Msep058597.1
Basic Information
- Insect
- Magicicada septendecula
- Gene Symbol
- tfip11
- Assembly
- GCA_034769895.1
- Location
- CM068367.1:1270469662-1270474140[+]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.9e-96 7.9e-91 308.6 19.0 12 275 3 261 1 261 0.97 2 2 0.098 1.6e+04 -0.7 0.0 244 261 275 292 267 297 0.83
Sequence Information
- Coding Sequence
- ATGTTCCAGCAAAAGTATTATTCAGAATACTGTGCATATGAGCTGTCTTCACTTGCTACTGGTATAGTCCGACCACTTCTGAAGGACAGCTTGTCAGCTTGGTCACCGCTCCAAGAGCCTGAGAAACCAATTCCTGTCTTTCAACAGTGGAAATCCATTCTTGAACAGGATCAGGCACATACATTGTCCGTGTCCAGTTCACAGGATCCTTATCACAGGCTTTTGTGGGATGCATGGATGCCATGTGTTAGAATTGCTGTCAATGCATGGCAGTGCCGTAAATGTGAGCCAATGATAGATTTCCTGGAGAAATGGATTCCAATGATACCTGGATGGATTCTAGAAAATATCTTACAACAGTTGATTCTGCCACGTCTCCAGCATGATGTAGAGGAATGGAACCCTCTCACAGACACATTGCCTATACATACGTGGATACATCCATGGTTACCACTGCTAGGAAAATATTTGAATACTACAATTTTTCCTATTATTCGACACAAACTGAGCTCTGCACTGTTGTCATGGCATCCTTCAGATTGCTCTGCAAGGCTTATGCTTCAGCCTTGGGTTGGTGTTTTTAATAAAGGAGAGATGGATGCATTCCTTATCAATAATATTGTACCTAAGTTACATCTGACTCTTCAAGAGTTTGTGATAAATCCCCATCAACAGCATCTAGATAACTGGAACTGGGTGATGGAATGGGCAGAACTACTACCTGCACATGTGATGGCATCACTTTTGGATAAAAGTTTCTTTCCCAAATGGTTGCAAGTGCTCACATTATGGCTGAATCTTACACCAAATTATGATCAAGTAACAAACTGGTATACAGGATGGAAAAGTATGATATCTGAGCCTCTCATGGCACAGCCTGCTGTCAAAGGTAAGTGTATCTTGTGTAGGTATACAAGATATACATAG
- Protein Sequence
- MFQQKYYSEYCAYELSSLATGIVRPLLKDSLSAWSPLQEPEKPIPVFQQWKSILEQDQAHTLSVSSSQDPYHRLLWDAWMPCVRIAVNAWQCRKCEPMIDFLEKWIPMIPGWILENILQQLILPRLQHDVEEWNPLTDTLPIHTWIHPWLPLLGKYLNTTIFPIIRHKLSSALLSWHPSDCSARLMLQPWVGVFNKGEMDAFLINNIVPKLHLTLQEFVINPHQQHLDNWNWVMEWAELLPAHVMASLLDKSFFPKWLQVLTLWLNLTPNYDQVTNWYTGWKSMISEPLMAQPAVKGKCILCRYTRYT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -