Msep046612.1
Basic Information
- Insect
- Magicicada septendecula
- Gene Symbol
- clz9
- Assembly
- GCA_034769895.1
- Location
- CM068367.1:1011115513-1011117015[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.5e-12 2.4e-10 43.9 0.0 1 35 18 53 18 59 0.93
Sequence Information
- Coding Sequence
- ATGCCGAGAAATCCCAAACGTGTTCTTGGAACATGGCCATACAGGAATTACACAGAAGAAAGTTTGAACGAGGCCTTGCAAGCCATCAAAAACAAAACTTTGTCTATTCGCCAAGCAGCATCAAAATTTGGCATTCCGAAAAACACCTTGCACCTGAAGAGCCAGGAAAAACACTCCAATCCTGTGGGCCGGGCTTCTGTTTTTACAAATGAGGAGGAGCTGCAATTCGTGGGTCACATTATTGCCGTGTCAAACTACGGATTCCCTGTGGATACGGTCGACCTTCGATGCATCGTCAAGTCCTACCTGGACCGCTGTGGGAAGAAGGAGGTGCGTTTTAAAAACAACTACCCAGGAAAAGATTGGGCGGAGGGATTTTTGAAACGACATAAAGCAGTGTTAACCCAGAGAACCGTGAAAAACATTTCTCACTCAAGAGCAGCGACAGATGAAGAGGTCGTGAACAATTTTTTCGATAATTTGGAACACGAGCTGAGCGGAATTCCTCCCACAAACGTCTATAACTATGACGAAACAAACCTTGTCGACGATCCTGGCACCGGAAAAATTATCACAAAGAGGGGAACCAAGTACCCTGAGAGGATCCAAAATTCGTCAAAGGCGTGCACATCAATCATGGTGTGCGGAAATGCAGCAGGGGATATGGTGCCACCTTACGTAAACTACAAGGCAGAGAAGATTTGGACAACCTGGACCGAAAATGGTCCCTCCGGAGCGCGGTACAACAGGACCAAATCAGGTTGGTTTGATGGGAACACCTTCGAGGATTGGTTTAAATCGTTACTGTTGCCTATCGTGAAGCGCCAGGAAGGACCGAAGGCCATTATCGGCGATAACCTTAGTTCCCACATCAACATTGAGGTACTGCGGCTTTGCAAGGAAAACAACATAAAGTTCATAGCCCTTCCACCGAACACTACGCATCTCCTGCAGCCATTGGACGTGGCATACTTTCGCCCGATGAAAGGTGCCTGGCGAAAAGTACTTAAAGAGTGGAAAGAGACGGCCGCTGGAAGTCGGTGTACGACTGTGCCAAAGGAACAATTTCCCACACTGCTGAAGAAACTCTGGGATAGCCTGCACACGGGTCCAGACAACTTGATCGCCGGGTTCCGCAAGTCGGGAATTTATCCTACTGACAGACAGCCGATCCTGAAAAGGTTGCCTTCGCAGAGCCTGGATTCGTCCGTTTCTTCCGTCGTCGGGGAGAGCTTCTTAGAACAGATTACTAAGAAGCGGGAAGAAGCGACCAAATGCCGTCATCAAACCAACAGAAGGAAGAAGCTGAACGTCCCCCCGGGAAAAAGTATTTCAGCGGAGGAACTTGAAGCTGAAGCGGCATCTGAACCCCAACCATCAACACAAACGGTGCGCGAGCACGACAGCGAGTACCGCAGCAGAAGAGACCAAGAAGAAAGAGCAGCAGCACCAGCAATGATGGGAGCACTGATTTATCGTTACAAGACACTGATGACAGCATGA
- Protein Sequence
- MPRNPKRVLGTWPYRNYTEESLNEALQAIKNKTLSIRQAASKFGIPKNTLHLKSQEKHSNPVGRASVFTNEEELQFVGHIIAVSNYGFPVDTVDLRCIVKSYLDRCGKKEVRFKNNYPGKDWAEGFLKRHKAVLTQRTVKNISHSRAATDEEVVNNFFDNLEHELSGIPPTNVYNYDETNLVDDPGTGKIITKRGTKYPERIQNSSKACTSIMVCGNAAGDMVPPYVNYKAEKIWTTWTENGPSGARYNRTKSGWFDGNTFEDWFKSLLLPIVKRQEGPKAIIGDNLSSHINIEVLRLCKENNIKFIALPPNTTHLLQPLDVAYFRPMKGAWRKVLKEWKETAAGSRCTTVPKEQFPTLLKKLWDSLHTGPDNLIAGFRKSGIYPTDRQPILKRLPSQSLDSSVSSVVGESFLEQITKKREEATKCRHQTNRRKKLNVPPGKSISAEELEAEAASEPQPSTQTVREHDSEYRSRRDQEERAAAPAMMGALIYRYKTLMTA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00943649; iTF_00943752; iTF_01384551; iTF_00306858; iTF_01384552; iTF_00943659; iTF_00944240; iTF_00943642;
- 90% Identity
- iTF_00943667;
- 80% Identity
- -