Msep008968.1
Basic Information
- Insect
- Magicicada septendecula
- Gene Symbol
- SMARCC2
- Assembly
- GCA_034769895.1
- Location
- CM068367.1:192126505-192169317[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.7e-15 3e-11 47.3 0.2 3 44 83 124 81 126 0.95 2 2 6.4 1.1e+05 -2.6 0.1 8 18 336 346 334 347 0.84
Sequence Information
- Coding Sequence
- ATGGGCCCGCCACCAACCTCCCATTTCCATGTGTTATCGGACACCCCATCAGGTCTTCAGCCTGTGAACCCACCCAAGACTCCACAACCATCAGCTGCTAAAACATTACTCGATATGGAAAAGAAAGTGGATGGAACACCGAGGAAAACTGATGGTGATCTTGGAACAAACTTTGGTCTTAAACTGGATCAGTATGCACGTAAACCAGCTGTTCTACGTAACAAAACAGCAGCAAGTATGACTCGGGACTGGACTGAACAAGAAACCCTACTTCTGTTAGAAGCTTTAGAGTTGTACAAAGATGATTGGAATAAGGTTTGTGAACATGTTGGGAGTAGAACTCAAGATGAGTGCATACTTCATTTCCTGAGATTACCTATAGAAGATCCTTATCTAGAGGATCATGAAGCAGGAGGTGGTGCTTTAGGACCTTTAGCATATCAGCCCATACCATTCAGTAAAGCAGGCAATCCAATCATGTCAACAGTTGCTTTCTTAGCATCAGTTGTAGATCCAAGGGTTGCTGCCTCTGCGGCAAAAGCAGCTATGGAAGAATTTGCAAACATTaagGATGAAGTACCAGCTGCTTTAATGGATGCTCATATAAAGAATGTAGAAGCATCAACTACAGATGGAAAATTTGATCCTGCAGCCGGGCTTATTCAGAGTGGTATTGCAGGTACTGTCCCTGAGAAGGATGAGGAGGctgaaaaggaaaagaaagaagttgAAGCTCCTAAAGAGGGAGGAGAAGATACTAACAAAACTTCACCACAGGTTGAAGAGGGAGGAGTCGATGTGAAGAAAGAACAGCCAGAGAAATCACAAAGCACACCAGAACCAATGGAAGTTGACAAAAAGGAAGAAACTAACTCATCAGAGGGAGGTGAGACTGTTAAAGAAGAAACAGAAAGGGACAGGTTAGTGAAGGATGGTCAGTTACAGTCTGCAGCTGCTGCTGCATTAGCAGCTGCAGCGGTGAAAGCCAAACATCTTGCAGCAGTTGAAGAAAGAAAAATCAAATCACTAGTAGCTCTGTTAGTGGAAACACAGATGAAAAAACTGGAAATAAAACTAAGGCATTTTGAAGAGCTTGAAACAACGATGGAGAAAGAAAGGGAGGGCTTAGAATATCAGAGACAACAGCTGATACAGGAAAGACAGCAATTTCATTTGGAACAGTTGAAAGCTGCTGAATTCAGAGCCCGTCAGCAAGCTCACCAGCGACTAGCGGCAGAACAACAGCAAACACCGTCTACAACACCAACACCTCCCTCACCACAGGCTGTACCAACTCCACACCAAGCTGCAACCTCACCATCACCAGCTTAG
- Protein Sequence
- MGPPPTSHFHVLSDTPSGLQPVNPPKTPQPSAAKTLLDMEKKVDGTPRKTDGDLGTNFGLKLDQYARKPAVLRNKTAASMTRDWTEQETLLLLEALELYKDDWNKVCEHVGSRTQDECILHFLRLPIEDPYLEDHEAGGGALGPLAYQPIPFSKAGNPIMSTVAFLASVVDPRVAASAAKAAMEEFANIKDEVPAALMDAHIKNVEASTTDGKFDPAAGLIQSGIAGTVPEKDEEAEKEKKEVEAPKEGGEDTNKTSPQVEEGGVDVKKEQPEKSQSTPEPMEVDKKEETNSSEGGETVKEETERDRLVKDGQLQSAAAAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETTMEKEREGLEYQRQQLIQERQQFHLEQLKAAEFRARQQAHQRLAAEQQQTPSTTPTPPSPQAVPTPHQAATSPSPA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00857566;
- 90% Identity
- -
- 80% Identity
- -