Mgen019600.1
Basic Information
- Insect
- Malaya genurostris
- Gene Symbol
- ZFY
- Assembly
- GCA_030247185.2
- Location
- CM058072.1:214632989-214642979[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 0.00053 0.041 15.5 0.3 3 23 173 193 171 193 0.97 2 14 0.0071 0.56 12.0 4.4 1 23 199 221 199 221 0.96 3 14 3.2e-06 0.00025 22.5 0.4 1 23 230 252 230 252 0.98 4 14 3.5e-06 0.00028 22.4 6.4 1 23 258 280 258 280 0.99 5 14 0.0063 0.49 12.1 0.3 2 23 288 309 287 309 0.97 6 14 0.00028 0.022 16.4 7.4 1 23 315 338 315 338 0.98 7 14 0.0075 0.59 11.9 5.5 1 21 344 364 344 365 0.94 8 14 0.038 3 9.7 3.0 3 23 373 394 371 394 0.94 9 14 2.6e-05 0.002 19.7 0.8 1 23 417 439 417 439 0.97 10 14 0.00018 0.014 17.0 0.1 1 23 450 472 450 472 0.94 11 14 0.0067 0.53 12.0 1.4 1 23 502 524 502 524 0.99 12 14 0.00036 0.028 16.1 4.2 1 23 587 609 587 609 0.98 13 14 4.3e-07 3.4e-05 25.3 1.4 1 23 617 639 617 639 0.99 14 14 0.018 1.4 10.7 0.8 1 23 645 668 645 668 0.96
Sequence Information
- Coding Sequence
- ATGGAGTATAATGCGTTCAACAGTAAACATTATCCCGTAAGCAGCTCTTCGGTAGCAGGCGGTAGCTCCGGTTTTTTTCAACCAAGTTCTTCCAGTGGTTTTCTGAAAGTACCGAACACGAACGTAATACTGAAACAGGAACATATACCATCCGGATCACAGAGCGGAACTGATACACCTCCCGTAAACTACAGTCAAAATGCCCACGTTTATAACGAACAGCAATCGTTGCACCTCGACACGAAACCGGTGTATTATGCTAAGCCACTGGATCTGCAGTTAATACCCAACCATTATCTGTCGCACCCGCAGCAAAACTCCGGAGGTCAGCAGTCTACTGCCTTCCACATGACTCACGACTACCATCATGATCATTCCAATGCGTCGTCAGTTAGTTCCGGTGTAGATCAACATCGATCGTACAGCGTTCAGCCCTCGCCAGTTCATTCCGGTCAGCCAGGAGTTATTCTCCAGCATCATGTTCCCGTGACAGTGCCCCCGAAGCTCAGTTACGGTTGTGAGGTCTGCGCTAGGGCTTTCGATTCCAAGACAAAACTGGAGAAACACTATCGGATCCACAACGAGGAACCGACCTTTGAGTGTAGGATGTGCGAGAAAAAATTTCGCAGCCAAAGCACACTGACTTGCCATGAGAAGGTGCACGGGGAGAATGGAGTCGATAACAATTTTTCCTGTGTGACATGCGGGAAAGTCTTCAAGTCTGAGGACAAACTACTGATCCATATGCGTTTGCATACGGGTGAAAAACCGTACCAGTGCAAAATCTGCTTCAAGTGTTTCAATCATCAGTCGAATTTGATAGCTCACTCCCGAACACACGAAACGGTCAAGAAAGCCCTCAAATGTGACCGCTGCAACAAAGTGCTAGACAACGAGCAGCGGTTGGCGATTCACATGAGACTGCACACCGGAGAGAAACCGTACAAATGTTCTTATTGCGATAAGAGATTCAACCACAAAAGCACCGTTTGTACGCACGAAAAAACGGTCCACATTGCTTCCAATGCGTACAAGTGCGCCCGGTGTCACAAGACGTTCAACCAGAAGTGTCAGCTGCAGTATCACGAGAAGCTCCAGGAACCGCACGTCATCGCGTGCACCATGTGTGATAAGGTGTTCTGCTATCAGGCCAGCCACAAAGAGCACATGTTCAAGGTGCATTGCCCACGGTCAAAGAAATACCGTCCGATCGGTGCCGTCGAGGGTGAAGGAAGCGGTCGAAACAAGTTCAAATGTAACGTTTGCGATCGTAGATTCTACTACAAGCGGGCATTGGAGATGCACATGGGTGTGCACGATTCTTCGCTGGACGTCAACGTACTGTACTTTTCGTGCAACTACTGTCCGGAGACTTTCACCGACGAGGAACCGTTGCAGAAACACGAAGCGGAGCACATAGCCAATAACACCACTGACTTCTTGGAGAATCTCAAGTCACTGGAACAATCGGAAGATCCGGAAAATGGACAAGTAGAGGGCAaatatcgttgtccactttgttTCAGTCGCTTCGAAGATCTGGCAGGCCTGAAGGAACATCACAAGTCCCATCTCTGTTCCAATCCGGAAGAATGTGATAAATGCAAACCTACGCTTGCTGAAGAATATGATTTCACGAAAAGCACCTACGATGAGAACGATGACAACCAAGTGACGCAGTGTCATCTTTGCGAACGTACTTTACAAACGTTCGAACTATTTCAGAACCATTTCCATTACCACACCTCGCGGGTTCCGTTCTACTGCTATCACTGTAGGAAGGAGTTCCCCGATAAAAAGGAGCTATACGCACACACTAAAACGCACGCTCCAAAAGATGCCGAGTCCTATACGTGTGAGATATGTGCAAAAGTTTTCTCCACCAAAGGCAACTTCCGGCGGCACCTGAAATCACACGAAGCCATTAGAGCTTTTGCATGTGATCGatgcttcaagcagtacgactACAAGAGTGCACTGGATATGCACCTGAAAAAAGCACACGGAATTGAATACTCATGA
- Protein Sequence
- MEYNAFNSKHYPVSSSSVAGGSSGFFQPSSSSGFLKVPNTNVILKQEHIPSGSQSGTDTPPVNYSQNAHVYNEQQSLHLDTKPVYYAKPLDLQLIPNHYLSHPQQNSGGQQSTAFHMTHDYHHDHSNASSVSSGVDQHRSYSVQPSPVHSGQPGVILQHHVPVTVPPKLSYGCEVCARAFDSKTKLEKHYRIHNEEPTFECRMCEKKFRSQSTLTCHEKVHGENGVDNNFSCVTCGKVFKSEDKLLIHMRLHTGEKPYQCKICFKCFNHQSNLIAHSRTHETVKKALKCDRCNKVLDNEQRLAIHMRLHTGEKPYKCSYCDKRFNHKSTVCTHEKTVHIASNAYKCARCHKTFNQKCQLQYHEKLQEPHVIACTMCDKVFCYQASHKEHMFKVHCPRSKKYRPIGAVEGEGSGRNKFKCNVCDRRFYYKRALEMHMGVHDSSLDVNVLYFSCNYCPETFTDEEPLQKHEAEHIANNTTDFLENLKSLEQSEDPENGQVEGKYRCPLCFSRFEDLAGLKEHHKSHLCSNPEECDKCKPTLAEEYDFTKSTYDENDDNQVTQCHLCERTLQTFELFQNHFHYHTSRVPFYCYHCRKEFPDKKELYAHTKTHAPKDAESYTCEICAKVFSTKGNFRRHLKSHEAIRAFACDRCFKQYDYKSALDMHLKKAHGIEYS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01462340;
- 90% Identity
- -
- 80% Identity
- -