Mbra015745.1
Basic Information
- Insect
- Mamestra brassicae
- Gene Symbol
- -
- Assembly
- GCA_905163435.1
- Location
- LR991002.1:5783086-5783400[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.1e-13 2.4e-10 40.7 0.1 3 37 17 51 16 55 0.95 2 2 2.8 1.1e+03 0.1 0.0 9 20 51 62 51 62 0.84
Sequence Information
- Coding Sequence
- ATGGTGAGAACCTATAAAAAGAAAAGCTCAAGAGGCAGTTGGCCTGTAGAAAGCATGAAACGGGCAATCGATGCAGTTTTAAGCAAATCAGCAGGCTACAGAAAAGCTGCCCAGCTATACGGTGTTCCACAGACCACGTTGGAGCGTCACGTGGCCAAAATAAGGAAGGGTGAGCTCTCTCTTAACTCAACTCCAGGTAATTTTAAGCCCGTATTTTCCAAACAAGAGGAAGATGAGCTCGTGAAGTTTATTAAAGAAATGGAGAAACGTTTGTTTGGATTAACCACCGTCGTTCTCCGAAAACTTGCCTATTAG
- Protein Sequence
- MVRTYKKKSSRGSWPVESMKRAIDAVLSKSAGYRKAAQLYGVPQTTLERHVAKIRKGELSLNSTPGNFKPVFSKQEEDELVKFIKEMEKRLFGLTTVVLRKLAY*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00889117;
- 90% Identity
- -
- 80% Identity
- -