Basic Information

Insect: Malthinus flaveolus
Gene Symbol: -
Assembly: GCA_950108345.1
Location: OX467285.1:21252336-21255246[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 1.1e-05 0.00076 20.0 2.3 1 23 143 165 143 165 0.99

2 14 0.0017 0.11 13.2 5.8 2 23 172 193 172 193 0.98

3 14 3.4e-05 0.0023 18.5 3.3 1 23 203 225 203 225 0.97

4 14 0.00026 0.017 15.7 3.7 2 23 295 317 294 317 0.97

5 14 0.0014 0.094 13.4 5.6 1 23 387 409 387 409 0.96

6 14 2.3e-05 0.0015 19.0 0.7 1 23 415 438 415 438 0.95

7 14 1.6e-06 0.00011 22.6 1.1 1 23 443 465 443 465 0.98

8 14 5.8e-07 4e-05 24.0 2.5 2 23 475 496 474 496 0.97

9 14 3.4e-07 2.3e-05 24.8 1.2 1 23 503 525 503 525 0.97

10 14 2.3e-05 0.0016 19.0 1.6 3 23 537 557 535 557 0.92

11 14 0.0008 0.054 14.2 5.2 1 23 563 585 563 585 0.99

12 14 9.5e-06 0.00065 20.2 1.8 1 23 591 613 591 613 0.96

13 14 1.7e-07 1.2e-05 25.7 0.3 1 23 619 641 619 641 0.99

14 14 0.00037 0.025 15.2 0.1 1 23 647 671 647 671 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	1.1e-05	0.00076	20.0	2.3	1	23	143	165	143	165	0.99
2	14	0.0017	0.11	13.2	5.8	2	23	172	193	172	193	0.98
3	14	3.4e-05	0.0023	18.5	3.3	1	23	203	225	203	225	0.97
4	14	0.00026	0.017	15.7	3.7	2	23	295	317	294	317	0.97
5	14	0.0014	0.094	13.4	5.6	1	23	387	409	387	409	0.96
6	14	2.3e-05	0.0015	19.0	0.7	1	23	415	438	415	438	0.95
7	14	1.6e-06	0.00011	22.6	1.1	1	23	443	465	443	465	0.98
8	14	5.8e-07	4e-05	24.0	2.5	2	23	475	496	474	496	0.97
9	14	3.4e-07	2.3e-05	24.8	1.2	1	23	503	525	503	525	0.97
10	14	2.3e-05	0.0016	19.0	1.6	3	23	537	557	535	557	0.92
11	14	0.0008	0.054	14.2	5.2	1	23	563	585	563	585	0.99
12	14	9.5e-06	0.00065	20.2	1.8	1	23	591	613	591	613	0.96
13	14	1.7e-07	1.2e-05	25.7	0.3	1	23	619	641	619	641	0.99
14	14	0.00037	0.025	15.2	0.1	1	23	647	671	647	671	0.92

