Basic Information

Gene Symbol
arid5b
Assembly
GCA_963693495.1
Location
OY856401.1:7130216-7145382[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 9.7e-13 2.2e-09 38.4 0.1 3 89 237 311 235 311 0.91

Sequence Information

Coding Sequence
ATGTTACGACGAGTTCATTCCCGTCTCAGACGTGTAGAGGACGAGGTTCTGGCGATCAACGACAAGGTGGTGGTGCGCGCCGAAGATCTCCTCAGTTGGATGTGCACTGGCGAGGGGTGGAGGTGGGGCCTCCGCGCCGTCTGGAGGGGGGCGTGCGCGCCCCCCACCGACACGCGCCGCACCCAGGCCCTGCACCACACTAGGCTGGACTTCAGCGATGTGGAGAAGGAGAAAAACTCTATAACAATTGACGCTGAAACGCCTGGGGTCGTGGTTTTCTCGTACCCTCGGTACTGTCGGTACCGAGCCCTGGTCGCGAGGCTCGAGGGCATCCAAGCCGACTGGCTGAGGGACTCCCTGGTGGCCGCCTTGGGGGGGTACGCGGCGCCCACTAAAAACACGAGGATATTGTATTGTAAAGACACCTTTGAGTACCCGGAGCTGGAGGGACACGAGTTCGTGTGCAATCacctggcgcccaagctgaagGGGAGACCGCGCGGGCGCAGGCGGCGGGTGGCGCGCTCCAGGTCGCACACACCCTCGTCCAGGTCGAGCGACTCGGATCCGGGGAGTGAGAAGCAGCCTCAGCCGCCGCAACAGGAGCCAGCTACACCAAGACGCTTGTCCCTCCGCAACGGAGCTTCCGAGAAGCACAGCGAAGAGGATGAGTTGGACGAGAAGAAGGTCGTGCAGAATGCAGAAGACAAAGCGTTCTTGATACAGTTGAAGCAGTTTTACAAAAATAGAAACGAATCCGTCAAGATAGGGACCCACAGTTTGAAGGATTTGTCCCTTCGCGCGTTATACAGCGGCGTATGCGCACGTGGTGGTTACGAGACCGTGTGCAGGCACAAACTGTGGAGGGTGTTGTTCTCCGAGCAGCCTGCCAGGACCAGGAGACACTATGAAAGGTTTCTCCTATCGTTCGAAAATCACCAGCGACGTAACGGCACAACTTTCAAACCCAACGGACGTTACGACGAGCCCATAGACACGATAGACGTCCCAGATTCCCCCCTCCGGCCCGCAGACGAAGTGCCGAATTTACCAGAGAAACATCTAAGGACACCATCGCCAAAAGCGATCATAGACAACGAAACTGGGGAGACGAAGGATATGAACATAATATCGAAACCAGCGGAGGAGTTGAACAGGGAGTTTCTGGACTCGTTGCCAAAGCCGGAGAAAGTGGACAAGCCCCTGATATCAGTGAAGCCCGTGGAAAAGTTGTTGGGCGAAGTGAAAAGTGACAGTGAAGTGGCGAAGGATTTGAGTGCGGGTGGTGGTGTTCTTTTCAGTGAGTTGGCGCACAAGTTGAGTTTAGGAAATGCGGACACTAACATCCTGAAAGAGTTCGCGGACAGACAACGTGGGATTCCCGTGACGAATGTGGAGACGGCGACCCTGAACGGCCACGTTCCAACCCATGTTCCTCTAGATCAGAAGAACAGCCGTCCGGTGGGTAGAAGTTCACTAAGAGCGGTGAGGGTCAAGCCTACCAGACAGCCCGGGACTGCTTCGAATACACCGCCGATACCCCCCCTGCACCCGGACTCGGCGTCCTCGCCGCACACGAGCGGCCCCGGTCTGAGTGCGCCCCCGTGCCCGCCGCCCATCACCAACTTCGGCATCCACCGCCCGCCTCAGATCACCTCCTCCAACAGTCATAGCGATGATGAAATTATGGAGGTACCCTACAAGCCAAAAACACCGGAAATCATCGATCTAGACGAATACCCCGAGAGCCCGCAAGCGGTTAAGAAGAAACGGCTGGACATCCTCAAAGAGCGGGGGCTCGAGGTCACCCCCTTACCCCCCGCTCAGTTCCTACACCAACCGGTCGTGCCGAATCCGATCACCCCTCTGATAAACCCCAGCCCGATCCTCCTGAACCCGGCGATGCAACACCAAATAATGACCCAAGCGCACTTGTTCCAAATGTACAACATGATCCCGCAGAATTACAACGGTATCCAACCACCCAAGGTCATCCAGTCGACCGGTATATACGGCAACACTGGCCCTCAGAAGACCGTGTATGGCAACCCCAAAGACCCCTTCATGCCCCCACCGCACGTGCTGCACGGGGCACCCCTGAAACCCGCCAGGGTCCCAACGCAACAGCCCGCCCAAGATATATTGGATTTGACCTGCAAAACCCAATCACCACCGCCGAGGCCGACGGTGGAGATTGTCAGGATCCCCCCCTCGCCGTCCCCTTCGAAAACCCCGCAGAATTTATCCAAGAACTATACACTCTTAGATGGCAAAGCGGTCGTGGGTTCGAATTTAGAGATTACATTAGTGAACAAGGCTCAAAGCCAGAAGAGGTTGCCACAGAAGCGAAGTTCGAACGGGAAGTTCGTTTCCGCCAAGACCCCAACGCCCCCGAAGGAGTATCCCAAGATGTATACCAGTCCGAAGAAGCCCCAGATCGTTGTTCCCTCCTATCCCAGGGACGAGCCGTCGCCGACGAGTTCCACCGGCTCCAGGGATAGTCAGCAGAGCAATTTAAGTCTGAAAGCGCCAATGGAGACCCCGAAGATGCCCGTGCCCTACATGGACCCGTACATGGCGTTGTACAGCCAACTCGCCGGCCAAATGGACCAACGTCAGTTGGCGATATACAGGGACCTGATGGCCAACCAGTTTCGGGGGTACTCCAACTTTTTAAATATGGGCACCGTCACTACTCCGACAACGAAGAATTAG
Protein Sequence
MLRRVHSRLRRVEDEVLAINDKVVVRAEDLLSWMCTGEGWRWGLRAVWRGACAPPTDTRRTQALHHTRLDFSDVEKEKNSITIDAETPGVVVFSYPRYCRYRALVARLEGIQADWLRDSLVAALGGYAAPTKNTRILYCKDTFEYPELEGHEFVCNHLAPKLKGRPRGRRRRVARSRSHTPSSRSSDSDPGSEKQPQPPQQEPATPRRLSLRNGASEKHSEEDELDEKKVVQNAEDKAFLIQLKQFYKNRNESVKIGTHSLKDLSLRALYSGVCARGGYETVCRHKLWRVLFSEQPARTRRHYERFLLSFENHQRRNGTTFKPNGRYDEPIDTIDVPDSPLRPADEVPNLPEKHLRTPSPKAIIDNETGETKDMNIISKPAEELNREFLDSLPKPEKVDKPLISVKPVEKLLGEVKSDSEVAKDLSAGGGVLFSELAHKLSLGNADTNILKEFADRQRGIPVTNVETATLNGHVPTHVPLDQKNSRPVGRSSLRAVRVKPTRQPGTASNTPPIPPLHPDSASSPHTSGPGLSAPPCPPPITNFGIHRPPQITSSNSHSDDEIMEVPYKPKTPEIIDLDEYPESPQAVKKKRLDILKERGLEVTPLPPAQFLHQPVVPNPITPLINPSPILLNPAMQHQIMTQAHLFQMYNMIPQNYNGIQPPKVIQSTGIYGNTGPQKTVYGNPKDPFMPPPHVLHGAPLKPARVPTQQPAQDILDLTCKTQSPPPRPTVEIVRIPPSPSPSKTPQNLSKNYTLLDGKAVVGSNLEITLVNKAQSQKRLPQKRSSNGKFVSAKTPTPPKEYPKMYTSPKKPQIVVPSYPRDEPSPTSSTGSRDSQQSNLSLKAPMETPKMPVPYMDPYMALYSQLAGQMDQRQLAIYRDLMANQFRGYSNFLNMGTVTTPTTKN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00431917;
90% Identity
-
80% Identity
-