Mcon005937.1
Basic Information
- Insect
- Mamestra configurata
- Gene Symbol
- -
- Assembly
- GCA_002192655.2
- Location
- NDFZ01004644.1:43479-50983[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 28 0.0039 0.37 11.9 3.4 1 23 164 187 164 187 0.95 2 28 0.0005 0.047 14.7 0.8 2 20 216 234 215 236 0.92 3 28 0.00015 0.014 16.4 0.1 2 23 267 289 266 289 0.96 4 28 0.89 84 4.5 0.2 2 21 309 328 308 329 0.88 5 28 0.00064 0.06 14.4 1.1 1 23 339 362 339 362 0.96 6 28 0.055 5.2 8.3 0.4 1 23 381 403 381 403 0.95 7 28 0.00029 0.027 15.5 3.4 1 23 442 465 442 465 0.95 8 28 0.0042 0.4 11.8 4.0 2 23 505 527 505 527 0.97 9 28 0.0018 0.17 13.0 0.6 1 23 577 600 577 600 0.97 10 28 0.003 0.28 12.3 0.2 1 23 652 674 652 674 0.97 11 28 3.1e-05 0.0029 18.5 3.7 1 23 685 707 685 707 0.98 12 28 0.0091 0.86 10.8 0.4 2 23 719 740 718 740 0.96 13 28 0.0024 0.22 12.6 1.4 1 23 750 772 750 772 0.98 14 28 0.2 19 6.5 7.7 2 23 808 829 801 829 0.96 15 28 3.6e-06 0.00034 21.5 1.1 1 23 837 859 837 859 0.98 16 28 0.00025 0.024 15.7 0.3 2 23 879 901 878 901 0.97 17 28 0.83 79 4.6 0.3 1 23 919 941 919 941 0.90 18 28 0.063 6 8.1 3.6 1 23 948 970 948 970 0.96 19 28 0.0019 0.18 12.9 2.8 2 23 981 1003 980 1003 0.95 20 28 0.012 1.1 10.4 0.2 2 23 1026 1047 1025 1047 0.95 21 28 1.1 1e+02 4.2 3.6 2 23 1090 1112 1089 1112 0.95 22 28 0.0019 0.18 12.9 0.2 2 23 1128 1149 1127 1149 0.95 23 28 0.24 23 6.3 4.7 3 23 1157 1177 1155 1177 0.96 24 28 0.011 1.1 10.4 0.8 2 23 1188 1210 1187 1210 0.95 25 28 0.15 15 6.9 3.3 2 23 1227 1245 1227 1245 0.90 26 28 0.65 62 4.9 1.9 2 21 1249 1268 1248 1269 0.93 27 28 0.38 36 5.7 0.9 2 23 1318 1339 1317 1339 0.93 28 28 0.0026 0.24 12.5 0.5 2 23 1350 1372 1349 1372 0.95
Sequence Information
- Coding Sequence
- ATGTTGATATACGAGGGCGATGGACTGCCTGACAAGGTGTGCTCGGAGTGCATACAAAAGCTCAGCAGCGCGCATATCTTCAAACAGCAGTGTGAGCGCGCCGACCAGGAGCTGCGCCGCAACTATGTGCCTCCGCCTGGATTCAGCATCAGTCCGCCGCCACCAAACAGACAAAGCAGCGATTCCGCCTTTTCTAATCATACCGACACCTCCAATTTGACCAAGCCCCCTTCTTTCATCGAAGAGAAAGTAACCCCCGCCACCAGGAGCCGGAAACGTAGCGCGGACAGCGTCGACAACGCATCCACTGGCGGTGCCTCCAGCGACTACAGGCCCAGTGGCTCCAAGCGCGTCGAGGAGCTCAGGCGCAGCCACAAGAAACCCAGAAGACTGTCCGGACACGTCTCGCAATTCGATTCTGATTACGAAGACAACAGCGCCTCGTACTTAGCCGAAACAGATTCCGACGAGCCCATACttaaaaatagctttaattgTGAACAATGCCCCAAACATTTCCAGTCCCAAAGAAGTCTCAATGTACATAAGACGAGAATGCACGACAAAAAAGAAAGTCTTGGTGAAAACGCCGTCGTTGATATACCGGCGCAGACAGAGGACGCCACTGACGTGCACGACAAACTGAACTGCGACAAGTGTGGCAAGACGTTCAAGTTAAAGATAATGCTGAAACGTCATCATGAGATATGCGGAAAGGCGACTAGTCCCGTCAAGATGCCGCAGAAAGAGTTGCTCATCTCCTTAGAACCGATCGACGGCATGAAGAACCGAAACATTGTTTGCGAAATGTGTTCTGCCAAGTTCAAGTCTGTCGACAATTTGGCGAAGCATATGAAGGTGGTTCATGCTGCCGTTTTGAAGAGAGAAAAAATTGATAAAGGGGAAAATGGAAAGGTATCAGTTCCATGTATGTACTGCAAGAAGCAGTTCGACGATTACTATGTTTACAGTGCACATTTCAACACGTGTCCGAAAAGGGACATGTCTATGCTATTTGAGTGCCTCATTTGTAAGAAGGTGGTGACGAGAAAGAACAATTATTTGACACATCTGAAGAACTTGCATTTTGAGCCTCGAATGTTGCCGAAGAGTTCGGCACAGCCTGAGGCGCAGGATTACCACGAATGTAGGATGTGCTTGAAGAAGCTTCCCTCCCAAGAGCAGCTGATCACACATCTAGCGGCGCACATGTCCAACATCGATGATAATGATGGTGGAGCAGCTGACAATGATTCTAGGGCAAGCACTATAGACGACGGAGCGTCCATCCAATCAGTGCATAGCCAGACTCCCACCGGTATATTTAAATGTCCAACATGTGACAAAGACTTCAAATATAGGAAAGCTCTTCAAACGCATGAGGCGAGGTGCCATTCTGAAGTACCTGTGCAGGTGAAGATAGAACCACCTGATAAGGCGTCGACGAGCCTTCTAAGCGAGGCAGTGTACAGGCAGACCGAGTCAGAATCTAGTCAGGAAGAGGAAGATAATACTTGTGATATCTGCGAGAAACGGTTCTCCTATCGCCGGGTGCTCCTACACCACAAAAGAACCAAACATAACATGAGCTCAGGCCATAAGCGTGCGAAAATCTACCTCAAAGACTGCTCCGTACGCTGCCTCATCTGCGACCTCGACATGAAAGTCGGAGCGATCAACGAACACAATCAAACCCATATATCTAAGAACATGAGGCCTAGAAACCTGTACACCTGCGCAGAGTGTGAGGATACCTTCAAGAGCTGTTCTGCTCTTGCGAACCACATAAAACTGATTCACAGACTAAAACAGAAGCGGATCGAAGATACCGTGAACCCGTCGGATTTTTGTGAAGTCGTTGTGACAAAAGCGGAACCACTGGAATTTATCCAGAGTCACAACGACTTTGGTGAGGTTCCGGGCGAGAACAAGCCGCTAGTAGATCTCAGCGGCTTCAACTGTCCCATCTGCAATAAGAAAATGCCGACCCTCATTTCTTTGAAGAGGCACGTCAACTGGCATACCAATGTAGGAAATAACGTGCAGAAAAAATACGAGTGCAGCGTATGTAACGAGTCGTTCAAGTTCCAGCGCCACTACAAGATCCACATGCGCGAGCACTACCACGACACGTCGCTGGACCCCAAGCACCTCACGTGCGACATCTGCGGCCGCGTCAGCAAGCACCTCCGCGCCGCGCAGGCGCACATGACCTACCACAAGCAGACGCGCTTCCAGAACAAGGACTACCAGTGCTCCATCTGCGAGCGAGTCTTCCAGCACCGCAAGGTGTACCTCTCGCACATGGCCATCCACTACAAGAAAGGCGACAGCGTGCAGAACACCATCGTGGGTGACGTCATGCCCAACAACGTCGACAGGAGCATCTTCGACGGCACGCACACCTGCCACCTCTGCGGAAAATGCTCCATCTGTAAAGTGAAGTTCACTAACAAACGGAGACTAGAACTTCACACCCGAGCTCACTACGAAGACGACAACGGCCCCTACAAATGCACCATCTGCGGCAAAGGGTTCACAGACGAACGCTACTTCCAAAGACACGTGAAAGGACACAACTTTGACCATCAGTCCCACAAAAAAAGGATCGACAAAATCAGAAAGGATAAAGTAAAATGTCCAATCTGTTCGCGGTTCTACCCCGACCTGGTGAAGCTGATCCGCCACTTGCGCCGCACGCACCCCGAGAGCAAGATGATCAAGTCCGACCCTGACGCGCCGCCGCCGCTTTACTACTCCTGCAAGCTGTGCGCCAAAGTGTTTCTAGATGAACGAAGACTGCAGTCCCACGAGGAAGCTCATTTAAGAAAGCCAGAGTTCTTTAAATGCAAGTTCTGTGGAAAGAAATATATATCGTTAAAAAGCCACACGATCCACATAAAGGGTCACTTGGCGCAGAAACATTACGACAACCCTCTGAAGTGCCCGCACTGCGACGAGACGTTCGTGAAGGGCTACGGGCTGCACCACCACCTGCGCGACGCGCACAACATCAACGAGAGCTGGATCGCCGAGCGCACGGAGCAGCCGCTGTCCGGCCCGCTCAAAGACCTGCAGTGCTCCATCTGTATGAAGGTCCTCGCCAGCAAGGGGAACTACGAGCGGCACATCGACTACCACAACTCTTTAAGGTGTAACTACTGCTTCGATTACTTCAGCTCGCTCAGGTTCCTAGAGGGACATCTTACGTTCGcgtgcaaaaagaaaaaacttttagGCGATACCGAAGTTTACCCTAAGAAAGTAAAATGCAACATTTGCTACAAAGCCTTCCATGTACAAGTAAAACTGGACTGCCACTTGCGGACACAGCACGATATCATAGTCGACAGGGAGCAGAGAACTGGCAAGCAAGAAATTGTCTGCGATTATTGCTTCAAAGTTTTCGAAAACGAGTATGCCCTTAGTACTCACAAGATTTACCATCGAACGGTTGGCTACTACGGGTGCATGTACTGCAAAAAGAAGTTTAGTTCGCTCACTGTGTATCGGAAACATAAGAACCACCACATGGCGCAGCTCAATGTAGACAGCCCGACGAAGTGCGAACATTGTGACGAGACGTTCGTCGCTTTCAGGGAAATGATATACCACATGAGGGATGTACACGGGGATGACAAGGAATGGTTCACAGAGCCCAAGGAGTCCGTCGAGGAGACCTGCCCCATCTGTAACAAACGATTCTACAACCTTCACAAGCATTTGACTTACCATGAAGAAAACAAGTGCAAGAAATGCAGTGAATATTTCTACTCCAGGGCGGACTTCGACAGTCATCTTTGCGCTATTGAGAGCGATGATGAAGGCACGGCATACGTGGGCAACGAGGGCACGTTCCAGTACGAAGAGTGCAGGTTTTGCTTCAAACCGATCACAAAGAAGACCACCAAGCGGCTTCACGACCAGATTCACAAGGGCTCTGGCTCTATATCCTGTAGGTTCTGCTCACTTAAGTTTAAAACTATGGATGCATTCAATATACATGCTTTCTCTCATAGAAGCAGGAAATACACTAAGAAGCCGATAAAATGTCGGAAATGTGGCGAGAAGTTCGTTAAATATGGACCATTTATAAAGCACATGAAGTTGGTTCATAAGTGTGTGAAGAAGCTGCATTACAGAGCAGTTGTGAAGCCAGACAGATGTGTCGTTTGCGGAGACGACTTCCCGAACTTGCACAATCACTATCGCGCACATCTGCTGAACCAGTGTCAGGGTTGTCTCAAGTATTTCACTTCGTACAAGGTGATATCTGCGCACGAGTGCGACAAAGAGGACTCGGACACGTCGAAGGTGTTCACATGTGACGCGAACTTGAACGAGCTTATAAAGACTTATGTTCCTATGGACGAGAAGGATGATGAGAAGTACTACGGCCAGACCGACGAcgaagaagaggaagaagagGATATGATGCCGCAAGTAGTTGGAGAGGAAGAGGAGAGTCAGGAGAGTAAAGATTATAAAGACATGCCTATGCTCCAGTCGCCGATAATATCGGATGTATTGTCGCTGTTCAAGGCGGACATGAATGGGTTGGGTGAGGTGGACGGCGCGGTGGATAAGATGAATGACGTAGTCAATATAACAGATGATGATTCTGTGGATTTGGATGATTCCGTTATGCCAGTTGTTGTAGTTATAGATGATGAGGATTAA
