Mser010968.1
Basic Information
- Insect
- Malthinus seriepunctatus
- Gene Symbol
- Hr39_2
- Assembly
- GCA_963924605.1
- Location
- OZ004601.1:27488007-27490591[-]
Transcription Factor Domain
- TF Family
- SF-like
- Domain
- zf-C4|SF-like
- PFAM
- AnimalTFDB
- TF Group
- Zinc-Coordinating Group
- Description
- The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1.4 1.1e+04 -4.2 7.9 49 158 137 240 106 282 0.47 2 4 2.3e-08 0.00019 21.5 0.1 1 28 389 416 389 458 0.69 3 4 0.062 5.2e+02 0.2 0.0 78 118 440 479 414 505 0.56 4 4 1.1e-72 8.9e-69 233.3 0.0 204 408 517 716 508 716 0.97
Sequence Information
- Coding Sequence
- ATGGCCACAGATATGAGATCACCGAATGTGTCTATCACTCCCATTAACGTGGATCCCTATCCACCGACTTCACTATCCAACGGAGTTTTACCTAAACATCCCGAAGTCAGTACAGATTTACAACCGTCCAACGAATCTGCTAGTATTATAAATGGAGATGGTTTGGACAGTAGTTTGGATGCTGAAGTGGctcaaattgaatttaattcgACTTCTGTTAACTTACGACAGAAGAAACAGTGGGAAGAAAATGAAGCAGCTAGACCTATGTCTTGGGAAGGAGAATTATCGGATGGAGAACGAGATATGTGTGTCGACACAGACGACCGCTCACagCTACCCGAAAACCTTACGTTCATCCCAACTAAAACTCTTCCACCATCAGAATTAAAAGAaagtcctattttaagattaaaaCAGCCTACAACAGTCAACAATTATTCCATTCATAGCACTCCAAATAATTCTCCTCTGTTGAGCCAGAGACATGCAACCGGAGTGCCTCTTCTTAGTCATAAAGACATCATGCATAAAACCCTTCATGTACCACCCACACCGAGTCCAGACTCGGCAATTCATTCAGCTTATAGTGTGTTCAGTTCGCCAAGTCAAAGTCCCCTCACACAGAGACATTTAACTCCAAGTTTAAGTCGTAATAATAGTGATGCGTCGCATTCGAGCTGTTGTAGTTATTCGAGTGTTTCTGTTTCGGTTTCACCTACGCAACAGTTTTCACCTACTCATAGTCCCATACAGAGTCGTCATCATATTTTAGGTGGAATTCATAATAGTCCTTTACATCATAATGTATTGTACCGTAGCTTGCAAGAAGAATCAAATTTGCAATATCCACCTGAACAGGATGGTTTAGATGAGGTGGAAGATAAGACTGGTTTAATTCATGCATCTCTTCCTGCTCAACCTGGTATTTCTAGGCAACAGTTGATTAATAGccCGTGTCCGATATGTGGTGATAAAATATCAGGCTTTCATTATGGTATTTTTAGTTGTGAATCGTGTAAGGGATTTTTTAAACGTACTGTACAAAATAGAAAGAATTATGTGTGTCTGAGAGGTGCCGCTTGTCCTGTTACTATTGCAACTAGAAAAAAGTGTCCTGCTTGTAGATTTGATAAATGTTTACAATGCGGAATGAAACTGGAAGctATAAGAGAAGACAGAACAAGAGGAGGTAGATCTACTTATCAATGCTCATATTCTCTTCCTCCGTCGCTAGCTGGTCATCCAGAATTGAGGGCAAGTGCAACTGATATTCGTCAAAATTATGGTGATTCGAGTCAACAGGTTTTAAGAGTTAAACTCGAACCTACTGATTCAAACACTTTTTTAAAACGGTCTACGCTTGGAAATTCACGTTTAGGGGTCCCGCCACTATTGCAggaaataatgGATGTGGAACACCTATGGCACTATAACGAGTTGACCAATGATGGTCCATCTAATTTGGACAAAGCGAGTACAAGCACAACAGTACATAATTTATCTCAACACCCTTTGCTAGTCGGTACAGCTTTAGCAAACTCATCCGACACTAATCCTGATTTTGTGGCCAACTTGTGCAATGTAGCCGATCATCGAttatataaaatagtaaagtgGTGCAAAAGTTTgcctttgtttaaaaatatatctaTTGATGATCAAATTTGTTTGTTGATTAATTCGTGGTGCGAGCTGTTGTTATTTTCGTGTTGTTTTCGGTCGATGTCTACACCTGGGGAAATTCGAGTTTCGTTGGGAAAGAGCATCAACTTGGAGCAAGCGAAAGAAATGGGTTTGGGTGTTTGTATCGAACGAATGTTAAATTTTACAGATCATTTAAGAAGGTTGCGCGTCGATAAGTATGAATATGTTGCCATGAAAGTTATTGTACTACTTACTTCGGatacATCTGAGTTAAGAGAACCAGAAAAAGTTAGAGCGTCTCAAGAAAAGGCTTTGCAAGCCCTACAACATTACACTTTGGCACATTATCCAGATTCTCCTGCCAAATTTGGCGAACTTTTACTTAGAATACCTGAGCTTCAAAGAACATGTCAGgtgGGTAAGGAAATGTTAACGATAAAATCGAAGGACGGGGAAGGGCCAAGTTTTAACCTGCTCCTGGAGCTACTTCGAGGGGACCATTAG
- Protein Sequence
- MATDMRSPNVSITPINVDPYPPTSLSNGVLPKHPEVSTDLQPSNESASIINGDGLDSSLDAEVAQIEFNSTSVNLRQKKQWEENEAARPMSWEGELSDGERDMCVDTDDRSQLPENLTFIPTKTLPPSELKESPILRLKQPTTVNNYSIHSTPNNSPLLSQRHATGVPLLSHKDIMHKTLHVPPTPSPDSAIHSAYSVFSSPSQSPLTQRHLTPSLSRNNSDASHSSCCSYSSVSVSVSPTQQFSPTHSPIQSRHHILGGIHNSPLHHNVLYRSLQEESNLQYPPEQDGLDEVEDKTGLIHASLPAQPGISRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCLRGAACPVTIATRKKCPACRFDKCLQCGMKLEAIREDRTRGGRSTYQCSYSLPPSLAGHPELRASATDIRQNYGDSSQQVLRVKLEPTDSNTFLKRSTLGNSRLGVPPLLQEIMDVEHLWHYNELTNDGPSNLDKASTSTTVHNLSQHPLLVGTALANSSDTNPDFVANLCNVADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLLFSCCFRSMSTPGEIRVSLGKSINLEQAKEMGLGVCIERMLNFTDHLRRLRVDKYEYVAMKVIVLLTSDTSELREPEKVRASQEKALQALQHYTLAHYPDSPAKFGELLLRIPELQRTCQVGKEMLTIKSKDGEGPSFNLLLELLRGDH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00951009;
- 90% Identity
- iTF_00951009;
- 80% Identity
- iTF_00951009;