00032	0.013	15.5	1.9	1	23	907	929	907	929	0.96
11	15	0.01	0.4	10.8	4.1	1	23	938	960	938	960	0.98
12	15	0.00016	0.0061	16.5	0.6	2	23	1007	1028	1007	1028	0.97
13	15	0.005	0.19	11.8	4.4	1	23	1045	1067	1045	1067	0.96
14	15	1.8e-06	6.9e-05	22.6	0.5	1	23	1073	1095	1073	1095	0.98
15	15	1.2e-06	4.5e-05	23.2	3.1	1	23	1101	1124	1101	1124	0.98

Sequence Information

Coding Sequence: ATGTGCTCAAATCTATACAGAACCACTGaTTTCAAAATGAATAATCCAATCGCACCAGATCTTGATCCTCTAAGCTCTTACAATCTGAACAACTATCCCAATTTGGAAAGTTTCGCAAATCCACTGCTGCCTTTCGGAAACCAGTATCCATATTCCGTTAAACTAGAGAGTTACCAAAATCCTAACTATTACAATCTACCGCACGGAATACCACCTCACTTTACCCAAGATATTGCAAATACTAGTGTCAATGCTACGTTAGAAGATACGGGTAACGAAGCACAAACAGTCACGGAACAAGATCAATATAACGGATACCAAAACAACATAGATATCACGGAAGAGCAGGATATTAAACCTGATATAAGTAAATTGctgaataagaaaaaaattaaaaaggagCGTAGCAAATACTTCTCGGAGAAGATCACCGAGAAGGATTTCAAATTTTATGGGTGCTCCGTTTGCAATATCAACTTCAAGGAGCTGCACGAGCTAGATAACCATGTGACGACACACAAGGATAGACTGACCAGCTATGATTGGAGAGTGAAGAGTCAGATaatgaagaagaagatgaagaaAGAGTTGAAGAAGAATAAGAAGTTGAGGAAGAAAGTCAAAGCCGAACCTGAAATGGAGATTGATATAGAAATTAAACCAGAGGAGGGATATATAGgtaacgaAAAAGCATCCGACTTTGTCGACAACACAGAATCCAACAACCAGAGTTCACAGGAAAACAGTGGAGAGAAGATGGAAAACAAAGACACAAAAACAATGGAAACCAACAATGTGAACAATAAGCAAGAATTGAACCAAGAGACCAAAATAATGGAAACCAACACTACAAACAAAAAAGAAGAATTGAATAGAGAGATAAAAACAACAGAAAACAACAAGCAAGATTCAAACAAAGAGATAAATGCAGTGGAAACCAACCAACAAGAATTGGACCAAGAGATAAAAGCAATGCAAAACGATACGCAAGAATTGAACAAAGATACTAAAACAATGGAAACAAACACTACAAACAACGAACAAGAATTGAACCAAGACATAAATGCAATGGAAATCAACAAGCAAGAATTAAATCAAGATATAAATGCAATGGGAACCAACAAGCAAGAATTGAACCAAGATATAAATGCTATGGGAACCAACAAGCAAAAATTGAACAAAGATATAAATGCAATGGGAACCAACAAGCAAGAATTGAACAAAGAGATAACTGCAATGGAATCCAACAAGCAAGAATTGAACATAGAGATAAGTGCAATGGAATCCAACACTACAAACAACAGGCTAGAATTGAATGTAGGGACAAATATAATGCAGCCAACAATACCTATGCCTATGAATGCAGCCAACAGACAAGAGTTGCTGAACTTGCAGAAGATATACAAATGCTTTGCATGTCAGAAACAGTTCACACTGAGCTACTATTTGAAACTACATGTCAGATCTCATacagATGAAAAACCTTACACTTGTGGGCAGTGCGGCCAGTCCTTCATCACGGCCAGCAAGCTGGGGCGGCACAACAAGAGATTCCATCTCGCCATACGTTACCAGTGCAGGATATGCTATAGATACTTTTCTAGATTTGAATTCTTAACTCGACATTTCGACAAAAAACATCCAGATGACAAGTTGGAAGGAGAACCGTATGATTTCAACGCTATACTACCCTACTTAAAAGAATTAGAAGAGCAACTCCGCGAGAAAACCGAAATGGAGAAAGCCGCAAAAAAACCGGACCCTTGGTCCTTTGAAGTTGAAACCAAAACTGAACTCGATGTAGTGAAGGAGGAGTCCCAAGACGATCCACAGGATGGACAGATAACAGTTACCATAGAGCAAGTGAAAGTCGACATGGACGGGGTGGGGGTGGAGGTGAAGGTTGAAGAGTTGGACGTCAAAGAGGATATtcgtggtgatgatgatgatcaccatgatgatgatgatgggttcGGTGATGTTAAAGATGAAAGTGATCATATGAAGGATGAGAATGTCTCAGACGATGACTATTTCCCTTCAAACACTTGGGCATCAAAACCAGCCATAGAAGACCCTCCATCTCCAAAAAAACTCAAATTAGAGGACAGAGTGAAATGTCCAATCTGCGAGAAGAAATTCAGCTCGGCCTCATACATGAGGATTCATATGCGGACACATACTGGAGAAAAGCCGTTCAAGTGCTACATATGTAATGCGGGCTTTATCACCTCCAGCAAAATGCATCGTCACGTGTTGACTCATCCGGAGTCCTGGGCAGATGATGACGTCAAAGAGGAAAAAGATAGTAAAGAGGCAATAGACATCAAAACCGAAGAGGGAGAAAATACAGAAGGGGACAAGAAAGCTAAGAAAAaATTGAGAATGAAAAAAGTTCTAGCGAACCTGAAcaagaagtcgcgggcttcgGACAAGAAGAAGAGGCTCAACCAGAAGCGGCCGCACTCTTGCGAATATTGTCAGAAGAGATTCCTGCATCTCGAGACCTTGCAGGTCCACAAGAAGTGCCACGAGGGCGAGAGCCTGGTGTTCAAGTGCAACTTCTGCCTCGTGGAGTACGCGGACGAGGCGGCGCGGAAGGCCCACGAGGCCTCGCACCAGGGCCCGAAGCCCTATCTGTGCACCATATGCGGACGCGGCTACAAGAAACGGGAAACCATGATATACCATCGTAAGAACCATAAGCCGGACCGCGAGTTCATATGTGACATTTGCACCAAGAGCTTCAACGCGCAGTGCAAGCTGCAGCGACATATAGTCAGCCACCGCACGCAACGGTTCATTCTGCGCTACGAGTGCCCTGTGTGTGCTCACATGTTCCACACCAAGTACCATGTGCAGATGCACCTCGCCACGCACCAGAAGGAGGGCCTAATCCAAGAGGAAAACCGCAGCGAAATCCTAGCGATGGTGCTGCAAAACGCGCGGAAAATACCCAAAAGTGCGGACGCGCCCCCCACCCTCACCGACATAGTTCCCAGCGACGAGCGGAGCCGCGTGTGCAACATATGCGGGGAGgtattcCAGCACTTCTACTATCTAGAAGAACACCTAAAGAGTCACGGTTCGAAAATAGCCATAGAAGACAGCGAGAAAAGTGAGGAGAAAAAGCATGTATGCCCCATTTGCAACAAAGGATTCAAGCTACATTATTACCTAAAACTGCACAGTTTCACACACACTAAAGAAAAACCTTTCATCTGCCAACAGTGTGGAAAGGGCTTTATAACTCGCGGCAAACTAAAACGGCACATAGAAACCCATACGGGCTTGAAAAAGTACCAATGTCATGTTTGCTACAAATTTTTCACTAGACCTAGTTACTTAAGGATCCATGTTAGGACTATTCACGGCACTCAGGACTATAATTTTAGGATGGAAAAGTCTTATAATAACTTTGGCGCCGATTACACGCCATGA
Protein Sequence: MCSNLYRTTDFKMNNPIAPDLDPLSSYNLNNYPNLESFANPLLPFGNQYPYSVKLESYQNPNYYNLPHGIPPHFTQDIANTSVNATLEDTGNEAQTVTEQDQYNGYQNNIDITEEQDIKPDISKLLNKKKIKKERSKYFSEKITEKDFKFYGCSVCNINFKELHELDNHVTTHKDRLTSYDWRVKSQIMKKKMKKELKKNKKLRKKVKAEPEMEIDIEIKPEEGYIGNEKASDFVDNTESNNQSSQENSGEKMENKDTKTMETNNVNNKQELNQETKIMETNTTNKKEELNREIKTTENNKQDSNKEINAVETNQQELDQEIKAMQNDTQELNKDTKTMETNTTNNEQELNQDINAMEINKQELNQDINAMGTNKQELNQDINAMGTNKQKLNKDINAMGTNKQELNKEITAMESNKQELNIEISAMESNTTNNRLELNVGTNIMQPTIPMPMNAANRQELLNLQKIYKCFACQKQFTLSYYLKLHVRSHTDEKPYTCGQCGQSFITASKLGRHNKRFHLAIRYQCRICYRYFSRFEFLTRHFDKKHPDDKLEGEPYDFNAILPYLKELEEQLREKTEMEKAAKKPDPWSFEVETKTELDVVKEESQDDPQDGQITVTIEQVKVDMDGVGVEVKVEELDVKEDIRGDDDDHHDDDDGFGDVKDESDHMKDENVSDDDYFPSNTWASKPAIEDPPSPKKLKLEDRVKCPICEKKFSSASYMRIHMRTHTGEKPFKCYICNAGFITSSKMHRHVLTHPESWADDDVKEEKDSKEAIDIKTEEGENTEGDKKAKKKLRMKKVLANLNKKSRASDKKKRLNQKRPHSCEYCQKRFLHLETLQVHKKCHEGESLVFKCNFCLVEYADEAARKAHEASHQGPKPYLCTICGRGYKKRETMIYHRKNHKPDREFICDICTKSFNAQCKLQRHIVSHRTQRFILRYECPVCAHMFHTKYHVQMHLATHQKEGLIQEENRSEILAMVLQNARKIPKSADAPPTLTDIVPSDERSRVCNICGEVFQHFYYLEEHLKSHGSKIAIEDSEKSEEKKHVCPICNKGFKLHYYLKLHSFTHTKEKPFICQQCGKGFITRGKLKRHIETHTGLKKYQCHVCYKFFTRPSYLRIHVRTIHGTQDYNFRMEKSYNNFGADYTP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00954886;
90% Identity: -
80% Identity: -