Basic Information

Gene Symbol
Ssb-c31a
Assembly
GCA_950108345.1
Location
OX467288.1:27755282-27755635[+]

Transcription Factor Domain

TF Family
PC4
Domain
PC4 domain
PFAM
PF02229
TF Group
Unclassified Structure
Description
This domain is found at the C-terminal end of Activated RNA polymerase II transcriptional coactivator p15 from humans, YdbC from Lactococcus lactis, and other PC4 family members. p15 has a bipartite structure composed of an N-terminal regulatory domain and a carboxy-terminal cryptic DNA-binding domain [1-4]. Activity is controlled by protein kinases that target the regulatory domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 0.37 7.7e+03 -3.3 1.2 31 37 3 9 3 9 0.85
2 2 4.1e-27 8.4e-23 79.8 0.6 1 51 37 87 37 88 0.98

Sequence Information

Coding Sequence
ATGCCTAAACGTAAGCCAAGCAAGAAACAAGAGTCGTCAGACTCCGATTCTGGCCCAGAAGATAGGGGACCGgctaaaaaggaaaaaaaagcCGAGGAAGAAAATTCGTGGGATTTAGGAAATAAACGTTTCGCTAAATTGACCGAATTTAAGGGTAAATGGTATGTTAGCATTCGTGAGTATTATGATGCCGACGGTGAGCTGAAGCCTGGAAAGAAAGGAATCATGCTGACAATGCCACAGTGGCATAAATTCAAGGAAGTATTTAATGAAATCGAAGAAGCTGTTaagaaaaatgtgtaa
Protein Sequence
MPKRKPSKKQESSDSDSGPEDRGPAKKEKKAEEENSWDLGNKRFAKLTEFKGKWYVSIREYYDADGELKPGKKGIMLTMPQWHKFKEVFNEIEEAVKKNV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-