Basic Information

Insect: Mamestra brassicae
Gene Symbol: stc
Assembly: GCA_905163435.1
Location: LR990997.1:4591889-4612096[-]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.06 9.2e+02 0.7 1.2 2 10 661 669 661 669 0.93

2 12 5.7e-05 0.87 10.4 18.1 4 19 677 692 675 692 0.93

3 12 4.2e-07 0.0064 17.2 8.5 1 18 728 745 728 746 0.98

4 12 0.89 1.3e+04 -3.0 0.6 7 11 750 754 750 754 0.90

5 12 0.00037 5.6 7.8 14.8 1 19 787 805 787 805 0.98

6 12 2.3e-05 0.35 11.7 11.0 1 18 846 867 846 868 0.86

7 12 0.0051 77 4.2 7.4 1 11 908 918 908 919 0.95

8 12 0.13 1.9e+03 -0.3 0.2 4 10 923 929 922 931 0.92

9 12 9.4e-06 0.14 12.9 15.0 3 19 937 953 935 953 0.92

10 12 0.0006 9.1 7.2 9.6 10 18 1000 1008 997 1009 0.92

11 12 6.3e-08 0.00095 19.9 14.1 1 17 1045 1063 1045 1069 0.83

12 12 0.004 61 4.5 7.8 1 14 1075 1087 1075 1103 0.90

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.06	9.2e+02	0.7	1.2	2	10	661	669	661	669	0.93
2	12	5.7e-05	0.87	10.4	18.1	4	19	677	692	675	692	0.93
3	12	4.2e-07	0.0064	17.2	8.5	1	18	728	745	728	746	0.98
4	12	0.89	1.3e+04	-3.0	0.6	7	11	750	754	750	754	0.90
5	12	0.00037	5.6	7.8	14.8	1	19	787	805	787	805	0.98
6	12	2.3e-05	0.35	11.7	11.0	1	18	846	867	846	868	0.86
7	12	0.0051	77	4.2	7.4	1	11	908	918	908	919	0.95
8	12	0.13	1.9e+03	-0.3	0.2	4	10	923	929	922	931	0.92
9	12	9.4e-06	0.14	12.9	15.0	3	19	937	953	935	953	0.92
10	12	0.0006	9.1	7.2	9.6	10	18	1000	1008	997	1009	0.92
11	12	6.3e-08	0.00095	19.9	14.1	1	17	1045	1063	1045	1069	0.83
12	12	0.004	61	4.5	7.8	1	14	1075	1087	1075	1103	0.90

