Mcon007016.1
Basic Information
- Insect
- Mamestra configurata
- Gene Symbol
- sip1
- Assembly
- GCA_002192655.2
- Location
- NDFZ01005446.1:864347-880548[+]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.9e-36 1.9e-31 110.3 2.3 1 172 366 518 366 521 0.96 2 2 9.5e-08 0.0026 18.0 0.0 218 275 521 578 517 578 0.93
Sequence Information
- Coding Sequence
- ATGTCAGACGACGAAGTAATGCGGTTTGAAATTACCGACTATGATTTGGACAATGAATTCAATCCAAACAGAGCCAGGAGAGCTAAGAAAGAGCACCAGATTTACGGTGTATGGGCTAAGGACAGTGACGAGGAGGATAATGAAGACAACGTCAGACAAAGGTCTCGCAAACAGAAAGACTTCACCGCACCCATTGGGTTTGTGGCCGGAGGAGTGCAACAGGCTGGCAAGAAGAAGGAAGAAAGTAAAGAAGTAGAATCATCAGAAGCTTCCACCTCCCGCCCCAAGTTTGCAGCTGACAGCTCAGATGAAGATGAACAGAATGCTCCAGATGCAAGTGAGACTGCAGGGATACGGAGACAGGGGCAAGGCATGAGGCCGGCCAACCTCGGAGGCAATGTGGGGACCTGGGAGAAGCATACTAAGGGTATTGGAGCTAAGCTGTTGTTGAAGATGGGTTACCAACCAGGCATGGGTCTAGGTAAAGACCTGCAGGGTATCTCAGCACCTGTGGAAGCTACTGTCAGGAGAGGTAGGGGAGCTATTGGTGCCTATGGTCCTGAGAAAGCAGCTCAAAAAGCCAAGAAAGAAGAGGAGCTCCGGCGCCTGAAAGAGAAGGAAGACGAGAAAGGGACAAAAGAGAAGACTTACAACTGGAAGAAGTCGCACAAGGGCCGCTACTTCTACCGCGACGCCGCCGACGTCATCCAAGAGGGTAAACCCACGATGCATACTATTACCAGCAACGAGCTGTCCCGCGTGCCTGTGATAGACATGACGGGCAAGGAGAAGCGCGTGCTGAGCGGCTACCACGCGCTGCgagccgccgcgccgcgcttcGAGCACGAGCCGCGCAGGAAGTGCGACAACTTCGCCGCGCCGCAGCTCGTGCACAACCTGGAGCTCATGGTGGAGTGCTGCGAGCAGGATATTATCCAAAACGCCCGAGAGCTCCAATCAGCGGAAGACGAGATCGTCGTCCTGGAACGAGACCTAGAGGAGTGCAACATTAAGCTGTCGGAACAAGACAAGGTGATCAGCAAGGTGGAAGGTGTCCTGCAGCGAGTGGAAATGCTTAACCAGCCCGACGTGTCTTTAGAGCGCGCGCACGACGTGCTGGCTGACTTAAAAGATTCCTACCCAGTGGAATACGAGATGTTTGGCTTGGGGACCATCGCTGGTAACATAGTGAGTCCACTGCTCAGTGCCCTGATAGCCACGTGGGAGCCACTCACAGCTCCTGACGAGCCCGTGCCTACTTTCCTGAAGTGGAGGAAGCTGCTCACTGAGGAGGCTTACAACAGTCTGCTGTGGCAACACTTTGTGCCCGCGCTTACTGCGGCTGCTGAGGCCTGGAACCCCCGCATGCCAACTCCCATGCTCCGCGCAGTATCCGCCTGGCAGACAGCATCACCCGCTTGGCTCACAAAAGCCTGTGTGACACGGTGCGTTGTACCCAGGGTCCTGGCTGCAGTGAGGGCCTGGGACCCCACCAACGACACCCAGCCGCTGCATCAGTGGGTGTTGCCGTGGCATGACATGGCAGGAGAAGCCCTGGCTGGCGCCCACATCGTGCCCAAGCTCGACCACTGCCTGCAGCACGCGCCGCTGGAGCTGGTCGGCAGGGAGAACACGGCGTGGCTGTGGTGCGTAGAGTGGCTGGAGCTGCTGGGAGCGGCCACGGTGGCGGCCATCGCATCGCGCGCACTGCTGCCGCGCTGGCTGGCGGCGCTGGCGGCCTGGCTCAACACCAACCCGCCGCACGCCACTGTGCTCAACTCTTACACGGACTttaagAAAATGTTCCCCGAAGACGTCCTCAAAGAGCCAGCCGTGCGCGACGCCTTCCGCAAAGCCCTGGACATGATGAACCGAAGCGCCGACATCGATTCAGTAGAACCTCCCCCTCCCCCTCGCTTCACCATGCCGGAACTGAAGGAGACTTCCCGAATCACCGAAGTCCTAGCTTCGGCTACCCAAGCCAAAAGCTTCTCAGAGTTACTTGAAACCAGATGCATTGAGAAGGGCATCACTTTTGTGCCAATAGCCGGCAAGACAAGGGAAGGTAGGCCACTGTATAAGATTGGCGATCTTCAGTGCTATGTTATTAGGAATGTGATCATGTTTTCCAACGATGGCGGCAGGAGTTTCGGTCCTATTAGTATGGATAAGTTACTGAGTATGGTGGAGGATTGa
- Protein Sequence
- MSDDEVMRFEITDYDLDNEFNPNRARRAKKEHQIYGVWAKDSDEEDNEDNVRQRSRKQKDFTAPIGFVAGGVQQAGKKKEESKEVESSEASTSRPKFAADSSDEDEQNAPDASETAGIRRQGQGMRPANLGGNVGTWEKHTKGIGAKLLLKMGYQPGMGLGKDLQGISAPVEATVRRGRGAIGAYGPEKAAQKAKKEEELRRLKEKEDEKGTKEKTYNWKKSHKGRYFYRDAADVIQEGKPTMHTITSNELSRVPVIDMTGKEKRVLSGYHALRAAAPRFEHEPRRKCDNFAAPQLVHNLELMVECCEQDIIQNARELQSAEDEIVVLERDLEECNIKLSEQDKVISKVEGVLQRVEMLNQPDVSLERAHDVLADLKDSYPVEYEMFGLGTIAGNIVSPLLSALIATWEPLTAPDEPVPTFLKWRKLLTEEAYNSLLWQHFVPALTAAAEAWNPRMPTPMLRAVSAWQTASPAWLTKACVTRCVVPRVLAAVRAWDPTNDTQPLHQWVLPWHDMAGEALAGAHIVPKLDHCLQHAPLELVGRENTAWLWCVEWLELLGAATVAAIASRALLPRWLAALAAWLNTNPPHATVLNSYTDFKKMFPEDVLKEPAVRDAFRKALDMMNRSADIDSVEPPPPPRFTMPELKETSRITEVLASATQAKSFSELLETRCIEKGITFVPIAGKTREGRPLYKIGDLQCYVIRNVIMFSNDGGRSFGPISMDKLLSMVED
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00450133;
- 90% Identity
- -
- 80% Identity
- -