Lstr016441.1
Basic Information
- Insect
- Laodelphax striatellus
- Gene Symbol
- Smarcc2
- Assembly
- GCA_014465815.1
- Location
- WOVE01037583.1:31077-38024[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 8.6e-15 1.8e-11 45.3 0.2 3 44 19 60 17 62 0.95 2 3 5.6 1.2e+04 -2.2 0.0 23 40 122 140 120 140 0.86 3 3 6.1 1.3e+04 -2.3 0.1 8 18 250 260 248 261 0.84
Sequence Information
- Coding Sequence
- TACAGCCGCAAGCCGGCGGCGCTGCGCAACAAGACGGCGGCCAGCCTGAGCCGCGACTGGAGCGAGCAGGAGACGCTGCTGCTGCTCGAGGGCCTCGAACTGTACAAGGACGACTGGAACAAGGTGTGCGAGCACGTCGGCACGCGCACCCAGGACGAGTGCATCCTGCACTTTCTGCGGCTGCCCATCGAGGACCCCTACCTGGAGGACCACGAGGCTGGTGGTGGAGCACTGGGCCCACTGGCCTACCAGCCAATACCGTTCAGCAAAGCCGGCAATCCGATCATGTCGACGGTGGCGTTCCTCGCGTCGGTCGTCGATCCCCGAGTGGCCGCCTCGGCTGCCAAAGCCGCCATGGAAGAGTTCGCCAGCATCAAGGATGAAGTTCCGGCTGCCCTGATGGATGCTCATATAAAGAACGTTGAGGCCAACACTGGTGCCGACGGCAAATTCGATCCGGCTGCTGGACTTATTCAGAGCGGTATCGCCGGCACAGTTCCCGAAAAAGAGGAAGAAAGCGGCGAAAAGGCGGAGAAGAAAGATGCCGCTGCCGCCGAGAGCACCACCGAAAAGGAACCGACGGCCGAAGGAGAAGCGATGGATGTCGATGAGAAGAAGGAGAGCGGCGAAGGAGAGGTGAAAGAAGAAACCGAACGTGACCGGATTGTGAAAGACGCTCAGCTGCAGTCGGCAGCCGCTGCCGCGTTGGCTGCAGCCGCGGTCAAGGCTAAACATCTAGCAGCCGTCGAAGAGCGCAAGATCAAATCGTTGGTGGCGTTGTTGGTCGAAACGCAAATGAAGAAGCTGGAAATCAAGCTGCGGCACTTTGAAGAGCTGGAAACGACCATGGAGCGTGAACGCGAGGGCTTGGAGTACCAGAGGCAGCAGTTGATTCAGGAGCGACAACAGTTTCACTTGGAACAGCTGAAGGCGGCCGAATTCCGCGCCAGACAGCAGGCGCATCAGCGATTGGCCGCTGAACAGCAGCAGACCACGCCCTCGACCACGCCCACCCCTCCCTCCCCTCAGGCGGTGCCCACCCCCCAGCAGGCGGCTACCTCTCCTTCGCCCGCCTGA
- Protein Sequence
- YSRKPAALRNKTAASLSRDWSEQETLLLLEGLELYKDDWNKVCEHVGTRTQDECILHFLRLPIEDPYLEDHEAGGGALGPLAYQPIPFSKAGNPIMSTVAFLASVVDPRVAASAAKAAMEEFASIKDEVPAALMDAHIKNVEANTGADGKFDPAAGLIQSGIAGTVPEKEEESGEKAEKKDAAAAESTTEKEPTAEGEAMDVDEKKESGEGEVKEETERDRIVKDAQLQSAAAAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETTMEREREGLEYQRQQLIQERQQFHLEQLKAAEFRARQQAHQRLAAEQQQTTPSTTPTPPSPQAVPTPQQAATSPSPA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01372589; iTF_00945265;
- 90% Identity
- -
- 80% Identity
- -