Basic Information

Gene Symbol
dmd-4
Assembly
GCA_963693495.1
Location
OY856378.1:12292576-12301407[-]

Transcription Factor Domain

TF Family
DM
Domain
DM domain
PFAM
PF00751
TF Group
Zinc-Coordinating Group
Description
The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.2e-24 9.8e-21 74.2 11.3 1 47 8 54 8 54 0.98
2 2 1.6 1.2e+04 -3.0 5.2 2 11 285 294 284 294 0.90

Sequence Information

Coding Sequence
atgaaCAATAGTGGACGAGCGCGAGTGCCCAAGTGTGCGAGGTGTAGAAACCATGGGCGTATATCGAGCCTACGCGGGCACAAGAAAGCCTGTGCTTATAGGACCTGCCAGTGTCCCAAGTGCGGTCTCATCAAAGAGAGACAGCGAATTATGGCTGCACAGGTGGCTCTCAAACGTCAGCAGGCAGCCGAAGATAAAATAGCTTTACACTTGGCTTCTGTAGAAAGTGGCACACATTTAGAAGCTCTCCCCCCTGGTCCCATTTACGGGATGCGAGTAACAGATCCTTGTCCAAGCCCTGGACCGGAGCCAGATTCTGCCGCTGATGATCTTACTCCCATTCACATCGACAGCGAGACGAGCGATTCCCTCCCCGATTGCTGCAGCACAACTCCCGATTCTGCTGGTAATTCTTCCGCGATACCTTTGCGAACTATAAGAAATGAAGATGGGCCAGAAATCGAGGGTCCCGTTAGCACAGCTGGTCTGGAAATGCTCAAAAAACTTTTCCCTGGCAAGAAACGTTCCGTTTTGGAGCTGGTTTTACGACGCTGTAATCACGATCTCTTGAGAGCGGTGGAACATTTTAATGCAACTCATGTCCAACGCGACAAAATCCCTGGAAGTTCTGTTTCTGGTTACGATACATCTGTATCGAGTTCAGAAGAGGCAGAAGCGAGGTGGTCAGCTTTTAGACCGGTAGGACCGCGAGCGCCGCTATTGCCAGCATTGGTTATGGGCAGGGTGTGTGGCTCCGAGTGGTTGGTTCCCCTGCCAGCACTTCCAACGCTTTCTACTCCATTCCTATTGCCCTTGCAGCACCATTCACCACCGGCGTCTTGCAATCCTTGCTCGCCAGATTGCCGGCAATGCAATCGTCACTGA
Protein Sequence
MNNSGRARVPKCARCRNHGRISSLRGHKKACAYRTCQCPKCGLIKERQRIMAAQVALKRQQAAEDKIALHLASVESGTHLEALPPGPIYGMRVTDPCPSPGPEPDSAADDLTPIHIDSETSDSLPDCCSTTPDSAGNSSAIPLRTIRNEDGPEIEGPVSTAGLEMLKKLFPGKKRSVLELVLRRCNHDLLRAVEHFNATHVQRDKIPGSSVSGYDTSVSSSEEAEARWSAFRPVGPRAPLLPALVMGRVCGSEWLVPLPALPTLSTPFLLPLQHHSPPASCNPCSPDCRQCNRH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00277400;
90% Identity
iTF_00433193;
80% Identity
-