Sequence Information

Coding Sequence: ATGATGATTAGCAAAGAAACTGCAATGGttatgcaaaaaatttgtagatcATGTATGTGCGAAAGTGCCGAAATGCGTAGCGTGTTTTCCACCAAAGATGCTGAAGAAGGACAAACTTTAAACCTTGCTGATATGTTAATGGCTTGCACGTCTATTCAAATTACGCCAGACGATGGTTTACCTGTACAATTGTGTTTGACATGTGAGACTAAGCTAGATTCTGCATTTGAATTTAAGCAACAGTGTGAAAGAACCGATACAACTCTTCGTGAGCTTACAAATCAATCTGTACCTAAACGTTCAATTAAAGAAGAGTCTTATGATATTATAGTACAGCCCGACTTGGATCCTGCAGATTTATATGCTTCAGATTCCGACAGTAACCCCGAGACAAAAAAGATCAAGAGCCCGAAAGATCCCAACATTTTTACGTGCAGTTATTGTCAAAAGGTTTTAAGGACGAAGAAAGGGTTAAACATTCACCAAAGACGACATACTGGTGAAAAGTTACGAACTTGCCATCTTTGTCAAGCTAATTTTACTCGTACCAACCATCTGAGAAGACATCTGGAGACACATAATAGAAATAAACAGCCAATTACATCTCATACTTGTGGCGAATGTGGAGAAACATTTTCCAAAGCGTATCATTTagttaaacacaaaaaagaaCATAAGTTCGGTGGTATTAACGTTAAGAAAGAATCTTTCAACGATATGGATGACAACAATGAAGTCGACGAGCGAACAGATTTTGAAGGTGACGAagaatttgttcaaaatGAAGTAAATAATAAGTCTGCAAGAGATAATTTGAAAGGTGAAACGAGTGAAGACCATCAAAATAAgggttttaaatttgacaaagagAAGAAGGTGATGGAATGTGAATTCTGTGATCGAAAGTTTAAATACAGAAAGAGCTTCGTGCATCACATGCAAACCGAGCACGGCATGTCTGATGAAAGCGATGTTCCTCTCAGCACTTATGTCACAAAACAAGATGatataaaaaacgaaatgtcCGAATCAGAACCTGCAGTTGTAGCTGTAGTTGAAGCAAATGAACCCAAAGATGAAAGTGCCGAAAATTCGATTGATGGAATCGAAAGTTTAGATGACAACGATTTATTAGTACCGGCAACCAATAGAAAGATGCACAGTTGTCATGTATGTGAATCTAAATTTGCTCGTGCAAACCACTTAACCAGACACATGACGTTACATAGAGCTGTTCTTATTCATAAATGTGATAGGTGTGATAAAGCTTTTGCAACACCCGAATATTTAGCCAAGCACACCCAAGAAGATCACATCGATAAACCTTATGTTTGCACGATGTGTAATAAACCTTTTAGCCGAGGTGAACATCTTATACGTCATTTGAAAGTACACAGTAACAATGGTCcagaggaaaatttaaaatgctccATTTGTGAGAAAACGTTTAGcagATCCGATCACCTGGCTCGACatacaaaaattcatttgCAACAAGACAAAAGGCACATTTGCTCTGAATGtggaaaagcttttaataGAATAGATAATTTGAAGACACATCAAAGAATACATGCTGGTCTCAAAGATACTTCTCGGCTTCATTTGTGCATTTACTGTGGTAAAGAATTTAACAATTCTAGCAATATgATTGTTCATATGAGACGTCATACTGGAGAAAGACCGTATAAATGCTCGATATGTAGTAAAGGATTTCCAAGATCTCATGATTTAAAGTGTCACGAACGTACACACTCAGGAGAAAAACCttatttatgtactttatgtgGTAAATCGTTTAACAAGAGTAATAAATTGCTAAGACATACGAGAGTTCATACTGGAGAAAGGCCATATGTATGCAATTTGTGTGGAAGAGCCTTTACTCAATCGAACGATCTTGCTCTACATATGCGAAGACATACAGGTTCTAGACCTTATGCTTGCGGCGTTTGTTCGGCTCGATTTATACAATCGGGTCAACTTAAAGCTCATCGGCGATCGACGGGTCACTGGATGGAAACTCAACCTGATCTCAAAGGTGGCCACAGGGTAGAATTAGTAACACCGATAACGGATCCCGTAcctatcaaatttaaaacgcaCGGCAAAACTCAGTTGAAATTGGAATCTGAAGAACTTAAGCCGCGTATTTTAGGCCATAGTGTCGGCATCATGGGAAATATAAGcattcaaaataattcttcGGAGTCATCTCAACCTATTATAATAGAGAGTACAAAACTACTTCAACAATTTCAAAGTGCCGGTTTCAATGTGGGTCTTGCTTCGGTTATTAATGCAGCTGGTTGTTcaaacgataaatttaaaaacgaagtgGAAAACTATGGACAAATTGCGCACGAGAACTCAACAGAAGAAAAAATGGAAGTAGGCCATAACAGCGAAGCTGCATTTCCGACAGTCAGTGCTTCGGCTAGTTTTTCTAGTCCCGAACGAttcaattatcaaaattacgGTTAA
Protein Sequence: MMISKETAMVMQKICRSCMCESAEMRSVFSTKDAEEGQTLNLADMLMACTSIQITPDDGLPVQLCLTCETKLDSAFEFKQQCERTDTTLRELTNQSVPKRSIKEESYDIIVQPDLDPADLYASDSDSNPETKKIKSPKDPNIFTCSYCQKVLRTKKGLNIHQRRHTGEKLRTCHLCQANFTRTNHLRRHLETHNRNKQPITSHTCGECGETFSKAYHLVKHKKEHKFGGINVKKESFNDMDDNNEVDERTDFEGDEEFVQNEVNNKSARDNLKGETSEDHQNKGFKFDKEKKVMECEFCDRKFKYRKSFVHHMQTEHGMSDESDVPLSTYVTKQDDIKNEMSESEPAVVAVVEANEPKDESAENSIDGIESLDDNDLLVPATNRKMHSCHVCESKFARANHLTRHMTLHRAVLIHKCDRCDKAFATPEYLAKHTQEDHIDKPYVCTMCNKPFSRGEHLIRHLKVHSNNGPEENLKCSICEKTFSRSDHLARHTKIHLQQDKRHICSECGKAFNRIDNLKTHQRIHAGLKDTSRLHLCIYCGKEFNNSSNMIVHMRRHTGERPYKCSICSKGFPRSHDLKCHERTHSGEKPYLCTLCGKSFNKSNKLLRHTRVHTGERPYVCNLCGRAFTQSNDLALHMRRHTGSRPYACGVCSARFIQSGQLKAHRRSTGHWMETQPDLKGGHRVELVTPITDPVPIKFKTHGKTQLKLESEELKPRILGHSVGIMGNISIQNNSSESSQPIIIESTKLLQQFQSAGFNVGLASVINAAGCSNDKFKNEVENYGQIAHENSTEEKMEVGHNSEAAFPTVSASASFSSPERFNYQNYG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00951125;
90% Identity: iTF_00951125;
80% Identity: -