Hdys003091.1
Basic Information
- Insect
- Hecatera dysodea
- Gene Symbol
- -
- Assembly
- GCA_905332915.1
- Location
- HG995288.1:4747715-4758533[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 28 0.0054 0.57 11.8 2.3 1 23 201 224 201 224 0.95 2 28 0.0007 0.075 14.6 1.0 2 20 253 271 252 273 0.92 3 28 5.8e-05 0.0062 18.0 0.1 2 23 304 326 303 326 0.96 4 28 0.00023 0.025 16.1 0.5 2 23 377 399 376 399 0.95 5 28 0.16 17 7.1 0.3 1 23 418 440 418 440 0.95 6 28 0.00042 0.045 15.3 3.5 1 23 478 501 478 501 0.95 7 28 0.01 1.1 10.9 3.7 2 23 541 563 541 563 0.97 8 28 0.0023 0.25 12.9 0.6 1 23 613 636 613 636 0.97 9 28 0.0042 0.45 12.1 0.2 1 23 689 711 689 711 0.97 10 28 0.00089 0.095 14.2 6.4 1 23 722 744 722 744 0.98 11 28 0.022 2.4 9.8 0.3 2 23 756 777 755 777 0.96 12 28 0.0031 0.33 12.6 1.4 1 23 787 809 787 809 0.98 13 28 0.63 68 5.3 5.2 1 23 838 860 838 860 0.94 14 28 0.0036 0.38 12.3 2.7 1 23 871 893 871 893 0.97 15 28 1.2e-05 0.0013 20.1 0.5 1 23 901 923 901 923 0.98 16 28 0.00071 0.076 14.6 0.2 2 23 943 965 942 965 0.97 17 28 1.1 1.2e+02 4.5 0.3 1 23 983 1005 983 1005 0.90 18 28 0.15 16 7.2 4.0 1 23 1012 1034 1012 1034 0.95 19 28 0.0015 0.16 13.5 2.8 2 23 1045 1067 1044 1067 0.95 20 28 0.015 1.6 10.4 0.2 2 23 1090 1111 1089 1111 0.95 21 28 1.4 1.5e+02 4.2 3.6 2 23 1154 1176 1153 1176 0.95 22 28 0.0025 0.27 12.8 0.2 2 23 1192 1213 1191 1213 0.95 23 28 3.5 3.7e+02 2.9 4.1 5 23 1223 1241 1220 1241 0.94 24 28 0.015 1.6 10.4 0.8 2 23 1252 1274 1251 1274 0.95 25 28 0.14 15 7.3 2.3 3 23 1292 1309 1291 1309 0.90 26 28 0.85 91 4.9 1.9 2 21 1313 1332 1312 1333 0.93 27 28 0.49 53 5.6 0.9 2 23 1382 1403 1381 1403 0.93 28 28 0.0035 0.37 12.4 0.6 2 23 1414 1436 1413 1436 0.95
Sequence Information
- Coding Sequence
- ATGGCCCTCAAGCTTGGAAAATGCAGGCTCTGCCTCAAGCTCGGCGACTTTTACTCCATCTTCACGATCGACAATGCTTTGCAGCTCGCGGAGATGGCAATGTCATGCGCCCGGGTGAAAATATACGAAGGCGATGGGCTGCCTGACAAGGTGTGCTCGGAGTGCATTCAGAAGCTCAGCAGCGCGCACATCTTCAAGCAGCAGTGTGAGCGCGCCGACCAGGAGCTGCGCCGCAACTATGTGCCGCCACCTGGATTCAGCATCAGTCCGCCGCCACCTAACAGACAAAGCAGTGATTCCGCATTTTCTAATCATACTGACACCTCTAACTTGACCAAACCCCCTTCTTTAAACGAAGAGAAAGTAACCCCCGCCATCAGGGGCCGGAAACGTAGCGCGGACAGCGTCGACAACGCATCCACTGGTGGCGCCTCCAGCGACTACAGGCCCAGTGGCTCCAAGCGCGTCGAAGAACTCAGGCGCAGCCACAAGAAACCCAGAAGACTGTCCGGACACGTCTCGCAATTAGATTCTGATTATGAAGATAACAGCGTCTCGTACTTAGCCGAAACAGATTCCGACGAGCCCTTACTTGGGAGCTTTAATTGTGAACAATGCTCCAAAAATTTCCAGTCCCAAAGAAGTCTCAATATACATAAGTCTAGAATGCACGAGAAAAAAGAAAGTCTTGGGGTAAACGCCGTCGTTGATATACCTTCGCAGACAGAGGACGCCGCTGACGTCGAGGACAAGCTGAACTGCGACAAGTGTGGCAAGACGTTCAAGTTAAAGATCATGCTGAAACGTCATCACGAGATTTGCGGAAAGACAACAAGTCCCGTCAAGATGCCACAGAAAGAGTTGCTCATCTCCTTAGAACCAATTGATGGGATGAAGAACCAGAACATTACATGCGAAATCTGTTCTGCCAAGTTCAAGACTGTCGACAATTTGGCGAAGCATATGAAGGTGGTTCATGCCGCCGTGTTGAAAAGAGAAAAGTTTGATAAACGAGAAAATGGAAAGGTATCAGTTCCGTGCATGTATTGCAAGAAACAGTTCGACGATTACTATGTTCACAGTGCACATTTCAACACGTGTCCGAAGACGGACAAGTCTTTGCCATTAGAGTGCCCCATTTGTAAGAAGGTGGTGACAAGAAAGAACAATTATTTGACACATCTTAAGAACTTGCATTTTGAGCTTCGAATGTTGCCGAAGACTTCGGCGCAGCCCGAGGCGCATGAGTACCACGAATGTAGGATGTGCTTAAAGAAGCTTCCCTCCCAAGAGCTGCTGATCACGCATCTAGCGGCGCACATGTCCAACATCGATGACAACGATGGCGGAGCTGACAATGAATCTAGGACAAGCACAATAGACGACGGAGCATCCATCCAATCAGTGCATAGTCAGACTCCCACTGGTGTATTTAAATGTCCAACATGTGACAAAGACTTCAAATACCGGAAAGCTCTTCAAACACACGAGGCGAAGTGCCATTCTGAAGTACCGGTTCAGGTGAAGATAGAACCACCTGATAAGGCGTCGACGAGTCTCCTAAGTGAGGCAGTCTATAGGCAGACTGAGTCAGAATCTAGTCAGGAAGAGGACGATAACACTTGCGATATCTGCGAGAAACAGTTCTCCTATCGCCGGGTGCTCCTACACCACAAGAGAACCAAACATAACATGAGCTCGGGGCATAAGCGCGCCAAAATCTACCTCAAAGACTGCTCCGTACGCTGCCTCATCTGCGACCTCGACATGAAGGTCGGAGCGATCAACGAACACAATCAAACGcatatatctaagaacatgAAGCCGAGAAACCTCTACACCTGCGCAGAGTGCGAGGATACCTTTAAGAGCTGTTCTGCTCTTGCGAACCACATAAAACTAATTCACAGATTGAAACAGAAGCGGGTCGAAGAAGATACCGTGAACCCGTCGGATTTTTGTGAAGTCGTTGTGACAAAAGCGGAACCCCTGGAATTTATCCAGAGTCACAACGACTTTGGCGAGGTTCCGGGCGAGGGCAAGCCGCTGGTAGATCTCAGCGGCTTCACCTGTCCCATCTGCAGCAAGAAGATGCCGACCCTCATATCTTTGAAGAGGCACGTCAACTGGCATACCAGTGTAGGAAATAATGTGCAGAAAAAATACGAGTGTAGCGTGTGTAAAGAGtCCTTCAAGTTCCAGTGCCACTACAAGATCCACATGCGCGAGCACTACCACGACACCACGCTGGACCCCAAGCACCTGACGTGCGGCATCTGCGGCCGCGTCAGCAAGCACCTGCGCGCCGCACAGGCGCACATGACCTACCACAAGCAGACGCGCTTCCAGAACAAGGACTACCAGTGCTCCATCTGCGAGCGAGTCTTCCAGCACCGCAAGGTGTACCTCTCGCACATGGCCATACACTACAAGAAAGGCGACAGCGTGCAGAACACCATCGTGGGCGATGCCATGCCCAGCAACGCCGACAAGAGCATCTTCGACGGCACGCACACCTGCAACCTCTGCGGCAAAGTCTGCGACTCAGAAAACTCCCTCAAATGCCATCTCAGCTGGCACAACTCCAAGACCTTCCTGTACGGCGCTCGCCATGAGTGCTCTATCTGCAAAGTTAAGTTCACTAACAAACGGAGACTAGAACTTCACACCCGAGCTCACTACGAAGACGACAACGGGCCCTACAAATGTACCATCTGCGGCAAAGGGTACACCGACGAAGGCTACTTCCAAAGACACGTAAAAGGACACAACTTTGACCATCAGTCCCACAAGAAAAGGATCGATAAAATCAGAAAGGATAAAGTGAAATGTCCGATCTGTTCGCGGTACTACCCCGACCTGGTGAAGCTGATCCGCCACTTGCGGCGCACGCACCCCGAGAGCAAGATGATCAAGTCCGACCCcgacgcgccgccgccgctctaCTACTCCTGCAAGCTGTGCGCTAAAGTGTTTCTCGACGAACGAAGACTGCAGTCACACGAGGAAGCTCATTTAAGAAAGCCAGAGTTCTTTAAATGCAAGTTCTGTGGAAAGAAGTACATATCGTTAAAAAGCCACACGCTTCACATAAAGGGTCACCTGGCGCAGAAACATTACGACAACCCGCTGAAGTGCCCGCACTGCGACGAGACATTCGTGAAGGGCTACGCGCTGCACCACCACCTGCGCGACGCGCACGACATCAACGAGAGCTGGATCGCCGAGCGCACGGAGCAGCCGCTCTCCGGCCCGCTCAAGGACCTGCAGTGCTCTATCTGCATGAAGGTGCTCGCCAGCAAAGGAAACTACGAGCGGCACATCGACTACCACAACTCTTTAAGGTGCAACTATTGCTTCGATTACTTCAGCTCCCTCAGATTCCTAGAGGGACATCTTGTGTTCGCGTGcgaaaagaaaaaacttttggGTGATACTGAAGTTTACCCTAAGAAAGTCAAATGCAATATTTGTTACAAAGCATTCCATGTTCAAGTAAAACTGGACTGCCACTTGCGGACGCAGCATGGCATCATAGTCGACAGGGAACAAAGAACTGGCAAGCAAGAAATTGTCTGTGATTATTGCTTCAAAGTTTTCGAAAACGAATATGCCCTAAGTACTCACAAGATCTACCACAGAACCATTGGTTACTATGGGTGTATATACTGCAAAAAGAAGTTTAATACACTGACTGTGTACCGGAAACACAAGAATCACCACATGGCGCAGCTCAATGTAGACAACCCGACTAAATGCGAACATTGTGACGAGACGTTCGTAGCTTTCAGGGAAATGATATACCACATGAGGGATGTACACGGAGACGACAAGGAATGGTTCACGGAGCCCAAGGAGTCCGTGGAGGAGCCCTGCCCCATCTGTAACAAACGATTCTATAACCTTCACAAGCATCTGACTTACCATGAAGAGAACAAATGTAAGAAATGCAGTGAATATTTCTACTCCAGGGCGGACTTCGACAGTCATCTTTGCGCTATTGAAAGTGATGACGAAGGCACGGCATACGTGGGCAACGAGGGAACGTTCCAGTACGAAGAGTGCAGGTTCTGCTTCAAACCGATCACCAAGAAAAGCACCAAGCGGCTTCACGACCAGATCCACAAGGGCTCTGGCTCTATATCCTGTAGGTTCTGCTCACTTAAGTTTAAAACTATGGACGCTTTCAATATACACGCTTTCTCTCACAGAAGCAGAAAATACACTAAGAAGCCGATTAAATGTCGGAAATGTGGCGAGAAGTTCGTTAAATATGGACCATTTATGAAGCACATGAAGTTAGTACACAAGTGTATAAAGAAACTGCATTACAGAGCAGTCGTGAAGCCGGACAGATGTGTCGTATGTGGAGACGACTTCCCGAACTTGCACAATCACTATCGCGCACATCTGCTGAACCAGTGCCAGGCTTGTCTGAAGTACTTCACTTCGTACAAGGTGATATCTGCGCACGAGTGCGACAAAGAGGACTCGGACCCCTCGAAGGTGTTCACATGTGACGCGAACTTGAACGAGCTGATAAAAACCTATGTTCCTATGGACGAGAAGGATGATGAGAAGTACTACGGGCACACCGACGACGAGCAAGAGGAGGAAGAGGATTCGATACCAGTAGTAGTCGGCGAGGAAGAGGATAGTCAAGATAGCAAAGAGTATAAAGACATGCCTATGCTGCAGTCGCCGATAATATCAGATGTACTGTCGCTGTTCAAGGCGGAGATGAATGGGATGGGTGAAGTGGATGACGTGGTCAACATAACTGATGATGATTCGGTGGATTTGGATGAGTCAGTTATGCCAGTTGTTGTCGTTATAGATGATGATTAG
- Protein Sequence
- MALKLGKCRLCLKLGDFYSIFTIDNALQLAEMAMSCARVKIYEGDGLPDKVCSECIQKLSSAHIFKQQCERADQELRRNYVPPPGFSISPPPPNRQSSDSAFSNHTDTSNLTKPPSLNEEKVTPAIRGRKRSADSVDNASTGGASSDYRPSGSKRVEELRRSHKKPRRLSGHVSQLDSDYEDNSVSYLAETDSDEPLLGSFNCEQCSKNFQSQRSLNIHKSRMHEKKESLGVNAVVDIPSQTEDAADVEDKLNCDKCGKTFKLKIMLKRHHEICGKTTSPVKMPQKELLISLEPIDGMKNQNITCEICSAKFKTVDNLAKHMKVVHAAVLKREKFDKRENGKVSVPCMYCKKQFDDYYVHSAHFNTCPKTDKSLPLECPICKKVVTRKNNYLTHLKNLHFELRMLPKTSAQPEAHEYHECRMCLKKLPSQELLITHLAAHMSNIDDNDGGADNESRTSTIDDGASIQSVHSQTPTGVFKCPTCDKDFKYRKALQTHEAKCHSEVPVQVKIEPPDKASTSLLSEAVYRQTESESSQEEDDNTCDICEKQFSYRRVLLHHKRTKHNMSSGHKRAKIYLKDCSVRCLICDLDMKVGAINEHNQTHISKNMKPRNLYTCAECEDTFKSCSALANHIKLIHRLKQKRVEEDTVNPSDFCEVVVTKAEPLEFIQSHNDFGEVPGEGKPLVDLSGFTCPICSKKMPTLISLKRHVNWHTSVGNNVQKKYECSVCKESFKFQCHYKIHMREHYHDTTLDPKHLTCGICGRVSKHLRAAQAHMTYHKQTRFQNKDYQCSICERVFQHRKVYLSHMAIHYKKGDSVQNTIVGDAMPSNADKSIFDGTHTCNLCGKVCDSENSLKCHLSWHNSKTFLYGARHECSICKVKFTNKRRLELHTRAHYEDDNGPYKCTICGKGYTDEGYFQRHVKGHNFDHQSHKKRIDKIRKDKVKCPICSRYYPDLVKLIRHLRRTHPESKMIKSDPDAPPPLYYSCKLCAKVFLDERRLQSHEEAHLRKPEFFKCKFCGKKYISLKSHTLHIKGHLAQKHYDNPLKCPHCDETFVKGYALHHHLRDAHDINESWIAERTEQPLSGPLKDLQCSICMKVLASKGNYERHIDYHNSLRCNYCFDYFSSLRFLEGHLVFACEKKKLLGDTEVYPKKVKCNICYKAFHVQVKLDCHLRTQHGIIVDREQRTGKQEIVCDYCFKVFENEYALSTHKIYHRTIGYYGCIYCKKKFNTLTVYRKHKNHHMAQLNVDNPTKCEHCDETFVAFREMIYHMRDVHGDDKEWFTEPKESVEEPCPICNKRFYNLHKHLTYHEENKCKKCSEYFYSRADFDSHLCAIESDDEGTAYVGNEGTFQYEECRFCFKPITKKSTKRLHDQIHKGSGSISCRFCSLKFKTMDAFNIHAFSHRSRKYTKKPIKCRKCGEKFVKYGPFMKHMKLVHKCIKKLHYRAVVKPDRCVVCGDDFPNLHNHYRAHLLNQCQACLKYFTSYKVISAHECDKEDSDPSKVFTCDANLNELIKTYVPMDEKDDEKYYGHTDDEQEEEEDSIPVVVGEEEDSQDSKEYKDMPMLQSPIISDVLSLFKAEMNGMGEVDDVVNITDDDSVDLDESVMPVVVVIDDD*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00785388;
- 90% Identity
- iTF_00952906;
- 80% Identity
- -