Msep159096.1
Basic Information
- Insect
- Magicicada septendecula
- Gene Symbol
- -
- Assembly
- GCA_034769895.1
- Location
- CM068371.1:45713431-45714537[-]
Transcription Factor Domain
- TF Family
- BTB
- Domain
- zf-C2H2|ZBTB
- PFAM
- PF00651
- TF Group
- Zinc-Coordinating Group
- Description
- The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 10 0.44 2e+03 3.0 0.0 54 76 20 42 16 45 0.86 2 10 0.5 2.3e+03 2.8 0.0 55 76 57 78 52 81 0.86 3 10 0.5 2.3e+03 2.8 0.0 55 76 93 114 88 117 0.86 4 10 0.5 2.3e+03 2.8 0.0 55 76 129 150 124 153 0.86 5 10 0.5 2.3e+03 2.8 0.0 55 76 165 186 160 189 0.86 6 10 0.5 2.3e+03 2.8 0.0 55 76 201 222 196 225 0.86 7 10 0.52 2.3e+03 2.8 0.0 55 76 237 258 232 260 0.86 8 10 0.53 2.4e+03 2.8 0.0 55 76 273 294 269 297 0.86 9 10 0.28 1.2e+03 3.7 0.0 54 76 308 330 304 333 0.86 10 10 0.66 3e+03 2.4 0.0 55 76 345 366 340 368 0.85
Sequence Information
- Coding Sequence
- ATGTACAGAGCACCAATTAACGGCTGGCTGCGCTCAGTATGGGTCGGGTTGAGCGTACTGTACCGTCGTGATGTTCCATTCCCAGACTTGAAACTCCTACTTCTATGGATGTACAGAGCACCAATTAACGGCTGGCTGCGCTCAGTATGGGTCGGGTTGAGAGTACTGTACCGTCGTGATGTTCCATTCCCAGACTTGAAACTCCTACTTCTATGGATGTACAGAGCACCAATTAACGGCTGGCTGCGCTCAGTATGGGTCGGGTTGAGAGTACTGTACCGTCGTGATGTTCCATTCCCAGACTTGAAACTCCTACTTCTATGGATGTACAGAGCACCAATTAACGGCTGGCTGCGCTCAGTATGGGTCGGGTTGAGAGTACTGTACCGTCGTGATGTTCCATTCCCAGACTTGAAACTCCTACTTCTATGGATGTACAGAGCACCAATTAACGGCTGGCTGCGCTCAGTATGGGTCGGGTTGAGAGTACTGTACCGTCGTGATGTTCCATTCCCAGACTTGAAACTCCTACTTCTATGGATGTACAGAGCACCAATTAACGGCTGGCTGCGCTCAGTATGGGTCGGGTTGAGAGTACTGTACCGTCGTGATGTTCCATTCCCAGACTTGAAACTCCTACTTCTATGGATGTACAGAGCACCAATTAACGGCTGGCTGCGCTCAGTATGGGTCGGCTTGAGAGTACTGTACCGTCGTGATGTTCCATTCCCAGACTTGAAACTCCTACTTCTATGGATGTACAGAGCACCAATTAACGGCTGGCTGCTCTCAGTATGGGTCGGGTTGAGAGTACTTTACCGTCGTGATGTTCCATTCCCAGACTTGAAACTCCTACTTCTATGGATGTACAGAGCACCAATTAACGGCTGGCTGCGCTCAGTATGGGTCGGGTTGAGAGTACTGTACCGTCGTGATGTTCCATTCTCAGACTTGAAACTCCTACTTCTATGGATGTACAGAGCACCAATTAACGGCTGGCTGCGCTCAGTATGGGTCGGGTTGAGAGTACTGTACCGTCGTGATGTTCCATTCCCAGACTTGAAACTGCTACTTCTATGGATGTACAGAGCACCAATTTATCTGTGA
- Protein Sequence
- MYRAPINGWLRSVWVGLSVLYRRDVPFPDLKLLLLWMYRAPINGWLRSVWVGLRVLYRRDVPFPDLKLLLLWMYRAPINGWLRSVWVGLRVLYRRDVPFPDLKLLLLWMYRAPINGWLRSVWVGLRVLYRRDVPFPDLKLLLLWMYRAPINGWLRSVWVGLRVLYRRDVPFPDLKLLLLWMYRAPINGWLRSVWVGLRVLYRRDVPFPDLKLLLLWMYRAPINGWLRSVWVGLRVLYRRDVPFPDLKLLLLWMYRAPINGWLLSVWVGLRVLYRRDVPFPDLKLLLLWMYRAPINGWLRSVWVGLRVLYRRDVPFSDLKLLLLWMYRAPINGWLRSVWVGLRVLYRRDVPFPDLKLLLLWMYRAPIYL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -