Basic Information

Gene Symbol
ZBTB41
Assembly
GCA_030247185.2
Location
CM058071.2:16025419-16028630[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 17 0.015 1.2 10.9 0.9 1 23 236 259 236 259 0.98
2 17 0.00069 0.054 15.2 3.2 1 23 266 288 266 288 0.97
3 17 0.0069 0.54 12.0 1.0 1 23 294 317 294 317 0.96
4 17 4 3.1e+02 3.3 0.8 1 22 329 350 329 352 0.77
5 17 0.00042 0.033 15.9 2.5 1 23 409 432 409 432 0.97
6 17 0.002 0.16 13.7 2.6 1 23 437 460 437 460 0.95
7 17 0.0016 0.13 14.0 3.1 1 23 472 495 472 495 0.96
8 17 0.05 3.9 9.3 0.7 1 23 514 537 514 537 0.89
9 17 9.1e-05 0.0071 17.9 4.0 1 23 544 566 544 566 0.98
10 17 0.011 0.86 11.4 0.8 3 23 574 595 572 595 0.92
11 17 0.00033 0.026 16.2 4.1 2 23 652 673 651 673 0.95
12 17 0.0029 0.23 13.2 1.2 1 23 679 702 679 702 0.97
13 17 0.014 1.1 11.0 3.0 1 23 714 737 714 737 0.95
14 17 0.012 0.91 11.3 1.4 1 23 768 791 768 791 0.94
15 17 0.00067 0.052 15.2 4.0 1 23 798 820 798 820 0.99
16 17 0.0017 0.14 13.9 0.9 1 23 826 849 826 849 0.96
17 17 0.0064 0.5 12.1 0.5 1 23 859 882 859 882 0.93

