Basic Information

Insect: Maniola hyperantus
Gene Symbol: -
Assembly: GCA_902806685.1
Location: NC:3045782-3050187[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.0012 0.047 13.7 4.0 2 23 156 177 155 177 0.95

2 13 0.09 3.5 7.8 0.4 2 23 216 237 215 237 0.96

3 13 3.1e-06 0.00012 21.9 5.8 1 23 244 266 244 266 0.97

4 13 0.00011 0.0041 17.0 1.2 1 23 297 319 297 319 0.99

5 13 3.1e-05 0.0012 18.7 2.9 2 23 327 348 326 348 0.94

6 13 8.4e-07 3.2e-05 23.7 0.1 1 23 354 376 354 376 0.99

7 13 2e-05 0.00076 19.3 3.8 3 23 384 404 383 404 0.99

8 13 4.3e-05 0.0017 18.3 0.8 1 23 410 432 410 432 0.96

9 13 9.4e-06 0.00036 20.3 0.7 1 23 438 460 438 460 0.97

10 13 8e-05 0.0031 17.4 4.1 2 23 467 488 466 488 0.95

11 13 0.087 3.3 7.9 9.1 1 23 494 516 494 516 0.98

12 13 1.6e-06 6.3e-05 22.7 1.1 1 23 522 544 522 544 0.99

13 13 1.6e-05 0.00063 19.6 0.3 1 23 550 572 550 572 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.0012	0.047	13.7	4.0	2	23	156	177	155	177	0.95
2	13	0.09	3.5	7.8	0.4	2	23	216	237	215	237	0.96
3	13	3.1e-06	0.00012	21.9	5.8	1	23	244	266	244	266	0.97
4	13	0.00011	0.0041	17.0	1.2	1	23	297	319	297	319	0.99
5	13	3.1e-05	0.0012	18.7	2.9	2	23	327	348	326	348	0.94
6	13	8.4e-07	3.2e-05	23.7	0.1	1	23	354	376	354	376	0.99
7	13	2e-05	0.00076	19.3	3.8	3	23	384	404	383	404	0.99
8	13	4.3e-05	0.0017	18.3	0.8	1	23	410	432	410	432	0.96
9	13	9.4e-06	0.00036	20.3	0.7	1	23	438	460	438	460	0.97
10	13	8e-05	0.0031	17.4	4.1	2	23	467	488	466	488	0.95
11	13	0.087	3.3	7.9	9.1	1	23	494	516	494	516	0.98
12	13	1.6e-06	6.3e-05	22.7	1.1	1	23	522	544	522	544	0.99
13	13	1.6e-05	0.00063	19.6	0.3	1	23	550	572	550	572	0.97

Sequence Information

Coding Sequence: ATGGCTCCCGATGTAAAATTCGCCCCGTACAGAAAATGCTGTCGTACTTGTTTGAAAGAAGATTCTTTGATGTTTGATCTCTTTGTTGAAAGAATAGAATCCTCGGGCACAAACATCGCTGATATGCTTACATCATGCTCCAAATTAAACATACAAAAGGATGACTCCCTCCCAAatcaaatatgtaggtattgttTTAAAAGTGTCTTAGCTTTTTCGCACTTCAGCTTAATGGCACAAAAGGCTGAAGACAAACTCAAAGAAGCAATGTTAATAAACAACGAAATCAACGAAAATCAGTCTTCTGAAGGTGATGTAatagaaattaaaattgaaaatgttgATCACGAAAACATATTATTCGAATCTCGTgaagaaaattttgaaaatgacAACATAAGTCTAGATGAGAACAAAAATTCTGAACAGTGTAATGAACAGGTTAAACCAGAAAACCCAAAATTGAGTTGTGCTTACTGTAAAAAACATTTTAGTAAACTATCTAAACTGAAACAACATGAAGAGaaacatttaaataaagaaaCATGTATGGATACAAAACATAATAAGAATGGTTTGGCTTTAACAATGAATGATGAAAATCTAGAATTAAATGTAAAGAATGAGTCAAATGATATAGATTTGACGTGTAATATTTGTTCTTCCAGATTAGAATCAATGAATTTGTTGTCAACACATATGAAAATTCATGAAGAGAAAGATGGAATGTACTCTTGTAAAGAATGCAACAAAGTATTTAAGAAAAGGAGCCATTTAAAAAGACACAAAACAATTCATAAAGATCAATTTCCACATGTTGATTTGTTGAATATAATTACACCTAAGGAAAACGTGgatacaaatatattatgtgaaCCAAAGGATCAATTTAAATGCAGCAAATGTCTGTTGGCATTTAAGAGTATTAACTCCCTCTCTGCTCACATGAGGAAGCATACGGAGAAAGGTCGAATCATATCATGCAAGGAATgcaataaaatctttaaaaagctCAGTCACTTAAAACGACATGAAATACAACATGGGATTAACTGTCCATACAAATGTAACGTTTGTCCAAAAGCATTTCCAACGAAAGATGCCTTAGAAGAACATGTAAATAAACACAGAGGGGTAAAACCTCACGGATGCCCGGTCTGTCATAAGAGATTCTCTCATTTGTCAACTTTAACGACACACATAAAGTTACACACTCGTGAAAAAGTGTACCTGTGTCCAAATTGTGGTAAGAAAATGAACTCTAGCACGAATTTGAATCAGCATATGTTGAGGCATACTGGATTGAAGGAATTTGCTTGCACGTTTTGCCCTAAAAGATTTGTTAGTAAAGGGGAACTAAAATCGCACACAATCACGCACACAGGGGAGCGCTCGTGCACTTGCGATCAGTGTGGAGCGACCTTTACCAAGCGCAGCTCACTGACCAAGCATAAAGAACGACATTTGGGCTTAAAGCCACACCAGTGTGAAACCTGCTTGATGAGATTCACTTGCAAAGATCACTTGAAAAGGCATTACCGCATTCACACTGGCGAGAAGCCGTACCGGTGCGACATGTGTGAGCGCGCCTTTACCCAGAGCAACGATCTAGTCAAACATCGCCGCTCACACTTGGGGGACAAGGtctataaatgtcCCCAATGTACGGAGAGTTTTCGTCTCAATGCTGAGTTGCGTCAACACATTTCGGAGCACTTTATAAACTCTCAATTACTAACAACGAATGTTTCCAAGGACCCGTCGACAGATGGCGCTGGTAATAAGGACTATTTAAAACCCTCCTATACTGTAATCGGGACCAATAATGATGATATAATTACAAAGATAAGTAATTCTGTTGAAATGTGA
Protein Sequence: MAPDVKFAPYRKCCRTCLKEDSLMFDLFVERIESSGTNIADMLTSCSKLNIQKDDSLPNQICRYCFKSVLAFSHFSLMAQKAEDKLKEAMLINNEINENQSSEGDVIEIKIENVDHENILFESREENFENDNISLDENKNSEQCNEQVKPENPKLSCAYCKKHFSKLSKLKQHEEKHLNKETCMDTKHNKNGLALTMNDENLELNVKNESNDIDLTCNICSSRLESMNLLSTHMKIHEEKDGMYSCKECNKVFKKRSHLKRHKTIHKDQFPHVDLLNIITPKENVDTNILCEPKDQFKCSKCLLAFKSINSLSAHMRKHTEKGRIISCKECNKIFKKLSHLKRHEIQHGINCPYKCNVCPKAFPTKDALEEHVNKHRGVKPHGCPVCHKRFSHLSTLTTHIKLHTREKVYLCPNCGKKMNSSTNLNQHMLRHTGLKEFACTFCPKRFVSKGELKSHTITHTGERSCTCDQCGATFTKRSSLTKHKERHLGLKPHQCETCLMRFTCKDHLKRHYRIHTGEKPYRCDMCERAFTQSNDLVKHRRSHLGDKVYKCPQCTESFRLNAELRQHISEHFINSQLLTTNVSKDPSTDGAGNKDYLKPSYTVIGTNNDDIITKISNSVEM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00954814;
90% Identity: -
80% Identity: -