Mcon011895.1
Basic Information
- Insect
- Mamestra configurata
- Gene Symbol
- -
- Assembly
- GCA_002192655.2
- Location
- NDFZ01000778.1:6560-8725[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1e-08 4.1e-06 27.0 0.0 1 44 16 59 16 60 0.93
Sequence Information
- Coding Sequence
- ATGGTCCGAAATTATGTTAGAAAGACAGACAGGGGAAAGGCATATACTAAAGACAAATTATTAGAAGCCGTAGAAAAGGTGAAGAACGGAGAATTGACTGCTTATAGAGCCTCCATTAATTACCGGATTCCTCGACCGACAATAGTGGCGCGAGTGTATGGCAGATACGGACTGAAATCAGATTCTTTAGGAAGAAGTACAACTATTCGTAAAGAGGTAGAACAAAAATTGGCTCAAAACTTGCACCAGATGGAGAGATATGGATTTGGACTGTCAAGAAAAGAAATTATAGAACTTGTCGGACACTACGTAaccaaaaaccaaataaaaaatccgTTTAAAAATTGCGTTCCGGGCGAAGACtggtttttatcatttaaaaaacgtCACAATTTATCCGTTAAAAAACCACAGGCAGTGGAAAACTCCCGAAAAAAAGCTTGCAATCCATGGGTGATTTActcatattttgatttattaaaaactactaTGGATGAGTTGGGATTGCATGATAAACCATCACAAATATGGAACCTTGATGAGACTAGTTTTAGTAAAGATCCCAGTAAAACCAAAGTGGTGGGTTTGAGAGGATATGCCTCAACAAGAACTATTGCATCTCCCGGGAAAGACAACACCACAGTTTTGTTGGGGTGCAGTGCAGCTGGTGACAAAACCCCaccattaattatatttaaaggaAAGAATATCTGGGATGAGTGGACCACTAATGAGGGCTATCCAGGTACAGATTATGCAGCCACtaaaaatggatggatggaaaCAGACatattccaaacattttttgaaaGAGTTTTTTTACCAACTGTAGGACAAAAACGGCCAATATTACTGATATATGATGGCCATTCCACACATGTTGgtataaatataatcgaaaaAGCTCGTGAGGCAGATATCACAATCTTGAAAATCCCACCGCATACGAGTGACAATTTGCAGCCCTTAGATCTTGCTGTCAACAAATCTTTTAAGGACAAGTGGGATCTAAATTTAGTAAAATGGCAAAGGTTGAATGTGGGTCAAGCTTTACCTAAAAAAGATTTCTCAAAGTTAATTGGCAAAGTATGGGCCGAAGTGGACCCCAAAGTGTGTGCAGCTGGTTTCAGAAAAGCTGCTATTTTTCCTTTCAACGCCAATGCTGTAGCTGAAGAAAAGTTTCACCCAGATCAACTTCTGGAATGGAAAAAACAACAGCATACTGAATTGAGCGAGACTGTATGCGCTTCCCCTGACTATTTGAAAAATTCCAACCCTCAAGTTCAAACCACAGTTATTCAAGCAGTTCCTAGTACTTCGTACTCCGAAgacttgtttatttttccaCATGAAACTGAAATACAGTCTGACAATAACATGGCATTTGACACCAACATGCAATCAAATATTCTTAGGCCATTACCATCATTACtatctatttgtttaaataattggaATGGACATGTCGAAAAACTTACTACACCTGAATATGAAGATACAGAAATTAAGGTAACCAGCTATAACCAGTGCCTTGCCACGacgtttaataaaaacttgtttGAACATCCGTCACCTTCGCAAAACGTTAATGAGACATCACAACCTGTTAATTACGATGCGAAATATCTTAAATGTGTATCTCTTAATTATGATATACATAACAAAATTGAATCTAATGCTAATAAGTTATCACcagtaaaaattataattgaagaTGATCGTatcgtaaaatataatatcacttTTGAGGAACTATTACTCCAGAAAATAAAAGCTGGGAcgcaccacaaaaaaaaacgtactaAGGTCGCTGGCGGTGCCGAAGTCATAACATGTGAAGaggtttataataaacaaaagcaagaaaagttaaaaaagtttaaacaaaaggAAAATAGACGAGAAAAGAAACTACAGAAAgagaaaataaagaataaaaagatGAGAACCTCCAAAAGACAGTCAAAAGTATTATTAACAGATGATTCTACAGGTGGAAGTGACTATGCAGAAGTAGAAGATCAGAAAGAGATAAAAAAGGTGAGAAAATCgcagaattataaaaaaagtcaGCGAAAGACAAAAGGTGATATGAAAAGAAAActtcgcaaaaaaataaaaaaacaatactggATGACTCGACAAGTGAAAGTGATATTGACATAG
- Protein Sequence
- MVRNYVRKTDRGKAYTKDKLLEAVEKVKNGELTAYRASINYRIPRPTIVARVYGRYGLKSDSLGRSTTIRKEVEQKLAQNLHQMERYGFGLSRKEIIELVGHYVTKNQIKNPFKNCVPGEDWFLSFKKRHNLSVKKPQAVENSRKKACNPWVIYSYFDLLKTTMDELGLHDKPSQIWNLDETSFSKDPSKTKVVGLRGYASTRTIASPGKDNTTVLLGCSAAGDKTPPLIIFKGKNIWDEWTTNEGYPGTDYAATKNGWMETDIFQTFFERVFLPTVGQKRPILLIYDGHSTHVGINIIEKAREADITILKIPPHTSDNLQPLDLAVNKSFKDKWDLNLVKWQRLNVGQALPKKDFSKLIGKVWAEVDPKVCAAGFRKAAIFPFNANAVAEEKFHPDQLLEWKKQQHTELSETVCASPDYLKNSNPQVQTTVIQAVPSTSYSEDLFIFPHETEIQSDNNMAFDTNMQSNILRPLPSLLSICLNNWNGHVEKLTTPEYEDTEIKVTSYNQCLATTFNKNLFEHPSPSQNVNETSQPVNYDAKYLKCVSLNYDIHNKIESNANKLSPVKIIIEDDRIVKYNITFEELLLQKIKAGTHHKKKRTKVAGGAEVITCEEVYNKQKQEKLKKFKQKENRREKKLQKEKIKNKKMRTSKRQSKVLLTDDSTGGSDYAEVEDQKEIKKVRKSQNYKKSQRKTKGDMKRKLRKKIKKQYWMTRQVKVILT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01534755; iTF_01534758;
- 90% Identity
- iTF_01534755; iTF_01534758;
- 80% Identity
- -