Sequence Information

Coding Sequence
ATGGACACGGATACTGTCCCGGATGTCCCCAATGACAACCCGGAAACATACTGCAGGCTGTGTTTTTCTGGCTTCTATGTGGAACCCTTGTTTCCAGTGGATTCCGAACCAAAACAAAGCCTCATTGATCTCATCAGTAGACATGTTGATATTCACATTACACCTGATTCGGATTTTCCCTGTTCGGTTTGTCGAATGTGTCAAATGACGCTGGAGGGCTTTGCCAAATATCGCGACCGCTGCCATCAACTGGACGAGGTTTTGCAGCGCAAGCGGATGGAGATGATGCAGATTCGGGTGAAGGTCGAACATCAGGAAGAATTGACGCAAAATGCAGTTGGGTTTGAGCAGGATACGATTTACTGTTTGAGCGATACGGACGACGAAGAGATTGACGAGGAACATATGCCGTTGGAAGAAGAACAACCGGAAGAGGAGGATGATGAAGTGATCGACGAGGAAGTGGAAGAAGAACTCATAAAAGGTGACATTCTGATCAAATCGGAACCGTACACGGAGGACGAGTATGGTGGACATCAGCAAACTGCGCCAATGGAAGGGAAGGATGTAGTTGTTCTGGACTCGGAAGAAGATGAACAATCGATGGAAGCGTCGACCCGAGCTAGTAGTGAGGCACACGGAGAAGAACCTGTCAAAGACGAACCAACGAGACCGTTGCCATTCGAAGTGACGTCCGATGGAGCGTATCGTTGcacactttgccaggaaacattCCGATTGATGAAGGAAATTAAGGGTCATATTCGCAAAGATCATCCACAAGAGTCGCAGATATATTCTTGTCGCTTTTGTCAGAAGAAATTTTCCGATACTGGTTCTTTGCGTGTTCACACTCGATTTCACACAATGGACTTTCCGTTCTCTTGCGATGATTGTGGCGCTAAGTTTACAATGAAACAACGGTTGGACAAACATGTGTCCCGTTATCACGATAAGGAATCACCCAGCTATACAGATAAGCGCTTCACATGTACCCTTTGTCCTCGTATTTTTCTCCAGGAGCAAGCACGGAACATGCACATTATTCACTTCCATGATGTTAAACCGGTTGATGCTTCGGTGGAACCTAGTTTACCGGTAGAACAGGTGTTCTACTGTGAAGCTTGTCAGCAAGAGATCGAAACGTGTCTTGAACATTTGAAGGAACGCCATCCCGGGGCGGGTAAGGAAGGTGCCGAACCGAAACCGAAAATCTCCAAACGGTATAAATGTACTGATTGTCCCAAATTGTTCCGCCATCGGACTGCCTACCGGTCCCATGTAATGATCAATCACGGAACGATGCCGCACAAGTGTGACATATGCGGAAGTAGTTTCGAGAGGCGGGCCAAACTAGTACACCACAAAGAGCGTTGGCACGGTGAGAATGCCAAAAATAAAGTCCTGGAACGGTACAAATGCGATCATTGCGATCGGTTCTTCGTTAGGAATCAAGATCGATTTAGACATGAGCAGATAATTCACAGCATAGCTTCACCGGCTAAACTGCCAACGGTTTGGGAGGGTAGAAAGAGCAATTTCCCTTGTGCCAAGTGCGATCGAAAGTTCCCGACAATGAAGACAATGAGAATACATTTTGCATTGAAACATCCGGAAGTCCCGGTCAGATTCAAGTGTACGGTCTGTAACAAGctgttcaaacacaaaacttccCTGCGAGACCACATGGCTAATCATACCGGACAGCAACCGTATGGATGTGTCCATTGTGAGGAGCGATTTATCCGGAAGAAGGATATggaacgtcatctggaagacatgCACGGAGCGGAGGGAGGAACGGGAAGCGCGGAACAGAAGGAACGTTTCGCTTGCATGTACTGTCCGCGAACATTGCTATCGAAAACGGCACGTTATTTGCACATCAAACACAACCACGCCGACAAAGAACCGATCGCAAAGCAAGTTCTACTTTCGTTGCCCGATTCGCTTACCTGTAGCCACTGCAAGAAATCCTTCACCAGCCGAAACACCTTAAAGTTGCATGTCCTCAATCATCTGGGAAAGCTGCCGCATCAGTGCGATACGTGCGATGCCGGATTCTACAAGCCAGCCGATTTGCTGAAGCACAAGCAACGCTACCACTCCGCAGGATCATCCATGAGTTTGgccaatcgcttcaagtgtgcCTATTGTCCACGTATCTTCATTCGCAAATCGGCTCGGCGCTATCATCACACAGTTTTCCACGGTATGGAATCGAAGAAGAATGTCGCACCACCGTCCTCTCGCCCCACCCGTACCGTTCGCAAACGTATCAAAATGGATCCGGACATGGAACATCCGTGCGCTCTATGTACACTGGTATTCGTCACTACCAGCATGCTGCAGGCccatcatcagcagcagcatCCCGAGCAAGATTTCTTCTACAAGTGTCCCCATTGTCCGAAACGAACGGTGCACCGTAACTCCTATCTATCGCACATCAAGGTTCATATCGGCGGATACCGGCATCCATGCGACGAGTGCAACGCTCAGTTCGATCGAAAAGTAGCTCTCGTGAACCACAAGAGACGCTACCACGGTGAAGCCGCCAAAAGCAATCAACGTTTCTACTGCACCTTGTGCAACAGGGAGTTCGTCCGTAATCAAGATCGGGTTCGTCATCAAATTGCCGTACACAACTACCGGGTGCAGGGTAGCAACGCCACCCCAAGTCCAGGTCCGTCAAAACCAGCAGCATCATCTTCGAAAAAGCTCAAGCTAAAAGTGAAACAAGAAAAGATCACAGCGGATAACACCAGTCTGGTAGAACCCATGGTGGAACCCAACCAGTCTAGCGAGATCAGCCAGTCTAGTGAGTTCAACACCTCGGGCAGTAACGTGATCAAGAAGAAGGGATTTTTTGTCGATAGTGACGTCGAAGATTACGGTGACCCAGACGACGACACTGACGGAATACCAGATCAACCGAACGATGGAACCGAAGCAATGACCGACCAGGTAAGTGGGGAGGGATCGGTACCGACAATTTctagcgttgtgtccattaagCAAGAGGCAATTGCGTCGCGAAAGGGATTTAGCGAGTATCCAGCAGAGTTTTAA
Protein Sequence
MDTDTVPDVPNDNPETYCRLCFSGFYVEPLFPVDSEPKQSLIDLISRHVDIHITPDSDFPCSVCRMCQMTLEGFAKYRDRCHQLDEVLQRKRMEMMQIRVKVEHQEELTQNAVGFEQDTIYCLSDTDDEEIDEEHMPLEEEQPEEEDDEVIDEEVEEELIKGDILIKSEPYTEDEYGGHQQTAPMEGKDVVVLDSEEDEQSMEASTRASSEAHGEEPVKDEPTRPLPFEVTSDGAYRCTLCQETFRLMKEIKGHIRKDHPQESQIYSCRFCQKKFSDTGSLRVHTRFHTMDFPFSCDDCGAKFTMKQRLDKHVSRYHDKESPSYTDKRFTCTLCPRIFLQEQARNMHIIHFHDVKPVDASVEPSLPVEQVFYCEACQQEIETCLEHLKERHPGAGKEGAEPKPKISKRYKCTDCPKLFRHRTAYRSHVMINHGTMPHKCDICGSSFERRAKLVHHKERWHGENAKNKVLERYKCDHCDRFFVRNQDRFRHEQIIHSIASPAKLPTVWEGRKSNFPCAKCDRKFPTMKTMRIHFALKHPEVPVRFKCTVCNKLFKHKTSLRDHMANHTGQQPYGCVHCEERFIRKKDMERHLEDMHGAEGGTGSAEQKERFACMYCPRTLLSKTARYLHIKHNHADKEPIAKQVLLSLPDSLTCSHCKKSFTSRNTLKLHVLNHLGKLPHQCDTCDAGFYKPADLLKHKQRYHSAGSSMSLANRFKCAYCPRIFIRKSARRYHHTVFHGMESKKNVAPPSSRPTRTVRKRIKMDPDMEHPCALCTLVFVTTSMLQAHHQQQHPEQDFFYKCPHCPKRTVHRNSYLSHIKVHIGGYRHPCDECNAQFDRKVALVNHKRRYHGEAAKSNQRFYCTLCNREFVRNQDRVRHQIAVHNYRVQGSNATPSPGPSKPAASSSKKLKLKVKQEKITADNTSLVEPMVEPNQSSEISQSSEFNTSGSNVIKKKGFFVDSDVEDYGDPDDDTDGIPDQPNDGTEAMTDQVSGEGSVPTISSVVSIKQEAIASRKGFSEYPAEF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01462457;
90% Identity
-
80% Identity
-