Lsal028448.1
Basic Information
- Insect
- Leucoma salicis
- Gene Symbol
- -
- Assembly
- GCA_948253155.1
- Location
- OX411821.1:6075429-6075740[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.5e-11 4.3e-08 33.5 0.1 3 37 17 51 15 58 0.93 2 2 1.2 5.5e+02 1.1 0.0 12 22 54 64 51 68 0.84
Sequence Information
- Coding Sequence
- ATGGTACGAACTTACAAAAAGAAAAGTTCCAGAGGCAGTTGGTCTGTAGAAAGCATGAAACACGCAATTGATGCAGTTTTAAGCAAATCGGCAGGTTACAGAAAAGCAGCTCAATTGCACGGTGTTCCACAGACCACATTGGAGCATCACGTCCCAAAAATAAGGAAGGGCAAGGTATCTCTTAATTCAGCCCCAGGTAACTTTAAACCCGTATTTTCCAAACAAGAAGAAGAGGAGCTTGTTAGGTATGTAAAAGATATAGAAAAACGATTATTTGGATTGACAACTATCGTCCTACGAAAACTAGCCTAA
- Protein Sequence
- MVRTYKKKSSRGSWSVESMKHAIDAVLSKSAGYRKAAQLHGVPQTTLEHHVPKIRKGKVSLNSAPGNFKPVFSKQEEEELVRYVKDIEKRLFGLTTIVLRKLA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00951718;
- 90% Identity
- -
- 80% Identity
- -