Sequence Information

Coding Sequence: ATGTCTCAGTGGAATAACACATACGCTTACAACAACCAGTACCAAGGCTGGAACGGCGACCCAAACGTCCAATATGTGAACCAAGCCTACTATCCCAATAGACCAGAGCAAGCAAATCAGTATGTGAGCTTTAATGAGTTTCTTTCTCAAATGCAAAACAGTGGTGCCCCCAGTGCTAGCAACTATAGCAATGTACAATATGAAAACTATCCTGCAAGGCAATATAATTACCAGAATGTACCCTCCACTGCTCAAAACCCTCAGTTAGAAAGTTATGGATATGCAGGAACTACAGGCAATGTGTCCAGTGGCACTGAAGCATACCCATTGAATGTACAAAGTCAATACAACCCAGTGGTAGCCAATCCTAATGCCTACACAAATGCAATGATACTCAAATCTAATCTCACTCCAACAGCTACAGAATTTGTGCCAAAAGGTTCCATGATGACACCTACTACTAGCACTCAGAACATTCCTGAATCTAGTACTGTGCATGATGATAGTGAATCTAGAAATAATTATAGTAATGTAAATGAACCTAGGAACCATAATAGTAATACTAATGATTCACGAAATAACTACCCTAATATAAATGAACCAAGAAATACTAGTGGTAGTTCATCAGACACAAACTGGAGAGAAAGATCCCAAAGCTCCCAACAAAGTACTGAAACAAGCCAGAAAACTGAATCATACCAACATCCCCAAGAGCACCCTAAGAAACAAGAATCGAATGGTCGGCACCGTGAGACTAAGTATCGCAATAATGAGTCTAATGGGCGTCATCATGATTCAAACAATCGCAATCAGGATTTAAACAACCGTAATCAAGAATCAAACAATCGTAATCAAGAACCAGATAGTAGACCTTATGAATCAAGTAGTCATCAACAAGATTCTAGCAGTCGGAACTATGAATCTAACAACCGTAACtacgattcaaataacaaaagagGCCAAGGAAAAGGAAATTACAAGTCAAAGAACAAAGATGATGCTCGCACCTTCTACAATAGTGCAATTAGTAAGGACAGTCAGGATGTGCGGAACGGGAGAGGAGAAGCTTCAGGACGTGGAAAGAATTGGGTTGGAACACCACGACTTAGAGCAATGGATCGCAATAGCACAGAAGATGCAGAATATGCCAACACTTATTTGCAAGGCAGAGAGGAGAGGATGGAAAGAGATAATAGGGACAGAGATAGCGAAAATCGAGATCGGGACATAGACAGGGGAAGGGACACCCGTGATAAGCATAGGGATAGCCGAGATACCTATGAAAGAGATTACCGGGATGTCCGTGACACAGATAGAGATAACAGAGACGTTCGTGAGAGAGACAGAGGTAACCGAGACAACCGAGAGAAGGATAGAGATAGCCGCGATAGGGGTAGAGATTACCGTGACGTTCGTGAGAGAGATAGAGACAACAGAGATATACGAGAAAGGGATCGAGATTACCGAGACAACCGTGAGAGGGATAGGGACAACAGAGATATACGTGAGATGGATAGAGATTACCGTGATGGTCGTGATATGGATAGAGATAGCCGTGATATTCGTGAAAGGGACAGAGGAAACCGAGATATTCGAGAAAGGGAAAGGGACACTAGAGATAGGGAGAGAGCAATTAAGTCTGAGAATGTTCCCAGTCCTGCTCGAAACAAACCTAAATATGGCAATGATCAAGTAAACAAGGAAATGACTCAACGTGAGCGTCTAACTGAACAACTAGATAAAGGCACATTGGAGTGCCTTGTGTGCTGCGACAGAGTCAAACAATTTGAGCAGGTGTGGTCTTGCTGCAACTGTTACCATGTGCTGCATCTGAGGTGTATCCGGAAGTGGGCTATGAGCAGTATGGTTGAGGGCAAATGGCGCTGCCCAGCCTGTCAGAACACGAACGAAGCCATCCCCGCTGAGTACCGCTGCATGTGCGGCGCGGTGCGCGCGCCGGAGTACCAGCGCGGCTCCATAGGCGCGCATACATGTGGGCGCGCCTGTCGCCGCTCGCGCGCGTGCCCGCATCCCTGCACGCTGCTGTGCCACCCCGGACCCTGCCCGCCGTGCCAGGCTACTGTTGTAAAACCTTGCGGTTGCGGCACTGAAACGCGCTCCATACTGTGCAGCAGCAAGTTGCCGCAAGTGTGCGGCCGGGTGTGTGGACGTACCCTGCTGTGCGGGGTGCACAGCTGTGCCAAGGACTGCCACGAGGGAGCCTGCGACATCTGCGCCGAGACCGTCGAACAAGTGTGCCACTGCCCCGCCGCCAAGTCGCGCTCAGTGGCGTGCACGGCGGAGACGGGCACGTGCACGAGCTGGTCGTGCGGCGACACGTGCGGCCGCGTGTTGGCATGCGGCGCGCACGTGTGTCGCGCGCACTGCCACGCATCGCCCTGCCAGCCCTGCCAACTGCTGCCGCAGTACGTGCAGAGCTGTCCTTGTGGGAACACGCAGTTGGCGAAAGATTCGCGCAAGGCGTGCACCGACCCGATCCCGTTGTGCGGCAACATCTGCGCCAAGCCGCTGCAGTGCGGGCCCGCCGGAGACAAACACTTCTGCAAACTTAACTGTCATGAAGGCCCCTGCCCCGAATGTCTTGATAAGACTGTTCTTCAATGCCGCTGCGGCCACTCCAGCCGCGAGGTGCCCTGCGCCGACCTGCCTGAGATGTACAACAATGTGCTGTGCCAAAAGAAGTGCAATAAGAAACTGTCGTGCGGCCGTCACCGCTGCCGCACAGTGTGTTGCGCGGCGACGTCGCACCGCTGCGCCGTCATCTGCGGCCGCATGCTCTCGTGCCAGACGCACCGCTGCGAAGAGTTCTGTCACACGGGACACTGCGCGCCCTGCCCTCGCGTCAGTTTTGACGAGCTGACCTGTGAATGTGGAGCCGAAGTGATCCTGCCTCCCGTCCGCTGTGGGGCCCGGCCTCCTGCCTGCAGCGCGCCCTGCATCAGAGAGAGACCCTGCAAGCACCCCCCGCACCACTCCTGTCACTCTGGAGACTGTCCGCCCTGTGTAGTGCTGACTACCAAGCGTTGCCATGGCGACCACGAGGAAAGAAAGACAATACCGTGTTCTCAAGAGGAGTTTTCGTGCGGTCTTCCGTGCGGAAAGCCGCTGCCCTGCGGCAAGCATACCTGTATCAAGACCTGTCACAAGGGACCCTGTGACACTGGCAAATGCACGCAGCCGTGCACAGAGAAGCGTCCCTCGTGCGGTCACCCGTGCGCGGCGGCGTGCCACGTGGGCGCCGGCACGGAGGGCAGCGTGACGCCGTGCCCCAGCGCCGCGCCGTGCCGCCGCCCCGTGCGCGCCACGTGCCCGTGCGGCCGCCGCCACGCCGACCGGCCTTGCTGTGATAACGCCAGGGACTATGCTAAGATGATGAGCGCTCTAGCCGCCACCAAGATGTCTGAAGGTGGCTCAGTAGACTTGTCTGATGTACACCGCCCCAGCAGTATGCTCAAAAcCCTCGAATGCGACGACGAGTGCCGCGTGGAAGCCCGTACCCGTCAGCTGGCGCTGGCGCTTCAGATCCGCAACCCTGACGTGTCCGCCAAGCTGGCGCCGCGCTACAGCGAGCACGTGCGCTCCACCGCCGCGCGCGAGCCTGCCTTCGCGCACCAGATACACGACAAGCTCACCGAGCTCGTGCAGCTCGCTAAGAAGTCAAAACAGAAGACTCGTGCGCACTCCTTCCCGTCGATGAACTGGCAGAAGCGTCAGTTTATTCACGAGCTTTGCGAGCACTTCGGCTGCGAGAGCGTCGCCTACGATGCCGAGCCCAACCGCAACGTTGTGGCTACCGCTGATAAAGAAAAGTCATGGCTGCCGGCCATGAGCGTGCTGGAGGTGCTGGCGCGCGAGGCGGGCAAGCGGCGCGTGCCGGGGCCCGTgctgcgcgcgccgccgcacgccgccACAGGCTCCACGCTCATCAACAGCAACAGCGCGCAGGGAGGGACTAGCTCCAACACCAAGTACGTACTCTATATACACATCCCCACCATGAGCGTGCTGGAGGTGCTGGCGCGCGAGGCGGGCAAGCGGCGCGTGCCGGGGCCCGTgctgcgcgcgccgccgcacgccgccACAGGCTCCACGCTCATCAACAGCAACAGCGCGCAGGGAGGGACTAGCTCCAACACCAAGTACGTACTCTATATACACATCCCCACCATGAGCGTGCTGGAGGTGCTGGTACGCGAGGCGGGCAAGCGGCGCGTGCCGGGGCCCGTgctgcgcgcgccgccgcacgccgccACAGGCTCCACGCTCATCAACAGCAACAGCGCGCAGGGAGGGACTAGCTCCAACACCAAGTACGTACTCTATATACACATCCCCACCATGAGCGTGCTGGAGGTGCTGGCGCGCGAGGCGGGCAAGCGGCGCGTGCCGGGGCCCGTgctgcgcgcgccgccgcacgccgccACAGGCTCCACGCTCATCAACAGCAACAGCGCGCAGGGAGGGACTAGCTCCAACACCAAGTACGTACTCTATATACACATCCCCACCATGAGCGTGCTGGAGGTGCTGGCGCGCGAGGCGGGCAAGCGGCGCGTGCCGGGGCCCGTgctgcgcgcgccgccgcacgccgccACAGGCTCCACGCTCATCAACAGCAACAGCGCGCAGGGAGGGACTAGCTCCAACACCAAGTACGTACTCTATATACACATCCCCACCATGAGCGTGCTGGAGGTGCTGGCGCGCGAGGCGGGCAAGCGGCGCGTGCCGGGGCCCGTgctgcgcgcgccgccgcacgccgccACAGGCTCCACGCTCATCAACAGCAACAGCGCGCAGGGAGGGACTAGCTCCAACACCAAGTACGTACTCTATATACACATCCCCACCATGAGCGTGCTGGAGGTGCTGGCGCGCGAGGCGGGCAAGCGGCGCGTGCCGGGGCCCGTgctgcgcgcgccgccgcacgccgccACAGGCTCCACGCTCATCAACAGCAACAGCGCGCAGGGAGGGACTAGCTCCAACACCAAGTACGTACTCTATATACACATCCCCACCATGAGCGTGCTGGAGGTGCTGGCGCGCGAGGCGGGCAAGCGGCGCGTGCCGGGGCCCGTgctgcgcgcgccgccgcacgccgccACAGGCTCCACGCTCATCAACAGCAACAGCGCGCAGGGAGGGACTAGCTCCAACACCAAGTACGTACTCTATATACACATCCCCACCATGAGCGTGCTGGAGGTGCTGGCGCGCGAGGCGGGCAAGCGGCGCGTGCCGGGGCCCGTgctgcgcgcgccgccgcacgccgccACAGGCTCCACGCTCATCAACAGCAACAGCGCGCAGGGAGGGACTAGCTCCAACACCAAATCGGGCTGGGCAACCCTTACCTCAACGAACGCCTGGGCTGCCCGCAGCCAACCGAAGCCTGCGCAACCGCAACAGCAACCAACGGCTGAGAAGATTGACTATTTCGACAACCCGCCCGACAACTAG
Protein Sequence: MSQWNNTYAYNNQYQGWNGDPNVQYVNQAYYPNRPEQANQYVSFNEFLSQMQNSGAPSASNYSNVQYENYPARQYNYQNVPSTAQNPQLESYGYAGTTGNVSSGTEAYPLNVQSQYNPVVANPNAYTNAMILKSNLTPTATEFVPKGSMMTPTTSTQNIPESSTVHDDSESRNNYSNVNEPRNHNSNTNDSRNNYPNINEPRNTSGSSSDTNWRERSQSSQQSTETSQKTESYQHPQEHPKKQESNGRHRETKYRNNESNGRHHDSNNRNQDLNNRNQESNNRNQEPDSRPYESSSHQQDSSSRNYESNNRNYDSNNKRGQGKGNYKSKNKDDARTFYNSAISKDSQDVRNGRGEASGRGKNWVGTPRLRAMDRNSTEDAEYANTYLQGREERMERDNRDRDSENRDRDIDRGRDTRDKHRDSRDTYERDYRDVRDTDRDNRDVRERDRGNRDNREKDRDSRDRGRDYRDVRERDRDNRDIRERDRDYRDNRERDRDNRDIREMDRDYRDGRDMDRDSRDIRERDRGNRDIRERERDTRDRERAIKSENVPSPARNKPKYGNDQVNKEMTQRERLTEQLDKGTLECLVCCDRVKQFEQVWSCCNCYHVLHLRCIRKWAMSSMVEGKWRCPACQNTNEAIPAEYRCMCGAVRAPEYQRGSIGAHTCGRACRRSRACPHPCTLLCHPGPCPPCQATVVKPCGCGTETRSILCSSKLPQVCGRVCGRTLLCGVHSCAKDCHEGACDICAETVEQVCHCPAAKSRSVACTAETGTCTSWSCGDTCGRVLACGAHVCRAHCHASPCQPCQLLPQYVQSCPCGNTQLAKDSRKACTDPIPLCGNICAKPLQCGPAGDKHFCKLNCHEGPCPECLDKTVLQCRCGHSSREVPCADLPEMYNNVLCQKKCNKKLSCGRHRCRTVCCAATSHRCAVICGRMLSCQTHRCEEFCHTGHCAPCPRVSFDELTCECGAEVILPPVRCGARPPACSAPCIRERPCKHPPHHSCHSGDCPPCVVLTTKRCHGDHEERKTIPCSQEEFSCGLPCGKPLPCGKHTCIKTCHKGPCDTGKCTQPCTEKRPSCGHPCAAACHVGAGTEGSVTPCPSAAPCRRPVRATCPCGRRHADRPCCDNARDYAKMMSALAATKMSEGGSVDLSDVHRPSSMLKTLECDDECRVEARTRQLALALQIRNPDVSAKLAPRYSEHVRSTAAREPAFAHQIHDKLTELVQLAKKSKQKTRAHSFPSMNWQKRQFIHELCEHFGCESVAYDAEPNRNVVATADKEKSWLPAMSVLEVLAREAGKRRVPGPVLRAPPHAATGSTLINSNSAQGGTSSNTKYVLYIHIPTMSVLEVLAREAGKRRVPGPVLRAPPHAATGSTLINSNSAQGGTSSNTKYVLYIHIPTMSVLEVLVREAGKRRVPGPVLRAPPHAATGSTLINSNSAQGGTSSNTKYVLYIHIPTMSVLEVLAREAGKRRVPGPVLRAPPHAATGSTLINSNSAQGGTSSNTKYVLYIHIPTMSVLEVLAREAGKRRVPGPVLRAPPHAATGSTLINSNSAQGGTSSNTKYVLYIHIPTMSVLEVLAREAGKRRVPGPVLRAPPHAATGSTLINSNSAQGGTSSNTKYVLYIHIPTMSVLEVLAREAGKRRVPGPVLRAPPHAATGSTLINSNSAQGGTSSNTKYVLYIHIPTMSVLEVLAREAGKRRVPGPVLRAPPHAATGSTLINSNSAQGGTSSNTKYVLYIHIPTMSVLEVLAREAGKRRVPGPVLRAPPHAATGSTLINSNSAQGGTSSNTKSGWATLTSTNAWAARSQPKPAQPQQQPTAEKIDYFDNPPDN*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00772563;
90% Identity: -
80% Identity: -