Msep244298.1
Basic Information
- Insect
- Magicicada septendecula
- Gene Symbol
- lrrfip2_1
- Assembly
- GCA_034769895.1
- Location
- CM068374.1:395051124-395098722[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 8e-72 8.6e-67 229.7 59.8 1 271 9 287 9 301 0.81 2 3 3 3.2e+05 -34.3 38.6 136 136 317 317 275 392 0.58 3 3 1.1e-24 1.2e-19 74.9 1.9 223 300 652 725 632 725 0.90
Sequence Information
- Coding Sequence
- ATGAGCCATGTATATATTTTGCAGGCAGAGGCAAGGTTGGCTGCCAAAAGGCAGGCTAGAGCAGAGGCAAGGGAAATCAGGATGCGAGAGTTGGAGCGACAACAGCGTGAAGCTGAGGAGACTTCGGATAAAGTCTATGACATGTACTCTACACCGGAGACGGTGAATAGGTCTGTACGGTCTGTCGCTAGTCCGCGGTCTTCATCTCTGCTTTCTGGCGCCAACAGCTACCATTCCTCGAGACGAAGTTCAGAGGATTCTTTGGAGGATGGCGGTAGTTTACGTGATGTTAGGCATGAACTCAAGGAGTTGGAGGAGAAGTTTAGGAAGGCGATGATAGCCAATGCTCAACTCGACAATGAGAAGGCTGCAGTCGCTTACCAAGTAGAATTGTATAAAGACAGGTTCGAAGAATTAGAAGAACAACATTCTCAATTACAGAGAGAACATAAGGAGAAGTGTAGACAATTGGATCAATTGAAGCGGGTAACAACTAAACTAGAGGAGGACCTGGAGTGGACGCGTGCACAACTCGAAGAACGTGATAGGCTTATTCAGGAACAAGGATTAGTAATAGTTGGTGGTGAATGCTCGTCATCCGAAGAAGACAGTAGTGAaggtaatgataaagaaaaagttAAGAAAATGCCGAAACGAGCGTTAGTTTCTGCACAAGTAGCTGGTCTTTTAGAAACTGGAGAAGGCTCACTAGaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagattattattatGAATTTATTCGTAAAGGTGGTTCTGTGATTACTACACAGCGTGCATTTCGTATTTGGTTCACACTTGGCCGACATGAGTCTGTTCCGGATAGAAAATCAGTTCATGTTTGGGTATCGAACTTTAGAGCAACAGGTTCAGCATTAAAAAGAAAATCTTGTGGCCGACCTCGGACTGTAACAACGCCGGACAATGTGGCACGTGTGAGAGCTTCCGTCCTGCAATCTCCAAAGCGTTCAGCAGTGAAACACGCAGCTTCCCTGGGCCTGTCTGATCGGAGTGCTCACTTCCACTTGGCAGGCACTGTAAATAAGCAAAATTTTCGGTACTGGGCTGAAGGTAACCCTCGAGAACTTCACCAGCGACCACTTCACAGCCCTCATGTTACTGTTTGGTGTGGCATTGCCGAATTTGGTGTGTGGGGTCCGTACTTTTTTGAAGAAGATGGTCAGGCAGTAACGGTTAATTCCAATCGCTACTGTCACATGTTACAAACTTTCCTCCAGCCCAAGTTTAACCAATTCGTTGAGGACCATGAAGGAGAAGTCTGGTTCCAACAAGACGGAGCTACAGCCCACACTGCTCGGCGTTTTCGAGAAATTCTGAGAGAATTGTTTCCTGGGCGTCTGCTCTCCTTGCACGGTGACATTGCCTGGCCCCCAAGGTCGCCAGGTTTGACGCCTTGTGATTATTTCCTTTGGGGATATTTAAAGGCACAAGTGTACAAACATCGCCCTAGGACCATGGGAGCTCTTAAGGAGGTAATCACCCAGGAAGTTGCTAACATTCCGCCAGAAATGACACGAAGAGCTATGGAAAACTTTCAGGAACGGCTTCGTCAGTGTGTCAATAATGGAGGCCGCCATTTAATGGAcataatttATGTTCGGTTGAAGAAATTCTTAGAAGAAAGAAACGAATTAATGGACGAACTGAGACATGTGAAATTAGAATTAGAAGAAGAAAGGTCTCGTTCCAGAGGACACAGGGTGAACAGTTTGAATGGGCCGCATTCGGACGACATAGAGGATATTCAGAGAGAAGCAAATAAGTTATTAGGTGACTATAAGTTTAAACTTCAGAAAGCAGAACAAGACGTATCAACATTGCAGGCCAATAACATCTGTGGAACTCTGTCAACATTTCAGTATGTCAGAGGTGGTACAGCGTCTAATGAAGATGTGGGTAGTTCTACTATCATGTGGTACCTTGGGAGGATGTAA
- Protein Sequence
- MSHVYILQAEARLAAKRQARAEAREIRMRELERQQREAEETSDKVYDMYSTPETVNRSVRSVASPRSSSLLSGANSYHSSRRSSEDSLEDGGSLRDVRHELKELEEKFRKAMIANAQLDNEKAAVAYQVELYKDRFEELEEQHSQLQREHKEKCRQLDQLKRVTTKLEEDLEWTRAQLEERDRLIQEQGLVIVGGECSSSEEDSSEGNDKEKVKKMPKRALVSAQVAGLLETGEGSLEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEDYYYEFIRKGGSVITTQRAFRIWFTLGRHESVPDRKSVHVWVSNFRATGSALKRKSCGRPRTVTTPDNVARVRASVLQSPKRSAVKHAASLGLSDRSAHFHLAGTVNKQNFRYWAEGNPRELHQRPLHSPHVTVWCGIAEFGVWGPYFFEEDGQAVTVNSNRYCHMLQTFLQPKFNQFVEDHEGEVWFQQDGATAHTARRFREILRELFPGRLLSLHGDIAWPPRSPGLTPCDYFLWGYLKAQVYKHRPRTMGALKEVITQEVANIPPEMTRRAMENFQERLRQCVNNGGRHLMDIIYVRLKKFLEERNELMDELRHVKLELEEERSRSRGHRVNSLNGPHSDDIEDIQREANKLLGDYKFKLQKAEQDVSTLQANNICGTLSTFQYVRGGTASNEDVGSSTIMWYLGRM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -