Mbra001587.1
Basic Information
- Insect
- Mamestra brassicae
- Gene Symbol
- clz9
- Assembly
- GCA_905163435.1
- Location
- LR990987.1:30277464-30279596[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.3e-07 9e-05 22.8 0.0 4 39 19 55 16 58 0.85
Sequence Information
- Coding Sequence
- atgGTCAGGAATTACAAGAAAAAGGGTACTAGGAGTGGAGAGGTAGACGAAGTGGCAATATCAAAAGCTATCGATGAAGTCATACTAAACAAAGTCTCTTTAAGAAAATCAGCAGCCAAGTACGGAGTAAATCCACAAACTTTACAAAGCCGTCTCAAAAAGTTACGAACACGAGATCTACTTAGCGAAAATCGTGTTTTCGATTCTAAATTTGCATCGCAGcaagttttaacaaaaatagaagaagaacacttaaataaatacatcttAGAGTGTTCCAAAATGCACTATGGACTAACATGTGTCCAAGTTAAAAAACTGGCATATGAATTCGCTAAGGCCAATGAACTCAAATATCCAGCAAGTTGGGATAGAAACAAGATGGCGGGAGCAGATTGGTTAGCAAGTTTCCGAAAACGCCATAGGAATTTAAGTTTGCGTAAACCGGAAAATACCAGCGCTGCAAGATCATTCGGGTTTAATAAAACGGCAGTGAATGATTTCTTCCAGAACCTGGAGAATTTATACTGCAAGCACAATTTTACTCCCGATCGGATTTTTAACTACGACGAATCTGGTATATCTACTGTGCTGAGCACACCGAAAATTTTAGCTGACAAATCCCAAAAACAAGTTGGTCAAATAGTGTCTGCCGAAAGAGGAGAACTGGTGACATTTGGCGGTATTATTTTGGCCAGTGGAAACACCATACCACCTTTATTCATCTTCCCTCGGGTACATTTTAAGGACCACTTCATAGAAGGTGCTCCAGAAGGCTCTTTAGGTGTAGCTACGAGAAGTGGATGGATAAATTCGATCATTTTTGTTGATGTTCTAAAGCACATTCAAAAACACACCTTATCTTCCAAAGAAAATCCGATATTGCTCTTATTAGACAACCATGAAAGCCACACTTCTATTGATGCCATCAACTACTGCCGGAACAATGGCATAGTGTGCCTTTCCTTCCCACCTCACACGACTCACCGCCTTCAACCATTAGACGTTGGTGTATTTGGGCCacttaaatctaaattaaaaacatcattCAATGACTGGCACGTTTCTAACCCGGGTAAAACACTTAACATCTACAATATCCCAAAACTCACAAAGATACCTTATTTGGAATCATTTAATGCAAGGAATATCACTAGAGCATTTGAAAAAACCGGAATATGGCCTttcaataaattgatttttaatgatGAAGATTTTGCGCCAGTTCAAGTGTATCATTCTAATCCTGTAACGAATGGCAATGAAAATACAGCTGGTGAGGAGCAGCGTGGAATACCCGATAATGAGCTTGTTACAGTTAGTTATGAACTCGCAGAAGTCAGTGGTGATGTTCCTGCTCGAACACCGACGACTTTGTCCAGAGATGTTTCGCCTTCACTGCTTTCACAACCTCTTCTATTTATGGATTTCGATAAACCTACACCATCTACTTCCAAACTATTGAAGACTCCAGAAATGATAAGGCCTTTCCCGAAAGTCCAAAGACGCAAACAAACAAGAAATGGTCGATCACTTGGAAAATCAAGGATTTATACCGACACGCCTGAGAAGACTAGAATTGAAGATTTGGGAAAAATCAAAGAGATGAAGAGATTAGAAAAAGAACGAAAAAGTCGAGCAAGAGAAATGAAAAAAGCATTGAGTTTATTAAATGAAGATTATGACAGATCAAGTAAACCAAAAAGGAATAAAACCAAAGAGATTGAAACAAGTAGTAGCGACAGTGAAACAATCAGCCTGAGAGAAAGTTCTGCTTCACCTTTCGATGAACTTGAAGAAAACCAAGAAGAAGATGTTCGTGTAGAGCTTGTTGATCCTGAAAATGTCAAGGATGGGGCCTATGTCCTTGTTAAATTTGAGAAAAAGAAGTCTGTTATTTACTATGTCGGTCAAATAATCAAACACTACAGTTTGACAGAAGTAATGGTTTCATTTTTGAGGAAGAAACCAGGATCTTCTATGAAATTTGTATTTCCAGACGTCAAAGACGAAGGATCAGTAGATCTATCCGATATAGTTTTGATATTACCGGATCCTAAATCAGCTAAGACAGCTAGAACTGCtagtattttaagttttaacaaaGATCTCTCTTTTTATAACgtccattaa
- Protein Sequence
- MVRNYKKKGTRSGEVDEVAISKAIDEVILNKVSLRKSAAKYGVNPQTLQSRLKKLRTRDLLSENRVFDSKFASQQVLTKIEEEHLNKYILECSKMHYGLTCVQVKKLAYEFAKANELKYPASWDRNKMAGADWLASFRKRHRNLSLRKPENTSAARSFGFNKTAVNDFFQNLENLYCKHNFTPDRIFNYDESGISTVLSTPKILADKSQKQVGQIVSAERGELVTFGGIILASGNTIPPLFIFPRVHFKDHFIEGAPEGSLGVATRSGWINSIIFVDVLKHIQKHTLSSKENPILLLLDNHESHTSIDAINYCRNNGIVCLSFPPHTTHRLQPLDVGVFGPLKSKLKTSFNDWHVSNPGKTLNIYNIPKLTKIPYLESFNARNITRAFEKTGIWPFNKLIFNDEDFAPVQVYHSNPVTNGNENTAGEEQRGIPDNELVTVSYELAEVSGDVPARTPTTLSRDVSPSLLSQPLLFMDFDKPTPSTSKLLKTPEMIRPFPKVQRRKQTRNGRSLGKSRIYTDTPEKTRIEDLGKIKEMKRLEKERKSRAREMKKALSLLNEDYDRSSKPKRNKTKEIETSSSDSETISLRESSASPFDELEENQEEDVRVELVDPENVKDGAYVLVKFEKKKSVIYYVGQIIKHYSLTEVMVSFLRKKPGSSMKFVFPDVKDEGSVDLSDIVLILPDPKSAKTARTASILSFNKDLSFYNVH*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00357390;
- 90% Identity
- iTF_01118242; iTF_01118243; iTF_01118244; iTF_00123316; iTF_00973722; iTF_01363051; iTF_00449039; iTF_00123318; iTF_00906076; iTF_00951775; iTF_00357390; iTF_00357389;
- 80% Identity
- -