Mfla013623.1
Basic Information
- Insect
- Malthinus flaveolus
- Gene Symbol
- egg
- Assembly
- GCA_950108345.1
- Location
- OX467288.1:7728274-7734122[+]
Transcription Factor Domain
- TF Family
- MBD
- Domain
- MBD domain
- PFAM
- PF01429
- TF Group
- Unclassified Structure
- Description
- The Methyl-CpG binding domain (MBD) binds to DNA that contains one or more symmetrically methylated CpGs [2]. DNA methylation in animals is associated with alterations in chromatin structure and silencing of gene expression. MBD has negligible non-specific affinity for DNA. In vitro foot-printing with MeCP2 showed the MBD can protect a 12 nucleotide region surrounding a methyl CpG pair [2]. MBDs are found in several Methyl-CpG binding proteins and also DNA demethylase [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.53 1.8e+03 -1.2 0.0 26 40 470 484 462 514 0.73 2 2 1.9e-15 6.6e-12 45.1 0.1 5 70 760 818 757 824 0.84
Sequence Information
- Coding Sequence
- ATGTCTAATGCCGACGAATGTGCAGaTGACTGTGCCGAAGAAGGTGCAATGGAAATGGAAATCGACGAAACTGTTCCAAATACATCTATAATAGAAAACAAGCGTATAAGTGACTCATTTCTAAATACATCAACCGATGCTGGAAATGATGTAGAAATGAAATCGATTGTTGCGGTGGAATCAAAACAAATGGTTGAAGATGATAAATCTAGTGTTGCTGTGGCATCAAAACAAACGATCTCTACTAATATCAAAGAGGATTCCAAAGACGACGACGATGTTGTGGTAATTTTAGACGACGGCGTGATGGAGAATGTATCTAGCAGtagaaaaaaactgttaaatgaaaaattggcCGAAATTAAAGAGTGTGATGTCATTAACTTAGTTGATAAGGGTAGCGCCAATAGTAAATGCATAAATTACGCGTGTAAAAGTGGTCTGGAATTTGTGTATGCgcctattttttgtttaaatttttatcgcgtcaatatttctaaaagaaaaaaccaaGAAGTTTGTATGGAGTGTTTGAATTATGCTTTAGAGCACTACGAAGTTTTAGCCGAAGCATTAAAAAATCATAGGAGACTAATGGATTGCCCAATTCCTATTAGAAATGATTTAGTCGAAATTGACGATTCGGATTCTGAAGAAGAAAGTGagcccaaaaattgtttatattttgatgAAGAAAGTGTCAAACTATTAGATGAAGTATTTGACGACGTGATAAACCGAATTATGGAGGAATATAAATTGGATGCTCATTGTGAAGAGTCTATtaagtttttgagaaaaaaagcAGAGTTCGTTAAAGGAATTTATTTGGAGGTAGATACTATGTTACATGATGTTAGATACAAATTAGACCGTATTCATCATGATCTTTAtgcagaatttaaaattatatatgaAAATTTACCTGCACTAGACATTAATGATTCCACAccatctaaaattttaatgccaTCCGCAACAAAGATTAATTCAGcaTCACAATTGTCACAATGTAAGACAATTCAAGAGCAAAACAAAAAGGTAGAAACTGAGAGACGTAGTCTTCGTAAATCTAAAGCCGTATCGTATGCAGAGTTAGACGATCCTCACTCTAATTCCAACAGTCCTATTGTAGTAGATACCTCGTTTGGTGGACCTAAGGAATCGATTGAAGCAATCGAAATTCCGCCTGTACCACCAGATCTTCCAATAAGCGGCCCAGTAGTAAAGCCAGCATTGAAAATAGgCGAATATTATTATGCGGCTCGTCTTGGTACCATGGGCTCGTGGGTTAAAGTACGCCTTATTAACATGGTAAAACCGGGCGATACAGTAAATAAAGAAGAAGTTAATGAAGTTATGTATTATGTAGCTATAGAGagtaagcttttaaacaaaaacaccaACCGTTTAGTTTATGGTAAGGATATCGCTTACTCGACTCCCTGCTCGGTGATGTTAGAAGTAGGAACACGCGTGATTGCTATATTTCGCGAAACGTCCGCAGCTGGCGACTTGAAAAAAGCCAAACGCGATACTTTCTATCCGGGAATAATTGCAGAACCACTTTCATATTCAAATCGATACAGgtatttgatattttttgacGATGGTTATGCACAGTATGTTAATCACAATAcggtttatttaatttacgagTCGAGTAAGGAAGTTTGGAAGGATATGCACTCAGATTCGCAACCGTTCATTAAAAAGTATCTCGAGGCGTATCCCGAACGTCCTATGGTTAAGTTACGTAAGGATCAAACGGTTCGTACCGAGTATAATGGTAAATGGTGGCTAACAACTGTCACCAATATCGATTGCTCGTTAGTACAAATGTTTTTTGATGCTTCTAACCGCGTTGAATGGATTTATCGTGGTTCCACCAGACTTAATCCGATGTATCAGGAAGAGCTTGCAGCTTCGGCTCGCCACAATAAGAATCGCATACCGAGAGCatttaatgaaactgGACCGTACGTTCAGTATACTCGAACAAATAACGAACAGCTAGGTCAGGCGGCTTCGGATGTGTGTCGTTCCGTTGCACGTAAGAGCACATCTACACaaattgttccagcaaataGAATGGTACCTCCGGGAATGGTTCCATTTTTACCAATTGTAAACACAAATACTGTGCAACCTGCTAGCAAAGTTgtgtaCTTCACCCCAAGAGCTCAAGCCAACACGAAGAATCTCTACAAAGCTCATACTTGCTCCTTCTCGTGCAAGAATTACATTACGTACGacgtgaaaaaattaaaaggttACAATCCTTTATCGAAACCGTTGCTCTGTGGTTGGAATCGTGTGACTTATAAACATAaaggaaaaaaagaaataacttACAAAGCACCCTGTGGACGTTTTCTACGTAACATGTCTGAACTACACAAGtatttacgaattacaaaaagCGAAATGACCATCGATCTGttcgattttgatttttgggtCCACTGTTTGGCCGAATTTGTTTTAGAGCGCAATTCGACCATTAACAAGGACATGTCTAATGGACTGGAAAATGTTGCTATACCGGTGGTTAATTATGTGgatgataaaaaaattccattctCAAAGTATTCTATCAAGCGAGAACCCATGAAGGGCGTTCCTATGAATCTTGATCCCAACTTTTTATGTGGATGTGATTGTGAAGACGACTGCCAAGATAAGACTAAATGCCAGTGTTGGCAATTGACGTTGCAAGGCATGGCCTACATGAGTAAAAATACTTCTCCAGACAATGTGGGTTACATCTATAGGCGATTACCAGAGCCCGTTAGTACGGGGATTTATGAATGCAATTCcagATGTAAATGCGCCAAAACTTGTTTAAATCGTGTGGTACAGAATCCGCTTCAACTAAAGTTGCAAGTGTTTAACACCGGTAATCGAGGTTGGGGCATAAGATGTTTAAACGATATACCGCAAGGAgcttttatttgtatttacgCCGGCTCACTGTTAACCGAACAGGAGGCCAACGAGGGCGGACAACATCACGGAGACGAATACTTCGCCGAACTGGATTACATTgaagttgtagaaaaaatgaaagaagaCTACGAAGATGATGTCGTcatggacgaagacgaagacaaaaaaagcaaagaaGAGTCTGCCGATGAGGAAGAGATTAATGACGTGCGTAAcggaaaaaagaaaactgaTGATCCCGTTTTTGTTCCATCGTCTCATTTTCCTAAAGGAAAACCGCACACTCCCGTTTATAAAACTCGACTTCGAACTAACGAAGGTGGTACCAAACGTAAAAAAAGCGACGATTCTGACGATGATACAGTCACAATTAGTGACGATGAAGATGGTATACGCGAACCGTCGAGTTTTAATCCAAAAAATGGAGATGATTTAGACGAATCGCGTCCTTCTCTGCACAAGTCGGTTCGTCAAATGTACGCCGACGACGAATGCGTTTACATTATGGATGCCAAAGTTTCTGGAAACATAggtcgttttttaaatcattCGTGTTCCCCAAATgtatttgttcaaaatgtGTTTGTCGATACCCACGATCTACGCTTCCCTTGGGTTGCATTTTTTGCTTTAACATATATAAGAGCCGGTACCGAGCTTACTTGGAATTACAATTACGATATAGGAAGCGTTCCTGGAAAAATGTTGCATTGCTATTGTGGTTCCGATGACTGTCGTGGACGACTTCTTTAA
- Protein Sequence
- MSNADECADDCAEEGAMEMEIDETVPNTSIIENKRISDSFLNTSTDAGNDVEMKSIVAVESKQMVEDDKSSVAVASKQTISTNIKEDSKDDDDVVVILDDGVMENVSSSRKKLLNEKLAEIKECDVINLVDKGSANSKCINYACKSGLEFVYAPIFCLNFYRVNISKRKNQEVCMECLNYALEHYEVLAEALKNHRRLMDCPIPIRNDLVEIDDSDSEEESEPKNCLYFDEESVKLLDEVFDDVINRIMEEYKLDAHCEESIKFLRKKAEFVKGIYLEVDTMLHDVRYKLDRIHHDLYAEFKIIYENLPALDINDSTPSKILMPSATKINSASQLSQCKTIQEQNKKVETERRSLRKSKAVSYAELDDPHSNSNSPIVVDTSFGGPKESIEAIEIPPVPPDLPISGPVVKPALKIGEYYYAARLGTMGSWVKVRLINMVKPGDTVNKEEVNEVMYYVAIESKLLNKNTNRLVYGKDIAYSTPCSVMLEVGTRVIAIFRETSAAGDLKKAKRDTFYPGIIAEPLSYSNRYRYLIFFDDGYAQYVNHNTVYLIYESSKEVWKDMHSDSQPFIKKYLEAYPERPMVKLRKDQTVRTEYNGKWWLTTVTNIDCSLVQMFFDASNRVEWIYRGSTRLNPMYQEELAASARHNKNRIPRAFNETGPYVQYTRTNNEQLGQAASDVCRSVARKSTSTQIVPANRMVPPGMVPFLPIVNTNTVQPASKVVYFTPRAQANTKNLYKAHTCSFSCKNYITYDVKKLKGYNPLSKPLLCGWNRVTYKHKGKKEITYKAPCGRFLRNMSELHKYLRITKSEMTIDLFDFDFWVHCLAEFVLERNSTINKDMSNGLENVAIPVVNYVDDKKIPFSKYSIKREPMKGVPMNLDPNFLCGCDCEDDCQDKTKCQCWQLTLQGMAYMSKNTSPDNVGYIYRRLPEPVSTGIYECNSRCKCAKTCLNRVVQNPLQLKLQVFNTGNRGWGIRCLNDIPQGAFICIYAGSLLTEQEANEGGQHHGDEYFAELDYIEVVEKMKEDYEDDVVMDEDEDKKSKEESADEEEINDVRNGKKKTDDPVFVPSSHFPKGKPHTPVYKTRLRTNEGGTKRKKSDDSDDDTVTISDDEDGIREPSSFNPKNGDDLDESRPSLHKSVRQMYADDECVYIMDAKVSGNIGRFLNHSCSPNVFVQNVFVDTHDLRFPWVAFFALTYIRAGTELTWNYNYDIGSVPGKMLHCYCGSDDCRGRLL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00950864;
- 90% Identity
- -
- 80% Identity
- -