Basic Information

Gene Symbol
-
Assembly
GCA_949752895.1
Location
OX457153.1:859897-873411[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.2e-13 8.6e-10 39.8 0.1 3 89 223 297 221 297 0.91

Sequence Information

Coding Sequence
atgGACGAGGTGCTGGCGATCAACGACAAAGTGGTGGTGCGTGCCGAGGACCTCCTCAGCTGGATGTGCGTCGGCGACGGCTGGCGGTGGGGGCTTCGCGCGGTGTGGCGCGGCGCGTGCGCACCGCCCGCGGACACGCGCCGCACGCAGCCGCTGCACCACACCAGGCTGGACTTTAGCGATGTGGAGAGGGAGAAGAACACGTTGGCAATCGATGCGGAAAGTCCAGGTGTGGTGGTGTTCTCGTACCCACGTTATTGTAGATACCGAGCACTGGTCTCCAGGCTCGAAGGCATCCAGGCGGACTGGCTGAGGGACTCCCTTGTGGCCGCGTTAGGAGGGTATGCGGCACCCACGAAAAACACCAGGATCTTATATTGTAAGGATACGTTCGAATACCCCGAGCTCGAGGGTCACGAATTCGTTTGCAACCATCTGGCGCCGAGGTTGAAGGGCAGACCTCGGGGGCGGAGACGGAGGATCGCGAGGTCCAGATCTCATTCGCCTTCATCTAGGTCCAGCGACTCCGACCCCGGGGTCACCCATCCTCACACTCCGCAGGATTCTAATACACCGAGACGCCTTTCCCTACGCAACGGGGCGCCTGAGAAGCACAGCGAAGAAGAAGCAGAAGACGGCAAGAAGGTGGAGCAGACCGCGGAAGATAAGGCGTTCTTGGTCCAGTTAAAACAGTTCTATAAGGATAGAAAGGAGCTGGTCAAAATCGGCACGCACAGTTTGAAAGATTTGTCCCTGCGCGCGCTGTACAGCGGCGTGCGCGCGCGCGGCGGCTACGACGCCGTCTGCAGGCATAAGTTATGGCGCGTGCTGTTCGCGGAGCAATCGGCGAGGACGAGGAGACATTACGAAAGGTTTCTCCTACCATTCGAGAACCACGAGCGTCGCAACAGAACAGCATTCAAACAAAACGGACGGATAAACGAACCCATAGACACGATAGACGTGACAGACTCTCCTCTCCGTACCGTAGAGAACGCACCGGAGCTACCGGAGAAACGACTCCGCACACCGTCCCCGAAGAGAGAAGTCATTGACAACGAGACGGGCGAAATGAAAGAGGAGATCAATCTGGTATCGAAACCGGCGGAGGAGTTGAACAGAGAGTTCCTCGAGTCCCTTCCTAAACCGGATAAAGTGGAGAAACCCGCGAAGATCTCGGTGAAACCCGTGGAGAAGTTGTTGGAGGATTCGGTGAAAAGTGATAGTGTTAAGTGCGATGTGTTGCCGAAGGATCTGAGTGCGAACAGCCAGTTCTTTAGTGAGTTGGCGCATAAGTTGAATTTGGGCAACGCTGACACGAGTATCCTCAAGGAGATAGCTGACAGGCAACGGGCAGGTCCTGGAACCAACCCTGAAGCCACCCTGAATGGACACGCAACGACACACATACCTCTCGATCAGAAAAATAACCGTCCAGCTGGCAGGAGTTCCTTGCGAGCGGTAAGAGTGAAACCCACCAGACAGCCTGGCACAGCTTCCAACACACCACCCATACCGCCGTTGCATCCGGACTCGGCCTCGTCTCCGCTGACGAGTGCGTCCGGTCTGTGCGTCCCTCCGAGCGTGCCCCCCATCACGAACTTCGGTATCCACCATCCGCCGCAGGTCACCTCGACGAACAGCCATAGCGACGATGAAATTGTCGAGGTGCCCTATAAACCAAAAACGCCAGAAATAATCGACCTAGACGAGTATCCGGAAAGTCCGCAAGCCATGAAGAAGAAACGGCTAGAGCTCCTCAAAGAGCGGGGGCTCGAAGTCACCGCATTACCGCCAGCTCAATTGTTGCCCCAACCAGTCATCCCCAACCCCATAACTCCGATATTGAACCCCAACCAGATGATGTTACCACCAGCTATGCAGCACCAGATAATGACTCAGGCGCAATTATTCCAAATGTATAACATAATACCACCGAATTACAATGGGATCCAACCCCCTAGAGTAATACAAGCGACCTGTATATATGGCAACACCGGCCCACAGAAGACTGTATATGGCAACCCCAAAGATCCTTTCATGCCACCTCCCCACGTTCTTCATGGTACACCGGTCAAACCCACAAGAGTTCCAAGTCAAACCCAATCGACTCCCGCGCAGGATATATTAGATTTGACCTGTAAATCTCAGTCGCCTCCGATACAAAAACCCGCGGTGGAAATAGTCAGAATACCATCATCTCCGTCACCTTCGAAGAACCCCCAAAATCTATCCAAAAATTACACCCTGTTAGACGGGAAAGCGGTCGTGGGATCGAATTTAGAAATCACTTTGGTGAATAAATCTCAAAATATCCCAAAATCCCGTATACCACCAAAGAGGAGTTCAAATGGAAAATTCGTGTCGACAAAAACCCCAACTCCCCCGAAAGACTATCCAAAGTCTTATACAAGTCCCAAGAAACCCCAGATAGTCGTACCTTCATATCCGTTACGCGAGGACGCGTCACCGACCAGTTCGACCGGCTCCAGAGACAGCCAGAACAATTTGAGCTACAAGGGGCCGAGTTTGGACGCGGTGCCAAAAATGCCACTGCCCTACATGGACCCGTACATGGCACTGTACAGCCAACTCGCAGGACAGATGGACCAACGTCAATTGGCTATATATAGAGATCTAATGGCCAACCAGTTTAGGGGTTACTcgaactttttaaatatgagCACCGTAAGTACGCCTACAACGAAGAATTAG
Protein Sequence
MDEVLAINDKVVVRAEDLLSWMCVGDGWRWGLRAVWRGACAPPADTRRTQPLHHTRLDFSDVEREKNTLAIDAESPGVVVFSYPRYCRYRALVSRLEGIQADWLRDSLVAALGGYAAPTKNTRILYCKDTFEYPELEGHEFVCNHLAPRLKGRPRGRRRRIARSRSHSPSSRSSDSDPGVTHPHTPQDSNTPRRLSLRNGAPEKHSEEEAEDGKKVEQTAEDKAFLVQLKQFYKDRKELVKIGTHSLKDLSLRALYSGVRARGGYDAVCRHKLWRVLFAEQSARTRRHYERFLLPFENHERRNRTAFKQNGRINEPIDTIDVTDSPLRTVENAPELPEKRLRTPSPKREVIDNETGEMKEEINLVSKPAEELNREFLESLPKPDKVEKPAKISVKPVEKLLEDSVKSDSVKCDVLPKDLSANSQFFSELAHKLNLGNADTSILKEIADRQRAGPGTNPEATLNGHATTHIPLDQKNNRPAGRSSLRAVRVKPTRQPGTASNTPPIPPLHPDSASSPLTSASGLCVPPSVPPITNFGIHHPPQVTSTNSHSDDEIVEVPYKPKTPEIIDLDEYPESPQAMKKKRLELLKERGLEVTALPPAQLLPQPVIPNPITPILNPNQMMLPPAMQHQIMTQAQLFQMYNIIPPNYNGIQPPRVIQATCIYGNTGPQKTVYGNPKDPFMPPPHVLHGTPVKPTRVPSQTQSTPAQDILDLTCKSQSPPIQKPAVEIVRIPSSPSPSKNPQNLSKNYTLLDGKAVVGSNLEITLVNKSQNIPKSRIPPKRSSNGKFVSTKTPTPPKDYPKSYTSPKKPQIVVPSYPLREDASPTSSTGSRDSQNNLSYKGPSLDAVPKMPLPYMDPYMALYSQLAGQMDQRQLAIYRDLMANQFRGYSNFLNMSTVSTPTTKN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00432920; iTF_00947685;
90% Identity
iTF_00432920;
80% Identity
-