- Protein Sequence
- MLIYEGDGLPDKVCSECIQKLSSAHIFKQQCERADQELRRNYVPPPGFSISPPPPNRQSSDSAFSNHTDTSNLTKPPSFIEEKVTPATRSRKRSADSVDNASTGGASSDYRPSGSKRVEELRRSHKKPRRLSGHVSQFDSDYEDNSASYLAETDSDEPILKNSFNCEQCPKHFQSQRSLNVHKTRMHDKKESLGENAVVDIPAQTEDATDVHDKLNCDKCGKTFKLKIMLKRHHEICGKATSPVKMPQKELLISLEPIDGMKNRNIVCEMCSAKFKSVDNLAKHMKVVHAAVLKREKIDKGENGKVSVPCMYCKKQFDDYYVYSAHFNTCPKRDMSMLFECLICKKVVTRKNNYLTHLKNLHFEPRMLPKSSAQPEAQDYHECRMCLKKLPSQEQLITHLAAHMSNIDDNDGGAADNDSRASTIDDGASIQSVHSQTPTGIFKCPTCDKDFKYRKALQTHEARCHSEVPVQVKIEPPDKASTSLLSEAVYRQTESESSQEEEDNTCDICEKRFSYRRVLLHHKRTKHNMSSGHKRAKIYLKDCSVRCLICDLDMKVGAINEHNQTHISKNMRPRNLYTCAECEDTFKSCSALANHIKLIHRLKQKRIEDTVNPSDFCEVVVTKAEPLEFIQSHNDFGEVPGENKPLVDLSGFNCPICNKKMPTLISLKRHVNWHTNVGNNVQKKYECSVCNESFKFQRHYKIHMREHYHDTSLDPKHLTCDICGRVSKHLRAAQAHMTYHKQTRFQNKDYQCSICERVFQHRKVYLSHMAIHYKKGDSVQNTIVGDVMPNNVDRSIFDGTHTCHLCGKCSICKVKFTNKRRLELHTRAHYEDDNGPYKCTICGKGFTDERYFQRHVKGHNFDHQSHKKRIDKIRKDKVKCPICSRFYPDLVKLIRHLRRTHPESKMIKSDPDAPPPLYYSCKLCAKVFLDERRLQSHEEAHLRKPEFFKCKFCGKKYISLKSHTIHIKGHLAQKHYDNPLKCPHCDETFVKGYGLHHHLRDAHNINESWIAERTEQPLSGPLKDLQCSICMKVLASKGNYERHIDYHNSLRCNYCFDYFSSLRFLEGHLTFACKKKKLLGDTEVYPKKVKCNICYKAFHVQVKLDCHLRTQHDIIVDREQRTGKQEIVCDYCFKVFENEYALSTHKIYHRTVGYYGCMYCKKKFSSLTVYRKHKNHHMAQLNVDSPTKCEHCDETFVAFREMIYHMRDVHGDDKEWFTEPKESVEETCPICNKRFYNLHKHLTYHEENKCKKCSEYFYSRADFDSHLCAIESDDEGTAYVGNEGTFQYEECRFCFKPITKKTTKRLHDQIHKGSGSISCRFCSLKFKTMDAFNIHAFSHRSRKYTKKPIKCRKCGEKFVKYGPFIKHMKLVHKCVKKLHYRAVVKPDRCVVCGDDFPNLHNHYRAHLLNQCQGCLKYFTSYKVISAHECDKEDSDTSKVFTCDANLNELIKTYVPMDEKDDEKYYGQTDDEEEEEEDMMPQVVGEEEESQESKDYKDMPMLQSPIISDVLSLFKADMNGLGEVDGAVDKMNDVVNITDDDSVDLDDSVMPVVVVIDDED
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00785388;
- 90% Identity
- iTF_00952059; iTF_00851025; iTF_00974002; iTF_00772237; iTF_00852051; iTF_00300477;
- 80% Identity
- -