Basic Information

Insect: Maniola hyperantus
Gene Symbol: L
Assembly: GCA_902806685.1
Location: NC:8149398-8218704[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 1.2e-06 4.8e-05 23.1 2.4 1 23 129 151 129 151 0.99

2 17 8.3 3.2e+02 1.6 7.7 1 23 157 179 157 179 0.97

3 17 8.9e-06 0.00035 20.4 4.1 1 23 185 207 185 207 0.99

4 17 1.2e-05 0.00048 20.0 0.1 1 23 213 235 213 235 0.98

5 17 0.0015 0.057 13.4 0.2 2 23 251 273 250 273 0.94

6 17 6.3 2.4e+02 2.0 0.1 9 23 303 318 299 318 0.93

7 17 0.32 12 6.1 0.0 3 23 374 394 373 394 0.97

8 17 0.18 6.8 6.9 0.0 3 23 409 429 408 429 0.91

9 17 0.00063 0.024 14.6 0.2 1 23 437 460 437 460 0.91

10 17 0.0098 0.38 10.9 0.1 1 23 465 488 465 488 0.94

11 17 9.5e-06 0.00037 20.3 0.6 1 23 548 572 548 573 0.96

12 17 0.00021 0.0081 16.1 0.1 2 23 631 652 630 652 0.96

13 17 0.058 2.2 8.4 0.0 1 23 660 682 660 682 0.98

14 17 8 3.1e+02 1.7 0.7 2 23 690 711 689 712 0.90

15 17 0.49 19 5.5 0.6 1 23 786 808 786 808 0.94

16 17 0.0057 0.22 11.6 0.1 1 20 816 835 816 838 0.95

17 17 0.11 4.1 7.6 0.3 1 23 845 867 845 867 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	1.2e-06	4.8e-05	23.1	2.4	1	23	129	151	129	151	0.99
2	17	8.3	3.2e+02	1.6	7.7	1	23	157	179	157	179	0.97
3	17	8.9e-06	0.00035	20.4	4.1	1	23	185	207	185	207	0.99
4	17	1.2e-05	0.00048	20.0	0.1	1	23	213	235	213	235	0.98
5	17	0.0015	0.057	13.4	0.2	2	23	251	273	250	273	0.94
6	17	6.3	2.4e+02	2.0	0.1	9	23	303	318	299	318	0.93
7	17	0.32	12	6.1	0.0	3	23	374	394	373	394	0.97
8	17	0.18	6.8	6.9	0.0	3	23	409	429	408	429	0.91
9	17	0.00063	0.024	14.6	0.2	1	23	437	460	437	460	0.91
10	17	0.0098	0.38	10.9	0.1	1	23	465	488	465	488	0.94
11	17	9.5e-06	0.00037	20.3	0.6	1	23	548	572	548	573	0.96
12	17	0.00021	0.0081	16.1	0.1	2	23	631	652	630	652	0.96
13	17	0.058	2.2	8.4	0.0	1	23	660	682	660	682	0.98
14	17	8	3.1e+02	1.7	0.7	2	23	690	711	689	712	0.90
15	17	0.49	19	5.5	0.6	1	23	786	808	786	808	0.94
16	17	0.0057	0.22	11.6	0.1	1	20	816	835	816	838	0.95
17	17	0.11	4.1	7.6	0.3	1	23	845	867	845	867	0.94

