Basic Information

Gene Symbol
stc
Assembly
GCA_905332915.1
Location
HG995295.1:4950284-4967250[-]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 12 0.056 1.1e+03 0.8 1.2 2 10 659 667 659 667 0.93
2 12 5.3e-05 1 10.5 18.1 4 19 675 690 673 690 0.93
3 12 2.6e-07 0.005 17.9 10.3 1 18 726 743 726 744 0.98
4 12 1.5 2.8e+04 -3.7 0.4 7 11 748 752 748 752 0.89
5 12 0.0034 65 4.7 14.7 1 19 785 803 785 803 0.98
6 12 2.6e-05 0.49 11.5 12.7 1 19 844 866 844 866 0.87
7 12 0.00087 17 6.6 5.3 1 11 906 916 906 919 0.93
8 12 0.061 1.2e+03 0.7 0.3 4 10 921 927 920 928 0.93
9 12 8.3e-06 0.16 13.1 14.4 3 19 935 951 933 951 0.92
10 12 0.00056 11 7.2 9.6 10 18 998 1006 995 1007 0.92
11 12 5.7e-08 0.0011 20.0 14.0 1 17 1043 1061 1043 1067 0.83
12 12 0.0038 72 4.6 7.8 1 14 1073 1085 1073 1101 0.90

Sequence Information

Coding Sequence
ATGTCTCAGTGGAACAACACATACTCTTACAACAACCAGTACCAAGCCTGGAATGGCGACCCAAACGTCCAATATGTGAACCAAGCCTACTATCCCAATAGACCAGAGCAAGCTAATCAGTATGTGAGCTTTAATGAGTTTCTTTCTCAAATGCAAAACAGTGGTGCGCCCAGTTCTAGTAACTATAGTAATGTACAATATGAAAACTATCCTGCAAGGCAATATAATTACCAGAATGTACCCTCCAGTGCTCAAAACCCTCAGTTAGACAATTATGGATATGCAGGAGCCACAGGGAATGTCTCCAGTGGCGCTGAAGCATACCCAGTGAATGTACAAAGTCAATATAACCCAGTGGCAGCCAATACTAATGCTTATACAAATGCAATGATACTCAAATCTAATCTCACTCCAACAGCTACTGAATTTGTGCCAAAAGGTTCTATGATGACACCTTCTACTAGCACTCAGAACATTCCTGAATCTAGTGCTGTGCATGATGATAGTGAATCTAGAAATAATTATAGTAATGTAAATGAACCTAGGAACCATTATAGTAGTATGAATGATTCACGAAATAACTACCCTAATATAAATGAACCAAGAAATATTAGTGGTAGTTCTTCAGACACCAATTGGAGAGAAAGATCCCAAAGCTCCCAACACAGTACTGAATCAAGCCAGAAATCTGAATCATACCAACATCCCCAAGAGCACCCTAAGAAACAAGAATCAAATGGTCGGCACCGTGAGACTAAGTATCGCAATACTGAGTCCAACGGGCGCCATCATGATTCAAACAATCGCAATCAGGATTCAAATAACCGTAATCAAGAATCAAACAATCGTAATCAAGAACCAGAAAGTAAACATGAATCAAACAATCATCTACAGGATTCTAGCAGTCGGAACTATGAATCTAACAACCGTAACTATGATTCAAGTAACAAAAGAGGCCAAGGAAAAGGGAATTACAAGTCAAAGAATAAAGATGATGCTCGCACCTTCTACAATAGTGCAATTAGTAAGGACAGTCAAGATGTGCGTAATGGGAGAGGCGAAGCTTCAGGGCGTGGAAAGAATTGGGTTGGAACACCACGGCTTAGAGCAATGGATCGCAATAGCACAGATGATGCAGAATATGCCAACACTTATTTGCAAGGCAGAGAAGAAAGGATGGAAAGAGATTacagggacagagaaagcgaaaACCGCGAGAGGGACATAGACAGGGGAATGGATACCCGTGATAAACATAGGGATAGCCGAGATACCTATGAAAGAGAAAGAGATTACCGAGACATCCGTGAGACAGATAGAGATGTccgtgagagagagagaggtaaGCGAGACATTCGTGAGAAAGACAGAGACAGCCGCGATAGGGGTAGGGATTACCGTGATGTCCGTGAGAGAGATAGAGACAACAGAGACATAAAAGAAAGGGATAGAGACTACCGAGACAACCGTGAGAGGGATAGGGACAACAGAGATATACGTGAGATGGATAGAGATTACCGTGATGGCTATGACATGGATAGAGATAGCCGTGGTATTCGTGAACGTGACCGAGGTAACAGGGATATTCGAGAAAGGGAAAGGGATCCTAGAGACAGGGAGAGAGCAATTAAGTCTGAGAATGTTTCCAGTCCTGCTCGAACCAAAACCAGATATGGTAATGATCAAGTTAACAAAGAGATGACTCAACGTGAACGCCTAACTGAACAACTAGATAAAGGCACTTTGGAATGCCTTGTGTGTTGCGACAGAGTCAAACAATTTGACCAGGTGTGGTCTTGCTGCAACTGTTACCATGTGCTTCATCTGAGGTGCATACGGAAGTGGGCCATGAGCAGTATGGTTGAGGGCAAATGGCGCTGCCCGGCCTGCCAGAACACAAACGAAGCCATCCCCACGGAGTACCGCTGCATGTGCGGAGCGGTGCGCGCGCCGGAGTACCAGCGTGGTTCCACGGGCGCTCATACATGTGGGCGCGCCTGTCGCCGCCCGCGCGCGTGCCCGCACCCCTGCACGCTGCTGTGCCACCCCGGACCCTGCCCGCCGTGCCAGGCTACCGTTGTCAAACCTTGCGGTTGCGGCGCTGAGACCCGCTCGATACTGTGCAGCAGCAAGTTACCGCAAATGTGCGGCCGCGTGTGTGGCCGCACCCTGCTGTGTGGCGTGCACAGCTGTGCCAAGGACTGCCATGAGGGACCCTGCGACATCTGCGCCGAGACCGTCGAACAAATATGCCACTGCCCCGCCGCCAAGTCGCGCTCAGTGGCGTGCACGGCGGAGACGGGCACGTGCACGAGCTGGTCGTGCGGCGACACGTGCGGCCGCGTGCTGGCGTGCGGCGCGCACGTGTGCCGCGCGCACTGCCACGCGCCGCCCTGCGCGCCCTGCCAGCTGCTGCCGCAGTACGTGCAGAGCTGTCCTTGTGGGAACACGCAGTTGGCGAAAGACTCACGCAAGGCGTGCACGGACCCGATCCCGTTGTGCGGCAACATCTGCGCCAAGCCGCTGCAGTGCGGCCCAGCCGGAGACAAACACTTCTGCAAACTTAACTGTCATGAAGgcCCCTGCCCCGAATGCCCCGATAAGACTGTACTTCAGTGCCGCTGTGGCCACTCCAGCCGCGAGGTGCCCTGCGCCGACCTGCCTCAGATGTACAACAACGTGCTGTGCCAAAAGAAGTGCAATAAGAAACTGTCGTGCGGGCGCCACCGCTGCCGCACGGTGTGCTGCGCGGCGCCGTCGCACCGCTGCGCCGTGGTGTGCGGCCGCACGCTGTCGTGCCAGGCGCACCGCTGCGAGGAGTTCTGCCACACGGGCCACTGCGCGCCCTGCCCGCGCGTCAGTTTTGACGAGCTGACCTGTGAATGTGGAGCCGAAGTAATCCTGCCTCCCGTCCGCTGTGGGGCCCGGCCTCCTGCCTGCAGCGCGCCTTGCATCAGAGAGAGACCCTGCAAGCACCCCCCGCACCACTCCTGCCACTCTGGAGACTGTCCGCCCTGTGTAGTGCTGACTACAAAGCGTTGCCATGGCGACCACGAGGAAAGAAAGACAATACCGTGTTCTCAAGAGGAGTTCTCGTGCGGCCTTCCGTGCGGGAAGCCGCTGCCTTGCGGCAAGCACACCTGTATCAAGACCTGTCACAAGGGACCCTGTGACACCGGCAAATGCACACAGCCGTGCACAGAGAAGCGTCCGTCGTGCGGGCACCCGTGTGCAGCCGCGTGCCACGTGGGCGCGGGCACGGAGGGCAGCGTGACGCCGTGCCCCAGCGCCGCGCCGTGCCGCCGCCCCGTGCGCGCCACGTGCCCGTGCGGCCGCCGCCACGCCGACCGGCCTTGCTGTGATAACGCCAGGGACTATGCTAAGATGATGAGCGCCCTAGCCGCCACCAAGATGTCAGAAGGTGGCTCAGTAGACCTGTCTGATGTTCAGCGCCCCGGCAGTATGCTCAAAACGCTGGAGTGCGACGACGAGTGCCGCGTGGAGGCGCGCACGCGGcagctggcgctggcgctgcagATCCGCAACCCCGACGTGTCCGCCAAGCTGGCGCCGCGCTACAGCGACCACGTGCGCGCCACCGCCGCGCGCGAGCCCGCCTTCGCGCACCAGATACACGACAAGCTCACCGAGCTCGTGCAGCTTgctaaaaagTCAAAACAGAAGACTCGAGCGCACTCCTTCCCGTCGATGAACTGGCAGAAGCGTCAATTCATTCACGAGCTGTGCGAGCACTTCGGCTGCGAGAGCGTCGCCTACGATGCCGAACCCAACCGGAACGTCGTGGCCACCGCTGATAGAGAAAAGTCGTGGCTGCCGGCGATGAGCGTGCTGGAGGTGCTGGCGCGCGAGGCGGGCAAGCGGCGCGTGCCGGGGCCCGTGCtgcgcgcgccgccgcacgcCGCCACAGGCTCCACGCTCATCAACAGCAACAGCGCGCAGGGAGGGACTAGCTCCAACACCAAGTACGTACTGTATATACACAGCCCCACCATGAGCGTGCTGGAGGTGCTGGCGCGCGAGGCGGGCAAGCGGCGCGTGCCGGGGCCCGTGCtgcgcgcgccgccgcacgcCGCCACAGGCTCCACGCTCATCAACAGCAACAGCGCGCAGGGAGGGACTAGCTCCAACACCAAGTACGTACTGTATATACACAGCCCCACCATGAGCGTGCTGGAGGTGCTGGCGCGCGAGGCGGGCAAGCGGCGCGTGCCGGGGCCCGTGCtgcgcgcgccgccgcacgcCGCCACAGGCTCCACGCTCATCAACAGCAACAGCGCGCAGGGAGGGACTAGCTCCAACACCAAGTACGTACTGTATATACACAGCCCCACCATGAGCGTGCTGGAGGTGCTGGCGCGCGAGGCGGGCAAGCGGCGCGTGCCGGGGCCCGTGCtgcgcgcgccgccgcacgcCGCCACAGGCTCCACGCTCATCAACAGCAACAGCGCGCAGGGAGGGACTAGCTCCAACACCAAGTACGTACTGTATATACACAGCCCCACCATGAGCGTGCTGGAGGTGCTGGCGCGCGAGGCGGGCAAGCGGCGCGTGCCGGGGCCCGTGCtgcgcgcgccgccgcacgcCGCCACAGGCTCCACGCTCATCAACAGCAACAGCGCGCAGGGAGGGACTAGCTCCAACACCAAGTACGTACTGTATATACACAGCCCCACCATGAGCGTGCTGGAGGTGCTGGCGCGCGAGGCGGGCAAGCGGCTCGTGCCGGGGCCCGTGCtgcccgcgccgccgcacgcCGCCACAGGCTCCACGCTCATCAACAGCAACAGCGCGCAGGGAGGGACTAGCTCCAACACCAAGTACGTACTGTATATACACAGCCCCACCATGAGCGTGCTGGAGGTGCTGGCGCGCGAGGCGGCAAGCGATATTGAGTTCTgcaaattcaatttaaataccGAATCTTTATCGCCTGACAAGATGCGGTTCCAAGCTTCTATTCTCCCACCCCACCCACTATTCTACCCTTTATTCTACCACAGATCGGGCTGGGCAACCCTTACCTCAACGAACGCCTGGGCCGCCCGCAGCCAACCGAAGGCTGCACAACCGCAACAGCAACCAACAGCTGAGAAAATCGACTATTTCGACAACCCACCGGACAACTAG
Protein Sequence
MSQWNNTYSYNNQYQAWNGDPNVQYVNQAYYPNRPEQANQYVSFNEFLSQMQNSGAPSSSNYSNVQYENYPARQYNYQNVPSSAQNPQLDNYGYAGATGNVSSGAEAYPVNVQSQYNPVAANTNAYTNAMILKSNLTPTATEFVPKGSMMTPSTSTQNIPESSAVHDDSESRNNYSNVNEPRNHYSSMNDSRNNYPNINEPRNISGSSSDTNWRERSQSSQHSTESSQKSESYQHPQEHPKKQESNGRHRETKYRNTESNGRHHDSNNRNQDSNNRNQESNNRNQEPESKHESNNHLQDSSSRNYESNNRNYDSSNKRGQGKGNYKSKNKDDARTFYNSAISKDSQDVRNGRGEASGRGKNWVGTPRLRAMDRNSTDDAEYANTYLQGREERMERDYRDRESENRERDIDRGMDTRDKHRDSRDTYERERDYRDIRETDRDVRERERGKRDIREKDRDSRDRGRDYRDVRERDRDNRDIKERDRDYRDNRERDRDNRDIREMDRDYRDGYDMDRDSRGIRERDRGNRDIRERERDPRDRERAIKSENVSSPARTKTRYGNDQVNKEMTQRERLTEQLDKGTLECLVCCDRVKQFDQVWSCCNCYHVLHLRCIRKWAMSSMVEGKWRCPACQNTNEAIPTEYRCMCGAVRAPEYQRGSTGAHTCGRACRRPRACPHPCTLLCHPGPCPPCQATVVKPCGCGAETRSILCSSKLPQMCGRVCGRTLLCGVHSCAKDCHEGPCDICAETVEQICHCPAAKSRSVACTAETGTCTSWSCGDTCGRVLACGAHVCRAHCHAPPCAPCQLLPQYVQSCPCGNTQLAKDSRKACTDPIPLCGNICAKPLQCGPAGDKHFCKLNCHEGPCPECPDKTVLQCRCGHSSREVPCADLPQMYNNVLCQKKCNKKLSCGRHRCRTVCCAAPSHRCAVVCGRTLSCQAHRCEEFCHTGHCAPCPRVSFDELTCECGAEVILPPVRCGARPPACSAPCIRERPCKHPPHHSCHSGDCPPCVVLTTKRCHGDHEERKTIPCSQEEFSCGLPCGKPLPCGKHTCIKTCHKGPCDTGKCTQPCTEKRPSCGHPCAAACHVGAGTEGSVTPCPSAAPCRRPVRATCPCGRRHADRPCCDNARDYAKMMSALAATKMSEGGSVDLSDVQRPGSMLKTLECDDECRVEARTRQLALALQIRNPDVSAKLAPRYSDHVRATAAREPAFAHQIHDKLTELVQLAKKSKQKTRAHSFPSMNWQKRQFIHELCEHFGCESVAYDAEPNRNVVATADREKSWLPAMSVLEVLAREAGKRRVPGPVLRAPPHAATGSTLINSNSAQGGTSSNTKYVLYIHSPTMSVLEVLAREAGKRRVPGPVLRAPPHAATGSTLINSNSAQGGTSSNTKYVLYIHSPTMSVLEVLAREAGKRRVPGPVLRAPPHAATGSTLINSNSAQGGTSSNTKYVLYIHSPTMSVLEVLAREAGKRRVPGPVLRAPPHAATGSTLINSNSAQGGTSSNTKYVLYIHSPTMSVLEVLAREAGKRRVPGPVLRAPPHAATGSTLINSNSAQGGTSSNTKYVLYIHSPTMSVLEVLAREAGKRLVPGPVLPAPPHAATGSTLINSNSAQGGTSSNTKYVLYIHSPTMSVLEVLAREAASDIEFCKFNLNTESLSPDKMRFQASILPPHPLFYPLFYHRSGWATLTSTNAWAARSQPKAAQPQQQPTAEKIDYFDNPPDN*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00952393;
90% Identity
-
80% Identity
-