Sequence Information

Coding Sequence: ATGGCAAATGAAGACGAGGCTGAATGGCAGCAAGAAGAATCAAATTTAGAAGAAAAAAGCATGGTTGAAGAGAAGGAAAGCAATGTAGAAGAAAAGTTGGAAGatgatgatgatgcacacAGTTCAAAAAAGCATATTGAGTACGAGTCTGAGGATGTGGCTAATATCAAGTCCGAAAGTATGGATAGCTTCGAGTCAGAAGCGCTGGGCAGCGTGGGCAGCGTGGGCAGCGCGGGCAGCACAGGCGGCAGCTCGTGGCCGTCGTCCACGCCAGAGCCGTCGCCGTCGCCGTCGTCCACGCCCACGTCGCGCGACGCCGCGGACGCCGATGCGGACCCGGATGTCGAGCCGCCTTTCACGCTGGGAGCCACCGAACACACACCATACAAATGTAAATTTTGCGACAAGGCCTTCCCAAGGCTCTCCTACCTCAAGAAACATGAGCAGACTCATTCAGATCAGATGCCGTTCCGCTGCGAATTTTGCTCGCACCTGTTCAAGCACAAGCGTTCGCGCGACCGTCACGTCAAGCTGCACACCGGCGACCGAAAGTATCGCTGCGCGCACTGCGAATCTGCTTTCTCCAGAAGCGACCATCTGAAGATTCACATGAAAACGCACGACAATCAAAAGCCATTTCAATGCACGGTGTGCAACCGCGGCTACAGCACGGCCGCCGCGCTCACGTCGCACATGCAGGGGCACAAGCGTGAACGTGAGGGCCGTGAAACTAACCGGAAGCGTGCCTTGCACTGCTTGCGCTGCGGCGATGCGTTCCGGCGACCTGATCTCTtacaaGCTCATATGGCGAGCGTCCACGGTGTCGACGAAACCTCGATGACACCTCCACGTCGAGTCGCATCCCAGCCACCACCGCTACTTGCTTGCATTTATTGCACTCGTGACACGTTTACCAGTATGGAGCAGTTACAGCTACATGTACGCGCAGCTCACTCGGCACTGTTGAACGGAGAAAGTTCTGCGCAGTACACAATTGACCAGCCGATGCCGACTGACCTGAGCAGACGTAGTCCTGAAACGTCAACACCTGCTAAGCGTGCTAAGTTAAACTCGGGCTGTACAACACCAAAAAATGCTCTTTCCCCGAGCACGCTTTTGTGTAATCAGTGCGACGCAGCGCTCCCAGACTTTGAAGCTTTTCGTGCCCATTTGAAAGGTCATCTGGAAGAAGGCGGAGAGTTAGGAAGGACGAGCCCCGCACCTTGCCTCCACTGTGGTGCAACGTTTGCTGATGCAGCGGCCTCCGAGCGCCACCTGGCCGCTCATTACCTTGCTGTGTCTTGTGAATATTCTTGCCCCAGTTGTGTGCGCAATTTCCCAACACCGGAAGATTTGCAAAAACACCTGTTCGATATGCACGCTCATCATATGTACCAGTGCAATCTTTGCAAAGAAATATTCGATTCTAAAGTTGCTATTCAGGCTCATTTCGCAATGTCACATAGCACTGAGAACAAAGTGTGGGTGTGTCGATCCTGTGGCTCGGCCGGAGGAGCGCTGCGCTCGGAGGCGGAGGGCGCGGCGCACGTGCGCGCGCGGCACGCGGCTTCGCGCTGCGGGTGCGGCGCCGTGCTCGCGGGCGCACGCGCGCTGCGGGCACACGCGGCCGCACATCACACCTACCGGTGCCCTGTTCCTACTTGCACTGAATCTTTCGCCGTGCAGTATCTACTTGAGCGGCACATGCAAACTCATCATGCTGTTACGCACCAAGGTCTCAACGGTGATATAATCAGAGGCAAGCGAACAGAAAATAACAACGCTGTTGAAGGCGATGGTGCGAGTTCTCCTTGCATCAGTGGTGATGGTCACGTGCCCATGGTTCCAGGCGGAGAAGAACGTAGGCGAAAGAATGGAGCAGTGGCATTACAGTGCGCGTATTGCGGCGAGCGCACGCGCAGCAGGGCGGAGCTGGAGGCGCACACTCGCGCGCACTCCGGCGCAAGCGCGGCGCGGCATAAGTGTCTCATCTGTGATGAAGTGCTGCCGTCAGCTGGCGTCCTGGCCGAGCATAAACTTACACATTGCAAGGTAGTTGGTGGTGATACGTGTGCTCGATGTCGTTCAAGGCTACCTTCAGAAGAAGCTTTCTTGAGCCACATGGCACGTCACCATCCTGCGTTGCCGGCCCCTTGCGTCATTTGCCGTCAAACTTTAGCTTCCGAGGCTGAAGCGCGCTTGCACGCCCGTTTCCATTTACGGCCGAATGAAGACGAACAAAGGTGTGCAATATGTCTAACAGCGTTGTCTGAAAGTGAGGCTGGGGAAGGAGCGAGGGCATGTAGCGCTTGCTACGCCCGTCATGCTGCTCCGAGAGCTCCGCCGCCCTCGGACCACGACTGCCGTCTGTGTCGTCGGACCCTCGGCTCTCCTACCCGTTTACAAGCTCATCTTATCGAACACACGTTCGCCGGTATAGGCGCGTTTACGTGCTACCTTTGCTCTGCGATGTTTACAAGTGCAGCCGGATTGCAAAGGCATTTGCCGGAACATGCTACAGCACCTAGACCTTATGACTGTGGTCGATGCGGGTTAAAGTTTTTCTTCCGCGCGGAACTCGATAACCACGCATTCGTCCATCTCGAAGAAGCCGAAATCGCTCAGAGGGCATTTTATGAAGCCTATGCACGTGGGGCGGCGTCGGCATGGGCTGCTTTGCAACCGACGGACGTAGCGCCGCAGCCTACGGTGTCCACTCCGGCATCAGTGGATAACGAAGTGACAGTCAAGCAAGAACCGGAAGTGAAAGAAGAACGTAATGATGAATATATTGAAGTATCTTCGCCCCCTCCTCAGCCTCAGTCGGCATCTACTTCGCCGGTAGTGAAACAAGAGAAGCCTGACGAAGACTGA
Protein Sequence: MANEDEAEWQQEESNLEEKSMVEEKESNVEEKLEDDDDAHSSKKHIEYESEDVANIKSESMDSFESEALGSVGSVGSAGSTGGSSWPSSTPEPSPSPSSTPTSRDAADADADPDVEPPFTLGATEHTPYKCKFCDKAFPRLSYLKKHEQTHSDQMPFRCEFCSHLFKHKRSRDRHVKLHTGDRKYRCAHCESAFSRSDHLKIHMKTHDNQKPFQCTVCNRGYSTAAALTSHMQGHKREREGRETNRKRALHCLRCGDAFRRPDLLQAHMASVHGVDETSMTPPRRVASQPPPLLACIYCTRDTFTSMEQLQLHVRAAHSALLNGESSAQYTIDQPMPTDLSRRSPETSTPAKRAKLNSGCTTPKNALSPSTLLCNQCDAALPDFEAFRAHLKGHLEEGGELGRTSPAPCLHCGATFADAAASERHLAAHYLAVSCEYSCPSCVRNFPTPEDLQKHLFDMHAHHMYQCNLCKEIFDSKVAIQAHFAMSHSTENKVWVCRSCGSAGGALRSEAEGAAHVRARHAASRCGCGAVLAGARALRAHAAAHHTYRCPVPTCTESFAVQYLLERHMQTHHAVTHQGLNGDIIRGKRTENNNAVEGDGASSPCISGDGHVPMVPGGEERRRKNGAVALQCAYCGERTRSRAELEAHTRAHSGASAARHKCLICDEVLPSAGVLAEHKLTHCKVVGGDTCARCRSRLPSEEAFLSHMARHHPALPAPCVICRQTLASEAEARLHARFHLRPNEDEQRCAICLTALSESEAGEGARACSACYARHAAPRAPPPSDHDCRLCRRTLGSPTRLQAHLIEHTFAGIGAFTCYLCSAMFTSAAGLQRHLPEHATAPRPYDCGRCGLKFFFRAELDNHAFVHLEEAEIAQRAFYEAYARGAASAWAALQPTDVAPQPTVSTPASVDNEVTVKQEPEVKEERNDEYIEVSSPPPQPQSASTSPVVKQEKPDED

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00842895;
90% Identity: iTF_00954845;
80% Identity: -